CsaV3_7G033050 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G033050
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionthionin-like protein 2
Locationchr7: 20817886 .. 20818068 (-)
RNA-Seq ExpressionCsaV3_7G033050
SyntenyCsaV3_7G033050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCAGCAATATGGGAATGAAATGTGCTTTAACTGCTTGGCTATTCCTGAGCTTGCTCTCCATGGCCAATTCTTATACCTCTTTCCAAGACTGTTACGGCACCTGCGTCGTCACCTGCGCCGTCACACCCGGCATTCCTGTCTCCGAATGCCTCAAGAGATGCTTCAAAACTTGCTGA

mRNA sequence

ATGGAGAGCAGCAATATGGGAATGAAATGTGCTTTAACTGCTTGGCTATTCCTGAGCTTGCTCTCCATGGCCAATTCTTATACCTCTTTCCAAGACTGTTACGGCACCTGCGTCGTCACCTGCGCCGTCACACCCGGCATTCCTGTCTCCGAATGCCTCAAGAGATGCTTCAAAACTTGCTGA

Coding sequence (CDS)

ATGGAGAGCAGCAATATGGGAATGAAATGTGCTTTAACTGCTTGGCTATTCCTGAGCTTGCTCTCCATGGCCAATTCTTATACCTCTTTCCAAGACTGTTACGGCACCTGCGTCGTCACCTGCGCCGTCACACCCGGCATTCCTGTCTCCGAATGCCTCAAGAGATGCTTCAAAACTTGCTGA

Protein sequence

MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC*
Homology
BLAST of CsaV3_7G033050 vs. NCBI nr
Match: KGN45342.1 (hypothetical protein Csa_016718 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60
          MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC
Sbjct: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60

BLAST of CsaV3_7G033050 vs. NCBI nr
Match: XP_038899383.1 (thionin-like protein 2 [Benincasa hispida])

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-08
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          M  K AL AWL LS LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 1  MAKKWALIAWLLLSSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 54

BLAST of CsaV3_7G033050 vs. NCBI nr
Match: XP_011659556.1 (thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_016713 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          +  K AL AWL L+ LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 5  LAKKWALMAWLLLTSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 58

BLAST of CsaV3_7G033050 vs. NCBI nr
Match: XP_008461039.1 (PREDICTED: thionin-like protein 2 [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          +  K AL AWL L+ LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 5  LAKKWALMAWLLLTSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 58

BLAST of CsaV3_7G033050 vs. NCBI nr
Match: XP_022953260.1 (thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein 2 [Cucurbita moschata])

HSP 1 Score: 64.3 bits (155), Expect = 4.1e-07
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 9  KCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          K  L AWL LS L+ ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 7  KLGLMAWLVLSSLTTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 57

BLAST of CsaV3_7G033050 vs. ExPASy TrEMBL
Match: A0A0A0KAC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441620 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60
          MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC
Sbjct: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60

BLAST of CsaV3_7G033050 vs. ExPASy TrEMBL
Match: A0A0A0K781 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.9e-08
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          +  K AL AWL L+ LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 5  LAKKWALMAWLLLTSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 58

BLAST of CsaV3_7G033050 vs. ExPASy TrEMBL
Match: A0A1S3CDU4 (thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.9e-08
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          +  K AL AWL L+ LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 5  LAKKWALMAWLLLTSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 58

BLAST of CsaV3_7G033050 vs. ExPASy TrEMBL
Match: A0A6J1GMH5 (thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-07
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 9  KCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          K  L AWL LS L+ ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 7  KLGLMAWLVLSSLTTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 57

BLAST of CsaV3_7G033050 vs. ExPASy TrEMBL
Match: A0A6J1JZ84 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-07
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 9  KCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          K  L AWL LS L+ ANS TSFQ+CY TC + CA+TPG+  S+C  RC + C
Sbjct: 7  KLGLMAWLVLSSLTTANS-TSFQECYATCFLICAITPGVAFSDCPLRCLQAC 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN45342.11.4e-26100.00hypothetical protein Csa_016718 [Cucumis sativus][more]
XP_038899383.12.9e-0860.00thionin-like protein 2 [Benincasa hispida][more]
XP_011659556.11.4e-0756.36thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_01... [more]
XP_008461039.11.4e-0756.36PREDICTED: thionin-like protein 2 [Cucumis melo][more]
XP_022953260.14.1e-0757.69thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KAC56.6e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441620 PE=4 SV=1[more]
A0A0A0K7816.9e-0856.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1[more]
A0A1S3CDU46.9e-0856.36thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1[more]
A0A6J1GMH52.0e-0757.69thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1[more]
A0A6J1JZ844.5e-0755.77thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G033050.1CsaV3_7G033050.1mRNA