CsaV3_7G032760 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGTGAAATGGAAGAAGGCAGGAACCAATAAGGTCAGCCGATTTCACGTGGTTCTAAACCATGTAATTACAACCCACCTCCCTCTTTGTATAAATACCGTCCTCTCACCCTGACTTTCTTCAGTTTATCCTTCTCTTTCAAAATCCCTACATTTCTGCTTCTCTCACATGGCCACCAATTTTGCCGTTTTTCATCCCGCTCCGATCACAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGGAAAGTACCAACCTAACCGCCCGAACGCCGCGGCGCCGAAATGGTGGTCGCCGATCTTCGGATGGTCTTCCGAACCGGACTACGTCGTATCTTCCGCCGCGGAAGTACAATCCATTCAGAATGCCGATCCGGAGCTCCACGGTGGAAGAATCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAGCTACTCCGAATGAAAACGCGGGAGAGCTCCACTTTCCATGATATTATGTACCATTCGGCGATCGCATCGCGTCTGGCGTCCGACTTGTCGGACCGAAGCAAGAAATAG ATGAATGTGAAATGGAAGAAGGCAGGAACCAATAAGTACCAACCTAACCGCCCGAACGCCGCGGCGCCGAAATGGTGGTCGCCGATCTTCGGATGGTCTTCCGAACCGGACTACGTCGTATCTTCCGCCGCGGAAGTACAATCCATTCAGAATGCCGATCCGGAGCTCCACGGTGGAAGAATCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAGCTACTCCGAATGAAAACGCGGGAGAGCTCCACTTTCCATGATATTATGTACCATTCGGCGATCGCATCGCGTCTGGCGTCCGACTTGTCGGACCGAAGCAAGAAATAG ATGAATGTGAAATGGAAGAAGGCAGGAACCAATAAGTACCAACCTAACCGCCCGAACGCCGCGGCGCCGAAATGGTGGTCGCCGATCTTCGGATGGTCTTCCGAACCGGACTACGTCGTATCTTCCGCCGCGGAAGTACAATCCATTCAGAATGCCGATCCGGAGCTCCACGGTGGAAGAATCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAGCTACTCCGAATGAAAACGCGGGAGAGCTCCACTTTCCATGATATTATGTACCATTCGGCGATCGCATCGCGTCTGGCGTCCGACTTGTCGGACCGAAGCAAGAAATAG MNVKWKKAGTNKYQPNRPNAAAPKWWSPIFGWSSEPDYVVSSAAEVQSIQNADPELHGGRIRSRFAPGCFTEEKAKLLRMKTRESSTFHDIMYHSAIASRLASDLSDRSKK* Homology
BLAST of CsaV3_7G032760 vs. NCBI nr
Match: KAE8646454.1 (hypothetical protein Csa_016484 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 2.7e-57 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. NCBI nr
Match: XP_008461069.1 (PREDICTED: uncharacterized protein LOC103499770 [Cucumis melo] >KAA0058783.1 uncharacterized protein E6C27_scaffold339G002570 [Cucumis melo var. makuwa] >TYK10577.1 uncharacterized protein E5676_scaffold459G002310 [Cucumis melo var. makuwa]) HSP 1 Score: 190.7 bits (483), Expect = 7.0e-45 Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. NCBI nr
Match: XP_038898524.1 (uncharacterized protein LOC120086132 [Benincasa hispida]) HSP 1 Score: 177.2 bits (448), Expect = 8.0e-41 Identity = 87/106 (82.08%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. NCBI nr
Match: XP_023004861.1 (uncharacterized protein LOC111498038 [Cucurbita maxima]) HSP 1 Score: 171.8 bits (434), Expect = 3.4e-39 Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. NCBI nr
Match: XP_022960101.1 (uncharacterized protein LOC111460952 [Cucurbita moschata] >KAG6593414.1 hypothetical protein SDJN03_12890, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025762.1 hypothetical protein SDJN02_12260, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 171.0 bits (432), Expect = 5.8e-39 Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. ExPASy TrEMBL
Match: A0A0A0K8X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433380 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.2e-51 Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. ExPASy TrEMBL
Match: A0A5D3CF29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002310 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.4e-45 Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. ExPASy TrEMBL
Match: A0A1S3CEC0 (uncharacterized protein LOC103499770 OS=Cucumis melo OX=3656 GN=LOC103499770 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.4e-45 Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. ExPASy TrEMBL
Match: A0A6J1KTB2 (uncharacterized protein LOC111498038 OS=Cucurbita maxima OX=3661 GN=LOC111498038 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39 Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. ExPASy TrEMBL
Match: A0A6J1H6P9 (uncharacterized protein LOC111460952 OS=Cucurbita moschata OX=3662 GN=LOC111460952 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.8e-39 Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-20 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 0
BLAST of CsaV3_7G032760 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 1.7e-17 Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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