CsaV3_7G033690 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G033690
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Golgin family A protein
Location	chr7: 21230159 .. 21230950 (-)
RNA-Seq Expression	CsaV3_7G033690
Synteny	CsaV3_7G033690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGGATATAGTTCGTGCGTCTAGTCGAGGTTTAAAAATGGTTGTTGTTTTTGCCGGTTCCACGAGTCTGTGTTTGCCGGGAAATGCTTTAGCGGCGGCATGCGTGCGGAGAAGACGAAGCCAGGGAATTACTATAAGAAGCGAGGCAGAAGGGAAAAATCCGGTTCCAGGTAGAGACCGGGTGATAGGGTTTGGAAAACACAAGGGCAAAATGCTTGGAACCCTTCCTTCAACCTATCTGAAATGGATCTCCAAAAACCTTCGAGCAAGAGAGTTCGAAGAGTGGGCGATTTTAGCAGACCAAGTTCTGGAAGACCCGATTTACCAAGACCGGGTCCAGTGGGAGTTCGCTCACAACGTTTTGACCGGCGCTGGTCGGAGTGGCCGTGACAACGTCGTTTCTGAGTTGTCGGAGATCAGTGACCGGTTTGGCTGGGATTGGGATAATAAATCCGGTTGGAGAGGTGTGGATTTTGAGCTCTTGGGGACCTCGAAAGGTGGAAGAATTCCACGGCGAATTGAACCAACTCAGAAATCGGAATCGAAGACTGCGCAAAATGTATCAGGTGGCGGCGGCGGCGGCGGCGGAAGGAGGAGGGAGAGAAGAGATCGGTTGAGAGAGAAGCGAGAGAAATCGACGGGAGGCGGCGAGAAAAGTGAAAGGAAAACGGAGATTGAGAATCCCGTTCCCAGGTTTAACAATCCCTTCCCTGGCCGTCAAGCTCTTCTAAAACGGGTTGCCACAATTAAATCAGATTTGTTAGTTAAAAAGAAACCCAATTCCTAA

mRNA sequence

ATGGATTTGGATATAGTTCGTGCGTCTAGTCGAGGTTTAAAAATGGTTGTTGTTTTTGCCGGTTCCACGAGTCTGTGTTTGCCGGGAAATGCTTTAGCGGCGGCATGCGTGCGGAGAAGACGAAGCCAGGGAATTACTATAAGAAGCGAGGCAGAAGGGAAAAATCCGGTTCCAGGTAGAGACCGGGTGATAGGGTTTGGAAAACACAAGGGCAAAATGCTTGGAACCCTTCCTTCAACCTATCTGAAATGGATCTCCAAAAACCTTCGAGCAAGAGAGTTCGAAGAGTGGGCGATTTTAGCAGACCAAGTTCTGGAAGACCCGATTTACCAAGACCGGGTCCAGTGGGAGTTCGCTCACAACGTTTTGACCGGCGCTGGTCGGAGTGGCCGTGACAACGTCGTTTCTGAGTTGTCGGAGATCAGTGACCGGTTTGGCTGGGATTGGGATAATAAATCCGGTTGGAGAGGTGTGGATTTTGAGCTCTTGGGGACCTCGAAAGGTGGAAGAATTCCACGGCGAATTGAACCAACTCAGAAATCGGAATCGAAGACTGCGCAAAATGTATCAGGTGGCGGCGGCGGCGGCGGCGGAAGGAGGAGGGAGAGAAGAGATCGGTTGAGAGAGAAGCGAGAGAAATCGACGGGAGGCGGCGAGAAAAGTGAAAGGAAAACGGAGATTGAGAATCCCGTTCCCAGGTTTAACAATCCCTTCCCTGGCCGTCAAGCTCTTCTAAAACGGGTTGCCACAATTAAATCAGATTTGTTAGTTAAAAAGAAACCCAATTCCTAA

Coding sequence (CDS)

ATGGATTTGGATATAGTTCGTGCGTCTAGTCGAGGTTTAAAAATGGTTGTTGTTTTTGCCGGTTCCACGAGTCTGTGTTTGCCGGGAAATGCTTTAGCGGCGGCATGCGTGCGGAGAAGACGAAGCCAGGGAATTACTATAAGAAGCGAGGCAGAAGGGAAAAATCCGGTTCCAGGTAGAGACCGGGTGATAGGGTTTGGAAAACACAAGGGCAAAATGCTTGGAACCCTTCCTTCAACCTATCTGAAATGGATCTCCAAAAACCTTCGAGCAAGAGAGTTCGAAGAGTGGGCGATTTTAGCAGACCAAGTTCTGGAAGACCCGATTTACCAAGACCGGGTCCAGTGGGAGTTCGCTCACAACGTTTTGACCGGCGCTGGTCGGAGTGGCCGTGACAACGTCGTTTCTGAGTTGTCGGAGATCAGTGACCGGTTTGGCTGGGATTGGGATAATAAATCCGGTTGGAGAGGTGTGGATTTTGAGCTCTTGGGGACCTCGAAAGGTGGAAGAATTCCACGGCGAATTGAACCAACTCAGAAATCGGAATCGAAGACTGCGCAAAATGTATCAGGTGGCGGCGGCGGCGGCGGCGGAAGGAGGAGGGAGAGAAGAGATCGGTTGAGAGAGAAGCGAGAGAAATCGACGGGAGGCGGCGAGAAAAGTGAAAGGAAAACGGAGATTGAGAATCCCGTTCCCAGGTTTAACAATCCCTTCCCTGGCCGTCAAGCTCTTCTAAAACGGGTTGCCACAATTAAATCAGATTTGTTAGTTAAAAAGAAACCCAATTCCTAA

Protein sequence

MDLDIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSGRDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVATIKSDLLVKKKPNS*

Homology

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BLAST of CsaV3_7G033690 vs. NCBI nr
Match: XP_004141831.3 (uncharacterized protein LOC101215921 [Cucumis sativus] >KGN45413.1 hypothetical protein Csa_015718 [Cucumis sativus])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MDLDIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGR 60
           MDLDIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGR
Sbjct: 1   MDLDIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGR 60

Query: 61  DRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAH 120
           DRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAH
Sbjct: 61  DRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAH 120

Query: 121 NVLTGAGRSGRDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQK 180
           NVLTGAGRSGRDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQK
Sbjct: 121 NVLTGAGRSGRDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQK 180

Query: 181 SESKTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPG 240
           SESKTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPG
Sbjct: 181 SESKTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPG 240

Query: 241 RQALLKRVATIKSDLLVKKKPNS 264
           RQALLKRVATIKSDLLVKKKPNS
Sbjct: 241 RQALLKRVATIKSDLLVKKKPNS 263

[Close]

BLAST of CsaV3_7G033690 vs. NCBI nr
Match: XP_008462203.1 (PREDICTED: uncharacterized protein LOC103500617 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 2.3e-123
Identity = 229/248 (92.34%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKML 74
           MV VFAGSTSLCLPGNA AAACV RRRS+G TIRSEAEG+NP+PGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 75  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSGRDNV 134
           GTLPSTYLKWISKNLRAREFEEWAILADQVLEDP+YQDRVQWEFAHNVLTGAGRSGRD+V
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 135 VSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVSGGGG 194
           VSELSEISDRFGWDWDNKSGWR VDFELLGTSKGGRIPRRIEPTQ SE KTA+NVS  GG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS--GG 180

Query: 195 GGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVATIKSD 254
           GGGGRRRERRDRLREKREKS GGGEKSE KTE ENPVPRFNNPFPGRQALLKRV TIKSD
Sbjct: 181 GGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSD 240

Query: 255 LLVKKKPN 263
           LLVKKKPN
Sbjct: 241 LLVKKKPN 246

[Close]

BLAST of CsaV3_7G033690 vs. NCBI nr
Match: KAA0059334.1 (uncharacterized protein E6C27_scaffold242G00590 [Cucumis melo var. makuwa] >TYK03991.1 uncharacterized protein E5676_scaffold347G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKML 74
           MV VFAGSTSLCLPGNA AAACV RRRS+G TIRSEAEG+NP+PGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 75  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSGRDNV 134
           GTLPSTYLKWISKNLRAREFEEWA LADQVLEDP+YQDRVQWEFAHNVLTGAGRSGRD+V
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 135 VSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVSGGGG 194
           VSELSEISDRFGWDWDNKSGWR VDFELLGTSKGGRIPRRIEPTQ SE KTA+NVS  GG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS--GG 180

Query: 195 GGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVATIKSD 254
           GGGGRRRERRDRLREKREKS GGGEKSE KTE ENPVPRFNNPFPGRQALLKRV TIKSD
Sbjct: 181 GGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSD 240

Query: 255 LLVKKKPN 263
           LLVKKKPN
Sbjct: 241 LLVKKKPN 246

[Close]

BLAST of CsaV3_7G033690 vs. NCBI nr
Match: XP_038898819.1 (uncharacterized protein LOC120086315 [Benincasa hispida])

HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106
Identity = 202/254 (79.53%), Postives = 216/254 (85.04%), Query Frame = 0


Query: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGI--TIRSEAEG--KNPVPGRDRVIGFGKHK 74
           MV + AGST LCL G  LAA C+ RRRS GI   IRSEAEG  +N VPGRDRV+GFGKHK
Sbjct: 1   MVCILAGSTGLCLQGKTLAAVCMWRRRSDGIRNKIRSEAEGENENTVPGRDRVMGFGKHK 60

Query: 75  GKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSG 134
           GKMLGTLPSTYLKW+SKNLRAREFEEWAILADQVLEDP+YQDR+QWEFAHN+LTGAGR+G
Sbjct: 61  GKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNILTGAGRTG 120

Query: 135 RDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVS 194
           RD+VVSEL EISDRFGWDW+NKSGWR V+FELLGTSKGGRIPRRIE TQKSESKT  NVS
Sbjct: 121 RDDVVSELLEISDRFGWDWENKSGWRDVEFELLGTSKGGRIPRRIESTQKSESKTTDNVS 180

Query: 195 G-GGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVA 254
              GGGGGGRRRERR+RLR KREKS G  EKSE KTE ENP PRFNNPFPGRQ LL R  
Sbjct: 181 SCAGGGGGGRRRERRNRLRVKREKSKGAEEKSEVKTETENPTPRFNNPFPGRQTLLNRFT 240

Query: 255 TIKSDLLVKKKPNS 264
           T KS L +KK PNS
Sbjct: 241 TTKSHLFIKKDPNS 254

[Close]

BLAST of CsaV3_7G033690 vs. NCBI nr
Match: XP_022992375.1 (uncharacterized protein LOC111488702 [Cucurbita maxima])

HSP 1 Score: 282.0 bits (720), Expect = 5.5e-72
Identity = 161/247 (65.18%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 24  SLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKMLGTLPSTYLK 83
           SLCL   AL   C  R    GI  R+     NP+P RDRVIGFG+HKGKMLG LPS+YLK
Sbjct: 2   SLCLQAKAL-PVCAWRSDGDGIRNRAPPT-PNPIPPRDRVIGFGRHKGKMLGALPSSYLK 61

Query: 84  WISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVL---TGAGRSGRDNVVSELSE 143
           WISKNLRAR+ EEWAILADQVLEDP+YQDR+QWEFAHN+L   TG G + RD VVSEL E
Sbjct: 62  WISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGTARDGVVSELLE 121

Query: 144 ISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVS-GGGGGGGGR 203
           ISDRFGWDWD   GWR V+FELLGTSKGGRIPRR EP       TAQ VS GGGGGGGGR
Sbjct: 122 ISDRFGWDWDG-GGWRDVNFELLGTSKGGRIPRRAEP-------TAQKVSPGGGGGGGGR 181

Query: 204 RRERRDRLREKREKSTGGGEKSERKTE----------IENPVPRFNNPFPGRQALLKRVA 257
           R ERR+RLR KREKS G  E+SE K E           +NPV   N  FPGRQ LL R  
Sbjct: 182 RSERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFT 238

[Close]

BLAST of CsaV3_7G033690 vs. ExPASy TrEMBL
Match: A0A0A0K7H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.2e-145
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MDLDIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGR 60
           MDLDIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGR
Sbjct: 1   MDLDIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGR 60

Query: 61  DRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAH 120
           DRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAH
Sbjct: 61  DRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAH 120

Query: 121 NVLTGAGRSGRDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQK 180
           NVLTGAGRSGRDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQK
Sbjct: 121 NVLTGAGRSGRDNVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQK 180

Query: 181 SESKTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPG 240
           SESKTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPG
Sbjct: 181 SESKTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPG 240

Query: 241 RQALLKRVATIKSDLLVKKKPNS 264
           RQALLKRVATIKSDLLVKKKPNS
Sbjct: 241 RQALLKRVATIKSDLLVKKKPNS 263

[Close]

BLAST of CsaV3_7G033690 vs. ExPASy TrEMBL
Match: A0A1S3CGX9 (uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.1e-123
Identity = 229/248 (92.34%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKML 74
           MV VFAGSTSLCLPGNA AAACV RRRS+G TIRSEAEG+NP+PGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 75  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSGRDNV 134
           GTLPSTYLKWISKNLRAREFEEWAILADQVLEDP+YQDRVQWEFAHNVLTGAGRSGRD+V
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 135 VSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVSGGGG 194
           VSELSEISDRFGWDWDNKSGWR VDFELLGTSKGGRIPRRIEPTQ SE KTA+NVS  GG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS--GG 180

Query: 195 GGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVATIKSD 254
           GGGGRRRERRDRLREKREKS GGGEKSE KTE ENPVPRFNNPFPGRQALLKRV TIKSD
Sbjct: 181 GGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSD 240

Query: 255 LLVKKKPN 263
           LLVKKKPN
Sbjct: 241 LLVKKKPN 246

[Close]

BLAST of CsaV3_7G033690 vs. ExPASy TrEMBL
Match: A0A5D3BWA7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001890 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.6e-123
Identity = 228/248 (91.94%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 15  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKML 74
           MV VFAGSTSLCLPGNA AAACV RRRS+G TIRSEAEG+NP+PGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 75  GTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGAGRSGRDNV 134
           GTLPSTYLKWISKNLRAREFEEWA LADQVLEDP+YQDRVQWEFAHNVLTGAGRSGRD+V
Sbjct: 61  GTLPSTYLKWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGAGRSGRDDV 120

Query: 135 VSELSEISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVSGGGG 194
           VSELSEISDRFGWDWDNKSGWR VDFELLGTSKGGRIPRRIEPTQ SE KTA+NVS  GG
Sbjct: 121 VSELSEISDRFGWDWDNKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVS--GG 180

Query: 195 GGGGRRRERRDRLREKREKSTGGGEKSERKTEIENPVPRFNNPFPGRQALLKRVATIKSD 254
           GGGGRRRERRDRLREKREKS GGGEKSE KTE ENPVPRFNNPFPGRQALLKRV TIKSD
Sbjct: 181 GGGGRRRERRDRLREKREKSKGGGEKSEGKTENENPVPRFNNPFPGRQALLKRVTTIKSD 240

Query: 255 LLVKKKPN 263
           LLVKKKPN
Sbjct: 241 LLVKKKPN 246

[Close]

BLAST of CsaV3_7G033690 vs. ExPASy TrEMBL
Match: A0A6J1JVI9 (uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.6e-72
Identity = 161/247 (65.18%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 24  SLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKMLGTLPSTYLK 83
           SLCL   AL   C  R    GI  R+     NP+P RDRVIGFG+HKGKMLG LPS+YLK
Sbjct: 2   SLCLQAKAL-PVCAWRSDGDGIRNRAPPT-PNPIPPRDRVIGFGRHKGKMLGALPSSYLK 61

Query: 84  WISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVL---TGAGRSGRDNVVSELSE 143
           WISKNLRAR+ EEWAILADQVLEDP+YQDR+QWEFAHN+L   TG G + RD VVSEL E
Sbjct: 62  WISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGTARDGVVSELLE 121

Query: 144 ISDRFGWDWDNKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVS-GGGGGGGGR 203
           ISDRFGWDWD   GWR V+FELLGTSKGGRIPRR EP       TAQ VS GGGGGGGGR
Sbjct: 122 ISDRFGWDWDG-GGWRDVNFELLGTSKGGRIPRRAEP-------TAQKVSPGGGGGGGGR 181

Query: 204 RRERRDRLREKREKSTGGGEKSERKTE----------IENPVPRFNNPFPGRQALLKRVA 257
           R ERR+RLR KREKS G  E+SE K E           +NPV   N  FPGRQ LL R  
Sbjct: 182 RSERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFT 238

[Close]

BLAST of CsaV3_7G033690 vs. ExPASy TrEMBL
Match: A0A6J1GQE9 (uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC111456149 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 3.2e-70
Identity = 160/252 (63.49%), Postives = 178/252 (70.63%), Query Frame = 0


Query: 24  SLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKMLGTLPSTYLK 83
           SLCL   AL    V   RS GI  R+ A   NP+P RDRVIGFG+HKGKMLG LPS+YLK
Sbjct: 2   SLCLQAKALP---VCAWRSDGIRNRA-APSPNPIPPRDRVIGFGRHKGKMLGALPSSYLK 61

Query: 84  WISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGA-GR--SGRDNVVSELSE 143
           WISKNLRAR+ EEWAILADQVLEDP+YQDR+QWEFAHN+L+G  GR  +GRD VVSEL E
Sbjct: 62  WISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGRRGTGRDGVVSELLE 121

Query: 144 ISDRFGWDWD---NKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVS---GGGG 203
           ISDRFGWDWD   +  GWR V+FELLGTSKGGRIPRR +P       TAQ VS   GGG 
Sbjct: 122 ISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDP-------TAQKVSPGGGGGS 181

Query: 204 GGGGRRRERRDRLREKREKSTGGGEKSER----------KTEIENPVPRFNNPFPGRQAL 257
           GGGG+R ERRDRLR KREKS G  E+SE           K + +NPV   N  FPGRQ L
Sbjct: 182 GGGGKRSERRDRLRVKREKSKGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTL 241

[Close]

BLAST of CsaV3_7G033690 vs. TAIR 10
Match: AT1G51080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-44
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 0


Query: 60  RDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFA 119
           RD +I FGKHKGKMLGTLPS+YLKW+SKNLRA  FE WA LAD+VLED +Y+DR +WEFA
Sbjct: 64  RDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAGVFEYWAKLADEVLEDDVYKDRTEWEFA 123

Query: 120 HNVLTGAGRSGRD-----------NVVSELSEISDRFGWDWDNKSGWRGVDFELLGTSKG 179
             +L G+  S R            N VS L EIS+RFGWD ++K GW  ++FELLGTSKG
Sbjct: 124 EKILHGSDESMRALTSVRKSREEVNSVSMLLEISERFGWDNEDKIGWSKINFELLGTSKG 183

Query: 180 GRIPRRIEPTQKSES-------KTAQNVSGGGGGGGGRRRERRDRLREKREKSTGGG-EK 239
           GRIPR  +  ++ E        +  +         G RR++RR+R+R+   +  G    +
Sbjct: 184 GRIPRLRKANEEEEERGEMVRRREIKKKEEEEDENGWRRKQRRERMRQSLGRDDGKTVNR 243

Query: 240 SERK------TEIENPV-PRFNNPFPGRQALLKRV 249
           SE+K       ++E  + P+  +PFPGR++LLK+V
Sbjct: 244 SEQKGVLGKLEDVEKQLEPKIQSPFPGRESLLKKV 278

The following BLAST results are available for this feature:

BLAST of CsaV3_7G033690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141831.3	1.1e-144	100.00	uncharacterized protein LOC101215921 [Cucumis sativus] >KGN45413.1 hypothetical ...	[more]
XP_008462203.1	2.3e-123	92.34	PREDICTED: uncharacterized protein LOC103500617 [Cucumis melo]	[more]
KAA0059334.1	1.2e-122	91.94	uncharacterized protein E6C27_scaffold242G00590 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_038898819.1	3.4e-106	79.53	uncharacterized protein LOC120086315 [Benincasa hispida]	[more]
XP_022992375.1	5.5e-72	65.18	uncharacterized protein LOC111488702 [Cucurbita maxima]	[more]

BLAST of CsaV3_7G033690 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G033690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7H6	5.2e-145	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1	[more]
A0A1S3CGX9	1.1e-123	92.34	uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=...	[more]
A0A5D3BWA7	5.6e-123	91.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1JVI9	2.6e-72	65.18	uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702...	[more]
A0A6J1GQE9	3.2e-70	63.49	uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]

BLAST of CsaV3_7G033690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51080.1	5.1e-44	46.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..240
None	No IPR available	PANTHER	PTHR38357	EXPRESSED PROTEIN	coord: 35..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G033690.1	CsaV3_7G033690.1	mRNA