CsaV3_7G031980 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G031980
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ethylene-responsive transcription factor ERF003-like
Location	chr7: 20295175 .. 20296300 (+)
RNA-Seq Expression	CsaV3_7G031980
Synteny	CsaV3_7G031980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCACCCTCCCTTTCATCCTATCACTCACTTTCTCCATTTTTCTCACTCTCTTATCACACCAACCAAAACTCATATACACATCTCCCCCCCTCTTCCATTGCAGCCTTCTTCTTCTTCTTCAACCAAAACTCATTTATATACACATCTCCCTCTTCCATTGCAGCCTTTTCTTCTTCTTCTTCCTCTTTGACAACAACCGATCCATGGCTCGTCCACAACAACGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGTAATTCTCTTCTTTTTCCTCTTCGTTAAATCTCATATTGTTTTATATGATCAGTAGAGCTTGAAATTTTCATAGAGAAAGTATTGTAAAAATGTATACTTTTTCTACTTTAAAACTATGAACTTTAGATCTGCTTGCTATCCAATTCAACATAATTCTACACGCATGTGTTCCCTACTCCCTTTCTTTTTTTGCTAGTGACCCAAGCGCTTAGGTTTGGTATCATCTCTTAAATTGTCAATTGACGAAACTAAATGTGAATAACTTATGTATTTTCAGGAAGACGAGAATATGGTTAGGAACGTTTGAGACGGCAGAGGATGCAGCTCGAGCTTATGACGAGGCAGCACGGTTGATGTGCGGTCCAAAAGCACGAACCAACTTTCCATACAATCCGAACGACCAACAGTCGTCGTCGTCATTCTCCTCCTCCTCCAAGCTTCTCTCTGCCGCATTGATAGAGAAATTACATAAATGTCACTTAGCTTCACTCCAAATTGCAAAACAACACGTCCACAAACAACATGCTGGATTCGAGCCGAGCTACCTCGCATACAGTGGATCACCTCCACCGATCATTACCGGAGCCACCACTAGTCAATGGGCATCAGATGAAACGTGGGTCTATTCCAACAAAGGTGATCAAATGGAGATGAATAACAATAACAATAATTATAATAACAACATTCATCATCAACAATGCCAACTTGAACCTCTTGAAGATGATCATATCGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAACTAAATTATTACATTATTTTTTTCTTCCATGTTGGGCAGTTCCAAATTTC

mRNA sequence

ATGGCTCGTCCACAACAACGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGAACGTTTGAGACGGCAGAGGATGCAGCTCGAGCTTATGACGAGGCAGCACGGTTGATGTGCGGTCCAAAAGCACGAACCAACTTTCCATACAATCCGAACGACCAACAGTCGTCGTCGTCATTCTCCTCCTCCTCCAAGCTTCTCTCTGCCGCATTGATAGAGAAATTACATAAATGTCACTTAGCTTCACTCCAAATTGCAAAACAACACGTCCACAAACAACATGCTGGATTCGAGCCGAGCTACCTCGCATACAGTGGATCACCTCCACCGATCATTACCGGAGCCACCACTAGTCAATGGGCATCAGATGAAACGTGGGTCTATTCCAACAAAGGTGATCAAATGGAGATGAATAACAATAACAATAATTATAATAACAACATTCATCATCAACAATGCCAACTTGAACCTCTTGAAGATGATCATATCGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

Coding sequence (CDS)

ATGGCTCGTCCACAACAACGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGAACGTTTGAGACGGCAGAGGATGCAGCTCGAGCTTATGACGAGGCAGCACGGTTGATGTGCGGTCCAAAAGCACGAACCAACTTTCCATACAATCCGAACGACCAACAGTCGTCGTCGTCATTCTCCTCCTCCTCCAAGCTTCTCTCTGCCGCATTGATAGAGAAATTACATAAATGTCACTTAGCTTCACTCCAAATTGCAAAACAACACGTCCACAAACAACATGCTGGATTCGAGCCGAGCTACCTCGCATACAGTGGATCACCTCCACCGATCATTACCGGAGCCACCACTAGTCAATGGGCATCAGATGAAACGTGGGTCTATTCCAACAAAGGTGATCAAATGGAGATGAATAACAATAACAATAATTATAATAACAACATTCATCATCAACAATGCCAACTTGAACCTCTTGAAGATGATCATATCGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAYSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT*

Homology

[Close]

BLAST of CsaV3_7G031980 vs. NCBI nr
Match: XP_011659507.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN45227.1 hypothetical protein Csa_015978 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 3.9e-107
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120
           TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120

Query: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180
           SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE
Sbjct: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180

Query: 181 QMIQELLDLGSFEIIT 197
           QMIQELLDLGSFEIIT
Sbjct: 181 QMIQELLDLGSFEIIT 196

[Close]

BLAST of CsaV3_7G031980 vs. NCBI nr
Match: XP_008461170.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 6.9e-96
Identity = 186/203 (91.63%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFPYNPNDQQSSSSF--SSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYL 120
           TNFPYN NDQQSSSSF  SSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQH GFEPSYL
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 121 AYSGSPPPIITGATTSQWASDETWVYSNKGDQMEM-----NNNNNNYNNNIHHQQCQLEP 180
           AY GSPPP ITGATTS+W SDETWVYS+KG Q+EM     NNNNNN NNNIHHQQCQLEP
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKG-QLEMNNNNNNNNNNNNNNNIHHQQCQLEP 180

Query: 181 LEDDHIEQMIQELLDLGSFEIIT 197
           LEDDHIEQMIQELLDLGSFEIIT
Sbjct: 181 LEDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of CsaV3_7G031980 vs. NCBI nr
Match: KAA0062846.1 (ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. makuwa] >TYK10527.1 ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 307.4 bits (786), Expect = 9.1e-80
Identity = 160/173 (92.49%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 27  LLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSF--SSSSKLLS 86
           L KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSF  SSSSKLLS
Sbjct: 7   LRKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSFSSSSSSKLLS 66

Query: 87  AALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAYSGSPPPIITGATTSQWASDETWVY 146
           AALIEKLHKCHLASLQIAKQHVHKQH GFEPSYLAY GSPPP ITGATTS+W SDETWVY
Sbjct: 67  AALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYLAYGGSPPPSITGATTSRWTSDETWVY 126

Query: 147 SNKGDQMEM-NNNNNNYNNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT 197
           S+KG Q+EM NNNNNN NNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT
Sbjct: 127 SDKG-QLEMNNNNNNNNNNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT 178

[Close]

BLAST of CsaV3_7G031980 vs. NCBI nr
Match: XP_038899890.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-76
Identity = 160/198 (80.81%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQH-AGFEPSYLA 120
           TNF YNPNDQ SS   SSSS LLSAALI KLHKCHLASLQIAK+H+HKQH AGF+P    
Sbjct: 61  TNFQYNPNDQHSS---SSSSNLLSAALIAKLHKCHLASLQIAKKHIHKQHPAGFQP---- 120

Query: 121 YSGSPPPIITGATTS-QWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDH 180
               PPP I G TT  +W  +ETWVYS++G QMEMN+NNN  NNNIHHQQC L+PLEDDH
Sbjct: 121 ----PPPSIAGPTTGRRWTPEETWVYSDEG-QMEMNDNNN--NNNIHHQQC-LQPLEDDH 180

Query: 181 IEQMIQELLDLGSFEIIT 197
           IEQMIQELL LGSFEIIT
Sbjct: 181 IEQMIQELLHLGSFEIIT 183

[Close]

BLAST of CsaV3_7G031980 vs. NCBI nr
Match: XP_023547696.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-75
Identity = 156/197 (79.19%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQH-VHKQHAGFEPSYLA 120
           TNF +NPNDQQSSSS SSSSKLLSAAL+ KLHKCHLASLQIAK+H  HKQH GFEP+Y  
Sbjct: 61  TNFQFNPNDQQSSSSSSSSSKLLSAALMAKLHKCHLASLQIAKKHAAHKQHPGFEPNYTV 120

Query: 121 YSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHI 180
           Y G PPP I+  TT +W  +ET        Q+E NN+    NNNIHHQQC L+PLEDD I
Sbjct: 121 Y-GVPPPSISQTTTDRWRQEET--------QIETNND----NNNIHHQQC-LQPLEDDDI 180

Query: 181 EQMIQELLDLGSFEIIT 197
           EQMIQELLDLGSFEIIT
Sbjct: 181 EQMIQELLDLGSFEIIT 183

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-46
Identity = 112/194 (57.73%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120
           TNFPYNPN     +  +SSSKLLSA L  KLHKC++ASLQ+ KQ   +       S  A 
Sbjct: 61  TNFPYNPN-----AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSAD 120

Query: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180
           S        G T     ++E+ +     +  E+   + N N      Q    PLE+DHIE
Sbjct: 121 S-------DGVT-----ANESHLNRGVTETTEIKWEDGNAN-----MQQNFRPLEEDHIE 172

Query: 181 QMIQELLDLGSFEI 195
           QMI+ELL  GS E+
Sbjct: 181 QMIEELLHYGSIEL 172

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.2e-39
Identity = 99/183 (54.10%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120
           TNFPYNPN  Q     SSSSKLLSA LI KLH+C++ASLQ+ +           PS L  
Sbjct: 61  TNFPYNPNASQ-----SSSSKLLSATLIAKLHRCYMASLQMTR-----------PSSLP- 120

Query: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQC--QLEPLEDDH 180
               P II     +        +   K  + E      N +      +C  Q +PLE+DH
Sbjct: 121 --EAPRIIASPNNAVKGIGADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDH 164

Query: 181 IEQ 182
           I Q
Sbjct: 181 IAQ 164

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPND------------QQSSSSFSSSSKLLSAALIEKLHKC 95
           N N+              S+ S S+SS  LS+ L  KL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NPNDQQSSSSFSSSSKLLSAALIEKL 92
            +++ S      +S L+S   + +L
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 NPNDQQSSSSFSS---SSKLLSAALIEKLHK 94
            ++  +S   +S   S K LS  L  KL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy TrEMBL
Match: A0A0A0KA12 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120
           TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120

Query: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180
           SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE
Sbjct: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180

Query: 181 QMIQELLDLGSFEIIT 197
           QMIQELLDLGSFEIIT
Sbjct: 181 QMIQELLDLGSFEIIT 196

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy TrEMBL
Match: A0A1S3CE50 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103499832 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.3e-96
Identity = 186/203 (91.63%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFPYNPNDQQSSSSF--SSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYL 120
           TNFPYN NDQQSSSSF  SSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQH GFEPSYL
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 121 AYSGSPPPIITGATTSQWASDETWVYSNKGDQMEM-----NNNNNNYNNNIHHQQCQLEP 180
           AY GSPPP ITGATTS+W SDETWVYS+KG Q+EM     NNNNNN NNNIHHQQCQLEP
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKG-QLEMNNNNNNNNNNNNNNNIHHQQCQLEP 180

Query: 181 LEDDHIEQMIQELLDLGSFEIIT 197
           LEDDHIEQMIQELLDLGSFEIIT
Sbjct: 181 LEDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy TrEMBL
Match: A0A5D3CEY4 (Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001780 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.4e-80
Identity = 160/173 (92.49%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 27  LLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSF--SSSSKLLS 86
           L KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSF  SSSSKLLS
Sbjct: 7   LRKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSFSSSSSSKLLS 66

Query: 87  AALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAYSGSPPPIITGATTSQWASDETWVY 146
           AALIEKLHKCHLASLQIAKQHVHKQH GFEPSYLAY GSPPP ITGATTS+W SDETWVY
Sbjct: 67  AALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYLAYGGSPPPSITGATTSRWTSDETWVY 126

Query: 147 SNKGDQMEM-NNNNNNYNNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT 197
           S+KG Q+EM NNNNNN NNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT
Sbjct: 127 SDKG-QLEMNNNNNNNNNNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT 178

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy TrEMBL
Match: A0A6J1JVB5 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111488171 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.6e-74
Identity = 152/197 (77.16%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQH-VHKQHAGFEPSYLA 120
           TNF +NPNDQQSSSS SSSSKLLSAAL+ KLHKCHLASLQIAK+H  HKQH GFE +Y  
Sbjct: 61  TNFQFNPNDQQSSSSSSSSSKLLSAALMAKLHKCHLASLQIAKKHAAHKQHPGFESNYAV 120

Query: 121 YSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHI 180
           Y G PPP I+  TT++W  +ET + +N              NNNIHHQQC L+PLEDD I
Sbjct: 121 Y-GVPPPSISQTTTNRWRQEETQIETN--------------NNNIHHQQC-LQPLEDDDI 180

Query: 181 EQMIQELLDLGSFEIIT 197
           EQMIQELLDLGSFEIIT
Sbjct: 181 EQMIQELLDLGSFEIIT 181

[Close]

BLAST of CsaV3_7G031980 vs. ExPASy TrEMBL
Match: A0A6J1GPQ0 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111456403 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.7e-74
Identity = 154/197 (78.17%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQH-VHKQHAGFEPSYLA 120
           TNF +NPNDQQSSSS SSSSKLLSA L+ KLHKCHLASLQIAK+H  HKQH GFEP+Y  
Sbjct: 61  TNFQFNPNDQQSSSSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHAAHKQHPGFEPNYAV 120

Query: 121 YSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHI 180
           Y G P P I+  TT +W  +ET        Q+E NN+    NNNIHHQQC L+PLEDD I
Sbjct: 121 Y-GGPSPSISQTTTHRWRQEET--------QIETNND----NNNIHHQQC-LQPLEDDDI 180

Query: 181 EQMIQELLDLGSFEIIT 197
           EQMIQELLDLGSFEIIT
Sbjct: 181 EQMIQELLDLGSFEIIT 183

[Close]

BLAST of CsaV3_7G031980 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-47
Identity = 112/194 (57.73%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120
           TNFPYNPN     +  +SSSKLLSA L  KLHKC++ASLQ+ KQ   +       S  A 
Sbjct: 61  TNFPYNPN-----AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSAD 120

Query: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180
           S        G T     ++E+ +     +  E+   + N N      Q    PLE+DHIE
Sbjct: 121 S-------DGVT-----ANESHLNRGVTETTEIKWEDGNAN-----MQQNFRPLEEDHIE 172

Query: 181 QMIQELLDLGSFEI 195
           QMI+ELL  GS E+
Sbjct: 181 QMIEELLHYGSIEL 172

[Close]

BLAST of CsaV3_7G031980 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPND------------QQSSSSFSSSSKLLSAALIEKLHKC 95
           N N+              S+ S S+SS  LS+ L  KL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of CsaV3_7G031980 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NPNDQQSSSSFSSSSKLLSAALIEKL 92
            +++ S      +S L+S   + +L
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]

BLAST of CsaV3_7G031980 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 NPNDQQSSSSFSS---SSKLLSAALIEKLHK 94
            ++  +S   +S   S K LS  L  KL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]

BLAST of CsaV3_7G031980 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.6e-20
Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 65
          +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 NPNDQQSSSSFSS---SSKLLSAALIEKLHK 94
            ++  +S   +S   S K LS  L  KL K
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSELLNAKLRK 92

The following BLAST results are available for this feature:

BLAST of CsaV3_7G031980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659507.1	3.9e-107	100.00	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN45227.1 hy...	[more]
XP_008461170.1	6.9e-96	91.63	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
KAA0062846.1	9.1e-80	92.49	ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. ...	[more]
XP_038899890.1	2.1e-76	80.81	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
XP_023547696.1	3.9e-75	79.19	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of CsaV3_7G031980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	2.3e-46	57.73	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	6.2e-39	54.10	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	1.7e-25	61.39	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	2.6e-21	59.30	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	2.6e-21	60.44	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CsaV3_7G031980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA12	1.9e-107	100.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=...	[more]
A0A1S3CE50	3.3e-96	91.63	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3CEY4	4.4e-80	92.49	Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var...	[more]
A0A6J1JVB5	3.6e-74	77.16	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GPQ0	4.7e-74	78.17	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]

BLAST of CsaV3_7G031980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	1.7e-47	57.73	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	1.2e-26	61.39	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	1.9e-22	59.30	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	1.9e-22	60.44	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	8.6e-20	58.24	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 4.9E-42 score: 155.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 8.3E-12 score: 45.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 21.126986
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..66 e-value: 3.48312E-35 score: 116.602
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..65 e-value: 1.3E-26 score: 94.5
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..195
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..195
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G031980.1	CsaV3_7G031980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity