CsaV3_7G031710 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G031710
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein HEADING DATE REPRESSOR 1-like isoform X2
Location	chr7: 20081426 .. 20086300 (+)
RNA-Seq Expression	CsaV3_7G031710
Synteny	CsaV3_7G031710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACGCAAAATCTGAACCGTTGGATTACAATCACGTGGTTTAGCTGTCGTTTTGTTCAGCAATTTATCTGCTTCTCTTCTCGATGAATGCACCCACAACAAACACCGAACCAAAAATCCTTTAAACCGACTCGAAATCCACAACTCCATTTCCCTCTCTCTCTCTCTCATTTTCTATATGCGAAAATTCGAATAGGATTCTTCGGAACGACTGTCTGGTGAAGCTCTTCCTCGAATTCCTTCCTCTTCAATGGAACACAATCATTCCGGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCAGTGGAATTCTCGCCGGAGGTCAGGTAGTCAAAGTACTAGTCAATCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGATTAATTTCTCCAGTGGAAATTGCTTCCAATTTTTTGAAACTTTGTGAAGTCGATGAAGATCAGAAACTCGAAATTTCTCTTTTCGGAAGTGAGCGAATTCGTTTAGGTTTTGAAATTATCGCATAATCTGAGACATTTCCTCACAAATTTTAGAAGAATTTCTCGCCGGAGGTCAGGTAGTCGTAGTACTAGTTAATCACTCTCTCTCTCTAGCTAATTAACTTCTCTGGTGAAACTTGCTTTCTTCAATTTTTGAAAACTTTGCGAAGTCGATGAAGATCAGAACTCGGAATTTCTCTTTTCGGAAGTTAGCGAATCTGTTTAGGTTTTGAAATTATCGCATAATCTGAGACATTTCTTCACAAATTATAGAAGAATTTCATGCCCTAACTCAAGAAATTAACCAAGCTTGTCTGTTATGATTTCTCATCCTTCCTGCTTTTGGAAATACGAAAAATGATTGAACTTCGCTCTTATGTTATGTGTTGGTTTCTTCAAGATTATGTTCATCGCTTACTCCTCCTGTGAATTTCTGCTAATCTGTTACGTTTCTCCAATAAAAATAAAAATAAAAATAAACTTTATTTGTATATATTTTTTAAAATTGCGTAGATTTTAGGCCCCGAAGAATCGATGATAATGATTAATTAATTTAATTATATTTTGGTGTATGCATTAATGTGTTTGCCTTTTAGGCTCATTTATAAATTTATGGCTCAAAATTGGGTTAACAAAGCCAAAGCGCAAGGCCACCCGCTACCCATTACCCATCACCCATCACCCAACCCACCGGTTGAAGTTGACTTATCAATAGACTTTCTTTTTCTTTTGCCCACTCGTTTCGGTATATTACACGAAAGCTCTTTATTGTCATATTACGTGGATTGTATTTTTATTTAGAAGGGAAATAATAAGCTCTTTATTAAAACGACGTCGGAGCTCGTTTTTCTTATTTATTTAATTTGTTTCTTAGGGAAAATATGTTTTTTTTGTCAATATTATTGATTTTGTTTTATTCATAATTCAGCATGCCTTACACGTTACGAGCTTTATTATTATTATTATTATTATTATTATTATTATGTATAATAACGTTACGTGCTTTACTATGTTTTCACTTTTTTTTTTGAAGAATTTTCGTGTTAATTAGAGATTGTTCTTTGTATTGAAAATCATCTTTTAGTTTCCAAAATAATAATAATAATAATTATTATTATTATGATAATTAAAAAATCATCTTTTAGTGTTTATAACTTCAAATGTATTTAAAATAAAGACAAATTGCAAAAAAAAAAAACACAACTGGAAGTATGATTGTAATTATAAATAGATCCACAAAATTTTAATTGTAGAAAGTGCCCTCAATTAATTCATAGAATTGATACGGTGTCTAATTGGGTAAGTTCTTAGGTTCGAGAGATCAAATTGAAATTTTTAACTGTAATTGTCATGATACTTTAGGGATGGTTTTGAATTTCGGGAAAATTACCCTTTGTTTTCAGGTATGAACCATGTCTCTAACTATTTGATGTCACTCATGTTTTTTCTTTTGAATATCATTTATATTTGGAAGATTTGAGTCTTAACTTTTTTGTCAAATGTATATATTTTATATGAAGTCAAAAGTATATACTTTGTGATTAGTTGAGTTGTGTCGATGTCGTGTATTTAGATTTTAATATCATTTTGATCCATATACTTTGAGTTGGTTCTCTTTTACAAATTTTGTCTATTAGCATTGTATCTTTTTAAGTCTTGGATACAAGTTTAACCTCATTTGTTTTTTATTCCTGATTAATTTCTGAATAAAAGATAGAAGACATTTTGAAATTGGGTTTGTGAGCCAATGGTTATTTTCAAATATTATATTTTCCAACCAAGTGGATTAAGAAACTTTTGTAGTAATGAGAAACTGATACCAAACCAACATGTCACTTCACAAAATTATACATCAAAACAATTTTCCTTTTGTATCTTTTCAACTAATAGAGATTTTCCCCCTTTTAAGACACAATATCTAGTTGTCTAATTTAATCTGGTTGCCTTTTTTTCCCTCTTTCTTCACTTTTAAAATTTTAATTTTCACTCTACAAATTAAAAGTGATAATTCAACCTTTATCAGGAATTAATTAAAGGGTTGGCCATTGAGATGCTCCATAATCTATTCCATAAATAGTGAATCTATAAAGGTTAAAAGATTTTAAGTTACAATCTCTTTGGACATAGGATCCCTATTCCTTACTTAGATGCTTTTCTCATATGTCAAGTTTGGTATTCAAATGATGGGACTTAACGCCCACTATATCATATATTGGTTTCAGTATTCTTATAAGGCCCACGTTCAGTTATTAATCATTGAAATTTTCTTGTTGTCTTCTTCTTGAAAATCAAGATTTGGTGTTTTGGGGATCAATTATATAACGTTTCCACCCCATCTTTGATTTTCATTTCATTTCATTTCTCATCATAATGTAAATTTGATGATTTTTTATATTTGAAGAATTGCATGCCTGTGACTTTATCTTGGAGTTGGCTTACTGTTCTCCTTTTTACCTCTTGTTGTTGCTTGGAGACACACTCTCTCTCTCTCATAGTCACTCACTCTAAAGCTAATATCATTATTGAATCTTTGCTTTCAATATAATTTTCCCTTTTCTGATTGATGGATAGTTTGTTCTCATATTTTTCACAATTGGGTTATATTGAATTCTGTTAGGGGCTGTTTGGGGCTGGTACTATTCGGAATCAGGAACTCTGAGGTTGTTTTAGCATTAGCTTTTTTTCTATTCAACTTACCCATAAGTAAACATGACCCCAACGCGTACATGTACTTTTATAACCTATTTGATGTTTCTACGAATTTTAACTAGACAATAAATTGAATGCTTGGAACTCTATTAGAGATAAATTTCAAATTTATATTTAGAAGAACCATTAGCGTTATAAAAAATTGAACATGTCAAACTTTATTAGACAAAAGTTTAATTAAATCTAAAGACTCGTTAGGTTGTTTTTAGGTTAAAAAACTTGTTAGATTCAAAATTTAAGGTCTAAATATTAATTATTAGAGACCAAATAGAATATATTTGGAAGTTTAGGGGATAAATTTTGTTATACAACTTTGATATAGTATAAAATCTATAGCAGAATCTGTGTGCCTAGCAATGCTAGCTGATATAACTTAGGGACCTCAATAATTTTTATTTATTGAACTTTTCTTTATTTGTTGGTCCTCTAAATTGTTTGGAACTAGAATGGTATCTTGTTTCCAACAGCTAGCGGGAGGAATTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATAAAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGATAACATATCTCAGGACACTGACATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGTTGTGTAATAACTAATTAATTTCATTGTTTACGTAAAAATGTGGCCTCGTTAATTTTTTCAACTGAAAGGCAGTTGGGTTGTGTCGTATAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAAAATAATATATCCCATCACATATTTATACTTAATTTGTTTGTTTTATATTCTTTTTGTAGATTATTTCATGTGGGGGTAGATAAAAAAAAAGTTTCAATTAAATTATATATCCATGAATATACATGCATCCTAGTATTATATTGTCATTATATTGGGATGAAAAAAGTTAATTAGTGGGAG

mRNA sequence

ATGGAACACAATCATTCCGGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCAGTGGAATTCTCGCCGGAGGTCAGGTAGTCAAACTAGCGGGAGGAATTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATAAAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGATAACATATCTCAGGACACTGACATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAA

Coding sequence (CDS)

ATGGAACACAATCATTCCGGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCAGTGGAATTCTCGCCGGAGGTCAGGTAGTCAAACTAGCGGGAGGAATTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATAAAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGATAACATATCTCAGGACACTGACATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAA

Protein sequence

MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVSPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDNEGADDGSDEP*

Homology

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BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_011659486.1 (protein HEADING DATE REPRESSOR 1 isoform X1 [Cucumis sativus] >KGN45198.1 hypothetical protein Csa_016317 [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 3.0e-113
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV
Sbjct: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGADDGSDEP
Sbjct: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 213

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BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_004135890.1 (protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 1.6e-109
Identity = 209/213 (98.12%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS    SGRNLDKETEDQDSANKTCDKQEV
Sbjct: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS---ASGRNLDKETEDQDSANKTCDKQEV 60

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGADDGSDEP
Sbjct: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 210

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BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_008461210.1 (PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo] >KAA0058690.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucumis melo var. makuwa] >TYK10496.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 202/213 (94.84%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS    SGRNL KETEDQDSANKTCDKQE 
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS---ASGRNLYKETEDQDSANKTCDKQEE 84

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SP NDNISQDTD V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 85  SPANDNISQDTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 144

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 145 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKR 204

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGA DGSDEP
Sbjct: 205 SEVERENAMLHDQINMLMSMLDNEGA-DGSDEP 233

[Close]

BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_038897908.1 (protein HEADING DATE REPRESSOR 1 [Benincasa hispida])

HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97
Identity = 192/213 (90.14%), Postives = 198/213 (92.96%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           ME NHSGKIDRILEGFSPASAPRIQW SRRRS    SGRNLDK TED DSA KTCDKQE 
Sbjct: 47  MELNHSGKIDRILEGFSPASAPRIQWKSRRRS---ASGRNLDKVTEDHDSAIKTCDKQEE 106

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           S GND ++QDT+ VLPELSERRKALFEPLEPV+NINGRRPSAESLLPPPDFD+T YPRGW
Sbjct: 107 SHGNDKLAQDTNTVLPELSERRKALFEPLEPVKNINGRRPSAESLLPPPDFDDTIYPRGW 166

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQ+QLLQEKSKR
Sbjct: 167 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQLQLLQEKSKR 226

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGA DGSDEP
Sbjct: 227 SEVERENAMLHDQINMLMSMLDNEGA-DGSDEP 255

[Close]

BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_022148239.1 (protein HEADING DATE REPRESSOR 1 [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 2.4e-86
Identity = 178/215 (82.79%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           ME ++SGKIDRILEGFSPASAPRI W SRRRS    SGRNLDK TED DSANK  DKQE 
Sbjct: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRS---ASGRNLDKVTEDHDSANKIWDKQE- 60

Query: 61  SPGNDNISQD--TDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPR 120
            P + + +QD   ++V PELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPR
Sbjct: 61  EPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPR 120

Query: 121 GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKS 180
           GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKS
Sbjct: 121 GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKS 180

Query: 181 KRSEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           KRSEVERENAMLHDQINMLM+ML+NEGA DGSDEP
Sbjct: 181 KRSEVERENAMLHDQINMLMNMLENEGA-DGSDEP 210

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BLAST of CsaV3_7G031710 vs. ExPASy Swiss-Prot
Match: B8AE37 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 121/206 (58.74%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 18  PASA--PRIQWNSRRRSGSQTSGRNLDKETEDQ---DSANKTCDKQEVSPGNDNISQDTD 77
           PASA  PRI W SRRRS S  +GR+L +E   +   +  N    ++ +   + N     D
Sbjct: 4   PASADPPRIFWKSRRRSAS-ANGRSLQQELNKEAADEQLNNQAHEEAMKIDDANAVSTDD 63

Query: 78  MVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKL 137
            V P+    LSE+RKALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GKKRKL
Sbjct: 64  DVHPDPKANLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKL 123

Query: 138 VNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 197
           VNVDVVESMRRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+
Sbjct: 124 VNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENS 183

Query: 198 MLHDQINMLMSMLD-NEGADDGSDEP 214
           MLH+Q++MLM+MLD NE  D+  + P
Sbjct: 184 MLHEQVSMLMNMLDENEAFDEEGEAP 205

[Close]

BLAST of CsaV3_7G031710 vs. ExPASy Swiss-Prot
Match: Q6K678 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 121/206 (58.74%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 18  PASA--PRIQWNSRRRSGSQTSGRNLDKETEDQ---DSANKTCDKQEVSPGNDNISQDTD 77
           PASA  PRI W SRRRS S  +GR+L +E   +   +  N    ++ +   + N     D
Sbjct: 4   PASADPPRIFWKSRRRSAS-ANGRSLQQELNKEAADEQLNNQAHEEAMKIDDANAVSTDD 63

Query: 78  MVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKL 137
            V P+    LSE+RKALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GKKRKL
Sbjct: 64  DVHPDPKANLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKL 123

Query: 138 VNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 197
           VNVDVVESMRRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+
Sbjct: 124 VNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENS 183

Query: 198 MLHDQINMLMSMLD-NEGADDGSDEP 214
           MLH+Q++MLM+MLD NE  D+  + P
Sbjct: 184 MLHEQVSMLMNMLDENEAFDEEGEAP 205

[Close]

BLAST of CsaV3_7G031710 vs. ExPASy TrEMBL
Match: A0A0A0K6R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430820 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV
Sbjct: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGADDGSDEP
Sbjct: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 213

[Close]

BLAST of CsaV3_7G031710 vs. ExPASy TrEMBL
Match: A0A5A7UUH2 (Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001460 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 202/213 (94.84%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS    SGRNL KETEDQDSANKTCDKQE 
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS---ASGRNLYKETEDQDSANKTCDKQEE 84

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SP NDNISQDTD V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 85  SPANDNISQDTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 144

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 145 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKR 204

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGA DGSDEP
Sbjct: 205 SEVERENAMLHDQINMLMSMLDNEGA-DGSDEP 233

[Close]

BLAST of CsaV3_7G031710 vs. ExPASy TrEMBL
Match: A0A1S3CE60 (uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 202/213 (94.84%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS    SGRNL KETEDQDSANKTCDKQE 
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS---ASGRNLYKETEDQDSANKTCDKQEE 84

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SP NDNISQDTD V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 85  SPANDNISQDTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 144

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 145 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKR 204

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGA DGSDEP
Sbjct: 205 SEVERENAMLHDQINMLMSMLDNEGA-DGSDEP 233

[Close]

BLAST of CsaV3_7G031710 vs. ExPASy TrEMBL
Match: A0A6J1D3E7 (protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86
Identity = 178/215 (82.79%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           ME ++SGKIDRILEGFSPASAPRI W SRRRS    SGRNLDK TED DSANK  DKQE 
Sbjct: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRS---ASGRNLDKVTEDHDSANKIWDKQE- 60

Query: 61  SPGNDNISQD--TDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPR 120
            P + + +QD   ++V PELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPR
Sbjct: 61  EPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPR 120

Query: 121 GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKS 180
           GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKS
Sbjct: 121 GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKS 180

Query: 181 KRSEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           KRSEVERENAMLHDQINMLM+ML+NEGA DGSDEP
Sbjct: 181 KRSEVERENAMLHDQINMLMNMLENEGA-DGSDEP 210

[Close]

BLAST of CsaV3_7G031710 vs. ExPASy TrEMBL
Match: A0A6J1KTY5 (protein HEADING DATE REPRESSOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111497606 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.3e-80
Identity = 165/213 (77.46%), Postives = 181/213 (84.98%), Query Frame = 0


Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           M  ++SGK+DRILEGFSPASAPRIQW SRRRS    +GR LD  T+D D+A+KT DK E 
Sbjct: 84  MASDNSGKLDRILEGFSPASAPRIQWKSRRRS---ATGRILDNITQDHDAADKTSDKHEE 143

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
                   Q    + P+LS+RRKALFEPLE ++NINGRRPSAESLLPPPDFD T YPRGW
Sbjct: 144 -------PQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW 203

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIA+QEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 204 LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 263

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQ++MLMSML+NEGA DG DEP
Sbjct: 264 SEVERENAMLHDQVSMLMSMLENEGA-DGPDEP 285

[Close]

BLAST of CsaV3_7G031710 vs. TAIR 10
Match: AT1G80940.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 221.9 bits (564), Expect = 5.1e-58
Identity = 121/205 (59.02%), Postives = 154/205 (75.12%), Query Frame = 0


Query: 10  DRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVSPGNDNISQ 69
           D  + GF P S  +I W SR+RS       NLDK  E       T +K E++  +     
Sbjct: 16  DGFVGGFFPVSTTKIAWKSRKRSAL----LNLDKAPEAVTEV--TPEKNEITAMDTEKVG 75

Query: 70  DTDMVLPELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDFDETTYPRGWLIGKKRKL 129
           +     P LSE+RKALFEPLEP+ N+NG+RP +A+SLLPPPDF+   YP+GWLIGKKRKL
Sbjct: 76  EPMTTTPLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLIGKKRKL 135

Query: 130 VNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 189
           VNVDVVESMRRIAVQEMNRKDREI+GLNEQL+ED+RCLEHLQ+QLLQE+SKR+E+EREN 
Sbjct: 136 VNVDVVESMRRIAVQEMNRKDREIDGLNEQLEEDSRCLEHLQLQLLQERSKRTEIERENT 195

Query: 190 MLHDQINMLMSMLDNEGADDGSDEP 214
           ML +Q++ML++M+  E  ++G++EP
Sbjct: 196 MLKEQVDMLVNMI-QEDDEEGAEEP 213

[Close]

BLAST of CsaV3_7G031710 vs. TAIR 10
Match: AT1G80940.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 138.3 bits (347), Expect = 7.4e-33
Identity = 79/143 (55.24%), Postives = 97/143 (67.83%), Query Frame = 0


Query: 10  DRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVSPGNDNISQ 69
           D  + GF P S  +I W SR+RS       NLDK  E       T +K E++  +     
Sbjct: 16  DGFVGGFFPVSTTKIAWKSRKRSAL----LNLDKAPEAVTEV--TPEKNEITAMDTEKVG 75

Query: 70  DTDMVLPELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDFDETTYPRGWLIGKKRKL 129
           +     P LSE+RKALFEPLEP+ N+NG+RP +A+SLLPPPDF+   YP+GWLIGKKRKL
Sbjct: 76  EPMTTTPLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLIGKKRKL 135

Query: 130 VNVDVVESMRRIAVQEMNRKDRE 152
           VNVDVVESMRRIAVQEMNRK ++
Sbjct: 136 VNVDVVESMRRIAVQEMNRKVKQ 152

The following BLAST results are available for this feature:

BLAST of CsaV3_7G031710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659486.1	3.0e-113	100.00	protein HEADING DATE REPRESSOR 1 isoform X1 [Cucumis sativus] >KGN45198.1 hypoth...	[more]
XP_004135890.1	1.6e-109	98.12	protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus]	[more]
XP_008461210.1	4.8e-103	94.84	PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo] >KAA0058690.1 pro...	[more]
XP_038897908.1	3.0e-97	90.14	protein HEADING DATE REPRESSOR 1 [Benincasa hispida]	[more]
XP_022148239.1	2.4e-86	82.79	protein HEADING DATE REPRESSOR 1 [Momordica charantia]	[more]

BLAST of CsaV3_7G031710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AE37	1.8e-52	58.74	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 ...	[more]
Q6K678	1.8e-52	58.74	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR...	[more]

BLAST of CsaV3_7G031710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6R3	1.5e-113	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430820 PE=4 SV=1	[more]
A0A5A7UUH2	2.3e-103	94.84	Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CE60	2.3e-103	94.84	uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=...	[more]
A0A6J1D3E7	1.2e-86	82.79	protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 ...	[more]
A0A6J1KTY5	1.3e-80	77.46	protein HEADING DATE REPRESSOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111497606 PE=...	[more]

BLAST of CsaV3_7G031710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80940.1	5.1e-58	59.02	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G80940.2	7.4e-33	55.24	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 166..186
None	No IPR available	COILS	Coil	Coil	coord: 138..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	PANTHER	PTHR37205:SF1	F23A5.30 PROTEIN	coord: 3..209
IPR038864	Protein heading date repressor 1	PANTHER	PTHR37205	F23A5.30 PROTEIN	coord: 3..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G031710.1	CsaV3_7G031710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development