CsaV3_7G031150 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G031150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	thylakoid lumenal 19 kDa protein, chloroplastic
Location	chr7: 19730446 .. 19733421 (-)
RNA-Seq Expression	CsaV3_7G031150
Synteny	CsaV3_7G031150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTTTGTCCGTTTAGGTAAGAATAGTGACCGTTACATTTCTTTTTTGTTAGAAGAGTTAATACGTAAATATACATGGCGGAGTTTTCAACCTCCACTTCTCTACTCTATTTTTCTTTTTAAAAAACAATCTCTCTAAATTAGGATCACCTTTCTACTCTCCAACTCCAGATAATACGTAAATTAGATAATATGTGAGATGTATGTGATGTCCAAGCTACATTTAATTATTTTTCTTTTATTTTTTATTGGAGACATTAACTCCTTGACACGTAATGGGGATTACCTTTGTTAGTGTGAGAGTTGAGTTATGCTCGAAACGTAGATAATTACTCATGAGTAGGTTATGATCGTGGGATAATACCCAAAGTGTAGAGTAGTTGCGGGATCATGGATAATGGGCTCGCAGATGGAAGAAAAGTAGGTGGTTAGCTTCCGCCACTATACTACTTCCTCACAATTCTCTTTTAACAATCTCTCATCCACACCTACTACTCAATCCACATATGCTCGTATATTAATTAGTTGTTTCATCAAGCTTTTGACTTTTGCTTGTATTTATCTAAATTTAACAAATAGTTAATTAATGTTATATTAAATGGATTTTAAATTCAATTTGGTGAATGTAAAAACAAAATTTAATAACCATGAAGAAAAAGAAAAACTTAATTCGTCGTGATGTGATATCATCAACGTGAGCAAGCCATAGAAGAGAGTAAAGACATAAATTAGGGGTTAGTTATAAAGTTAAATGGGATTCTACAAAAATAGAAAAAAAAGTACATAAATTCAAAAAATAAAAAAAACGATTTAGAAAAATAAAGGAAAATAGAAAAAGAATGGATAAGGAGAAAATCCTGTTCGAGGAGATACACCAGAAGCCCAAATCCACGAAAATCAATCACTATGGCCACAGCAATCGCGCCATTGGCGTTCTTAACCTCCACCGGCACAACCGCCCCAAAACCACCGCAAGCTTCATCGTTACCAAAGCCCCAAATTCCCATTCTCCAATCCAAACCTCCACTTTCATCAACTGCCCCAATCTCCATCGCAGCCACTGCCATCGCCGTAGCCGCGATCCTTAGCACCGCTACACCCTCCCTCGCCGATACCGGGGCCGCTTTCAATGTCTACTATGGCACTGCCGCCAGCGCCGCCAACTACGGTGGCCTTGGTGGCAACGCCAACAAGAAAGACACAGCAGAATACATCTACGACGTGCCGGAAGGATGGAAAGAGCGATTAGTATCCAAAGTCGAAAAAGGTACTCCAAAATCCCTAAATTAAAGATATCTAATAGCTCAATTCGTTCCGAAAATTAATTCTACCTACTAATTTCCGCAGGTACCAACGGAACCGATAGTGAATTTTACAATCCGAAGAAACGATCAGAGAAAGAATACCTAACTTTCCTGGCTGGAATCCGGCAATTAGGGCCGAAGGATGTGATTCTGAATAACCTGGCTCTATCGGACGTGAATTTGCAGGATCAAATCGCGAGCGCCGAGAGCTTCTTGGCGGAAGAGAAGAAGGATGAGAATGGACAGGTTTATTATGTGTACGAGATCGACGGCGCCGGAACTCATAGTTTGATCTCGGTGACTTGTGCAAAGAACAAGCTGTATGCTCATTTTGTGAATGCGCCGACGCCGGAGTGGAATCGGGACCAGGATATGCTCCGGCATGTTCATGATTCGTTCAAGACGGTGGGATCGTATTAGGCAGCTTTTGTGGCGTCACCGGAGATTTGATCGGAGAGTGTATGAATTTGTTGTTATGCACACACATATATATATATGCTTATTCTTGAATGATGAGAATCGGATGCTTTTTTTCACCATTCACACTCATCTCTCTCGTCTCTGTTTTATGAGAATTTTGTTCATACAATCTAATGTTTTTGGAAGATGACTTGTGTAAATTTAGCAAGTTTTAATTAAATATATGCTAATGTTTAATTTGTTAGTTGCGAATTTGAACGTTACTCAAATTTGATTAAAACTTCACAACATTAGCTTAGATGTTCACATCTTTACTTCATGCAAGGTTGATCAACCTTACATGCCTAATTTAGGTTTGATGCCTGTATTGAGATTATTTTTGTAATGTAACATGATTGAGATTCAATGTTTGGAGCGTGTATTTGAAATCTGTTTGTAATATAATTTTCATAACATCCCAGCAATTTACACTTTACAATACACTTCTTATAACATTCAAGCAATTTACGAATGCCATCAATCTTACGGTTTATACAAATGCCATTAATTATTGGCAGAGACGACACTCTATTCTATTAATACAAAGTGAACCCATCGTCGTAAGAAACGTGCCATCCCCGACGGCAAGGAGGTGCACGTTCATCGTACTCGGAGCAACAACTCCACCGTCTCTTCCAGTTGCCAGTTCCGGAGTTAGGACGATTTGATTTATCATTCCATTTATAAACGATCACACCGGAGCCGTCACTCCATTCACCGTCAATCCCCTGGTGCGGGGGCGACAAAGCAAACAACCCCCTCTCCCCTATTAATAAAACCAGATTCACGTACTATTTCAACCTCAATATAAGCTTTTCTCAAAAGAATATAAAAACTGTGAAGACGAATCCCCACTCTTCGGAAAAACATCTAAGACCTAATTTTAAAATTTCGAGTGTACGTTACGAACCAGTGATGTGGCCATGGAAGACGCAAGCGGAAGGAGAATTATCGACATCCGAGTAAACGGTATGGCACCGTAAGCAGCGTTTCGCGACGGAGGATGATTGGAAACTGGTGGAATTTATCGGAGGGTTGATTGAGTTTGAGCAGGCCACGATCTTTGATCCGTTCCATGGTGGAAACCTGGGGCTGTGATTTAAGCTTGGCGCTAACGCCATGGAAGCACTCATTCAATTTCGTTTCACAGAGAACAATGAGATTCCAAGGTTAGGGATGAGTTAGAGATCGAGTAGAGCCGATAACGAGAGG

mRNA sequence

ATGGCCACAGCAATCGCGCCATTGGCGTTCTTAACCTCCACCGGCACAACCGCCCCAAAACCACCGCAAGCTTCATCGTTACCAAAGCCCCAAATTCCCATTCTCCAATCCAAACCTCCACTTTCATCAACTGCCCCAATCTCCATCGCAGCCACTGCCATCGCCGTAGCCGCGATCCTTAGCACCGCTACACCCTCCCTCGCCGATACCGGGGCCGCTTTCAATGTCTACTATGGCACTGCCGCCAGCGCCGCCAACTACGGTGGCCTTGGTGGCAACGCCAACAAGAAAGACACAGCAGAATACATCTACGACGTGCCGGAAGGATGGAAAGAGCGATTAGTATCCAAAGTCGAAAAAGGTACCAACGGAACCGATAGTGAATTTTACAATCCGAAGAAACGATCAGAGAAAGAATACCTAACTTTCCTGGCTGGAATCCGGCAATTAGGGCCGAAGGATGTGATTCTGAATAACCTGGCTCTATCGGACGTGAATTTGCAGGATCAAATCGCGAGCGCCGAGAGCTTCTTGGCGGAAGAGAAGAAGGATGAGAATGGACAGGTTTATTATGTGTACGAGATCGACGGCGCCGGAACTCATAGTTTGATCTCGGTGACTTGTGCAAAGAACAAGCTGTATGCTCATTTTGTGAATGCGCCGACGCCGGAGTGGAATCGGGACCAGGATATGCTCCGGCATGTTCATGATTCGTTCAAGACGGTGGGATCGTATTAG

Coding sequence (CDS)

ATGGCCACAGCAATCGCGCCATTGGCGTTCTTAACCTCCACCGGCACAACCGCCCCAAAACCACCGCAAGCTTCATCGTTACCAAAGCCCCAAATTCCCATTCTCCAATCCAAACCTCCACTTTCATCAACTGCCCCAATCTCCATCGCAGCCACTGCCATCGCCGTAGCCGCGATCCTTAGCACCGCTACACCCTCCCTCGCCGATACCGGGGCCGCTTTCAATGTCTACTATGGCACTGCCGCCAGCGCCGCCAACTACGGTGGCCTTGGTGGCAACGCCAACAAGAAAGACACAGCAGAATACATCTACGACGTGCCGGAAGGATGGAAAGAGCGATTAGTATCCAAAGTCGAAAAAGGTACCAACGGAACCGATAGTGAATTTTACAATCCGAAGAAACGATCAGAGAAAGAATACCTAACTTTCCTGGCTGGAATCCGGCAATTAGGGCCGAAGGATGTGATTCTGAATAACCTGGCTCTATCGGACGTGAATTTGCAGGATCAAATCGCGAGCGCCGAGAGCTTCTTGGCGGAAGAGAAGAAGGATGAGAATGGACAGGTTTATTATGTGTACGAGATCGACGGCGCCGGAACTCATAGTTTGATCTCGGTGACTTGTGCAAAGAACAAGCTGTATGCTCATTTTGTGAATGCGCCGACGCCGGAGTGGAATCGGGACCAGGATATGCTCCGGCATGTTCATGATTCGTTCAAGACGGTGGGATCGTATTAG

Protein sequence

MATAIAPLAFLTSTGTTAPKPPQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTVGSY*

Homology

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BLAST of CsaV3_7G031150 vs. NCBI nr
Match: XP_004135924.1 (thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis sativus] >KGN45140.1 hypothetical protein Csa_016904 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 9.1e-130
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTGTTAPKPPQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAIL 60
           MATAIAPLAFLTSTGTTAPKPPQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAIL
Sbjct: 1   MATAIAPLAFLTSTGTTAPKPPQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAIL 60

Query: 61  STATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEK 120
           STATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEK
Sbjct: 61  STATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEK 120

Query: 121 GTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAE 180
           GTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAE
Sbjct: 121 GTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAE 180

Query: 181 EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFK 240
           EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFK
Sbjct: 181 EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFK 240

Query: 241 TVGSY 246
           TVGSY
Sbjct: 241 TVGSY 245

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BLAST of CsaV3_7G031150 vs. NCBI nr
Match: XP_008461279.1 (PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis melo] >KAA0058638.1 thylakoid lumenal 19 kDa protein [Cucumis melo var. makuwa] >TYK10445.1 thylakoid lumenal 19 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 447.2 bits (1149), Expect = 9.1e-122
Identity = 236/250 (94.40%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQIPILQSKPPLS-STAPISIAATAIA 60
           MATAIAPLAFLT    STGTTAPK PQ S LPKPQIPILQSK PLS STAPISIAATAIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAIL+TA PSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEY+YDVPEGWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLA+EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 246
           H+SFKTVGSY
Sbjct: 241 HESFKTVGSY 250

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BLAST of CsaV3_7G031150 vs. NCBI nr
Match: XP_038896859.1 (thylakoid lumenal 19 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 442.6 bits (1137), Expect = 2.3e-120
Identity = 231/250 (92.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQIPILQSKPPLS-STAPISIAATAIA 60
           MATAI PLAF +    STGTTAPKPPQ   LPKPQIPILQSKPPLS STAPISIAAT IA
Sbjct: 1   MATAITPLAFFSAAAASTGTTAPKPPQTPPLPKPQIPILQSKPPLSTSTAPISIAATTIA 60

Query: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAILST  PSLADTGAAFNVYYGTAASAANYGGLGGNA+KKDTAEYIYDVPEGWKERLV
Sbjct: 61  VAAILSTTPPSLADTGAAFNVYYGTAASAANYGGLGGNASKKDTAEYIYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKR+EKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRTEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLAEEKKDENGQ+YYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 246
           H+SFKT+GSY
Sbjct: 241 HESFKTIGSY 250

[Close]

BLAST of CsaV3_7G031150 vs. NCBI nr
Match: XP_023547955.1 (thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108
Identity = 212/250 (84.80%), Postives = 226/250 (90.40%), Query Frame = 0


Query: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQ-IPILQSKPPLSSTAPISIAATAIA 60
           MA AI+PLAF +    STGTTAPK PQ     KPQ IPILQSKP LSS   ++ A +AIA
Sbjct: 1   MAAAISPLAFFSAAAASTGTTAPKLPQIPPPQKPQIIPILQSKPSLSS---LTAAGSAIA 60

Query: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           +AAI+ST+ PSLAD G AFNVYYGTAASAANYGGLGGNANKKD+AEY+YDVP+GWKERLV
Sbjct: 61  IAAIVSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNANKKDSAEYVYDVPDGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SF AEEKKDENGQ+YY YEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFSAEEKKDENGQIYYEYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 246
           H+SFKT+GSY
Sbjct: 241 HESFKTIGSY 247

[Close]

BLAST of CsaV3_7G031150 vs. NCBI nr
Match: KAG7025659.1 (Thylakoid lumenal 19 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.3 bits (1022), Expect = 4.9e-107
Identity = 213/253 (84.19%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MATAIAPLAFLT-----STGTTAPKPPQASSLPKPQIPILQSKP--PLSS-TAPISIAAT 60
           MATAI+PLAF +     +TG   PKP Q   LPKP IP+LQS P  PLSS TAPIS    
Sbjct: 1   MATAISPLAFFSAGAAATTGAIVPKPSQTPPLPKPLIPVLQSNPSGPLSSLTAPIS---- 60

Query: 61  AIAVAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKE 120
           AIAVAAILST  PSLAD G AFNVYYGTAASAANYGG GGNA+KKD+AEYIYDVPEGWKE
Sbjct: 61  AIAVAAILSTTPPSLADAGGAFNVYYGTAASAANYGGFGGNASKKDSAEYIYDVPEGWKE 120

Query: 121 RLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIA 180
           RLVSKVEKGTNGTDSEFYNPKKR EKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIA
Sbjct: 121 RLVSKVEKGTNGTDSEFYNPKKRKEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIA 180

Query: 181 SAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDML 240
           SAE F AEEKKDENGQ+YYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEW+RDQDML
Sbjct: 181 SAEGFSAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWDRDQDML 240

Query: 241 RHVHDSFKTVGSY 246
           RHVH+SFKTVGSY
Sbjct: 241 RHVHESFKTVGSY 249

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BLAST of CsaV3_7G031150 vs. ExPASy Swiss-Prot
Match: P82658 (Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g63540 PE=1 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 3.9e-75
Identity = 145/225 (64.44%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 22  PQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAILS--TATPSLADTGAAFNVYYG 81
           P  S+   P +P       ++S    S+AA A+A  ++L+     P+  +    + +YYG
Sbjct: 10  PVISATRTPIVP-----KAIASRLGTSLAA-ALAATSVLTMVPVLPAAGEGNQTYKIYYG 69

Query: 82  TAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKRSEKE 141
           TAASAANYGG GGN+++K +AEY+YDVPEGWKERLVSKVEKGTNGTDSEFYNPKK++EKE
Sbjct: 70  TAASAANYGGYGGNSDRKTSAEYVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKE 129

Query: 142 YLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAEEKKDENGQVYYVYEIDGAG 201
           YLTFLAG RQL P+DVILNNLALSDV LQD IA A+  ++EE+KDE GQVYY+YEIDG G
Sbjct: 130 YLTFLAGFRQLAPRDVILNNLALSDVELQDLIAGADKVVSEERKDETGQVYYLYEIDGVG 189

Query: 202 THSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFKTVGS 245
            HSLI+VTC+KN+LYAHFVNAP PEWNRD D L H+ DSFKTV S
Sbjct: 190 KHSLITVTCSKNRLYAHFVNAPAPEWNRDHDTLTHLRDSFKTVSS 228

[Close]

BLAST of CsaV3_7G031150 vs. ExPASy TrEMBL
Match: A0A0A0K624 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428280 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.4e-130
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MATAIAPLAFLTSTGTTAPKPPQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAIL 60
           MATAIAPLAFLTSTGTTAPKPPQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAIL
Sbjct: 1   MATAIAPLAFLTSTGTTAPKPPQASSLPKPQIPILQSKPPLSSTAPISIAATAIAVAAIL 60

Query: 61  STATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEK 120
           STATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEK
Sbjct: 61  STATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLVSKVEK 120

Query: 121 GTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAE 180
           GTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAE
Sbjct: 121 GTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAESFLAE 180

Query: 181 EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFK 240
           EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFK
Sbjct: 181 EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHVHDSFK 240

Query: 241 TVGSY 246
           TVGSY
Sbjct: 241 TVGSY 245

[Close]

BLAST of CsaV3_7G031150 vs. ExPASy TrEMBL
Match: A0A5D3CG07 (Thylakoid lumenal 19 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00930 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.4e-122
Identity = 236/250 (94.40%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQIPILQSKPPLS-STAPISIAATAIA 60
           MATAIAPLAFLT    STGTTAPK PQ S LPKPQIPILQSK PLS STAPISIAATAIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAIL+TA PSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEY+YDVPEGWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLA+EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 246
           H+SFKTVGSY
Sbjct: 241 HESFKTVGSY 250

[Close]

BLAST of CsaV3_7G031150 vs. ExPASy TrEMBL
Match: A0A1S3CES2 (thylakoid lumenal 19 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499916 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.4e-122
Identity = 236/250 (94.40%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQIPILQSKPPLS-STAPISIAATAIA 60
           MATAIAPLAFLT    STGTTAPK PQ S LPKPQIPILQSK PLS STAPISIAATAIA
Sbjct: 1   MATAIAPLAFLTSTAASTGTTAPKSPQTSPLPKPQIPILQSKSPLSISTAPISIAATAIA 60

Query: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           VAAIL+TA PSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEY+YDVPEGWKERLV
Sbjct: 61  VAAILNTAPPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYVYDVPEGWKERLV 120

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SFLA+EKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 181 SFLADEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240

Query: 241 HDSFKTVGSY 246
           H+SFKTVGSY
Sbjct: 241 HESFKTVGSY 250

[Close]

BLAST of CsaV3_7G031150 vs. ExPASy TrEMBL
Match: A0A6J1JN94 (thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488417 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.0e-107
Identity = 211/250 (84.40%), Postives = 226/250 (90.40%), Query Frame = 0


Query: 1   MATAIAPLAFLT----STGTTAPKPPQASSLPKPQ-IPILQSKPPLSSTAPISIAATAIA 60
           MATAI+PLAF +    STGTTAPK PQ     KPQ IPILQSKP LSS   ++ A +AIA
Sbjct: 24  MATAISPLAFFSAAAASTGTTAPKLPQ-----KPQIIPILQSKPSLSS---LTAACSAIA 83

Query: 61  VAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKERLV 120
           +AAI+ST+ PSLAD G AFNVYYGTAASAANYGGLGGNA+KKD+AEY+YDVP+GWKERLV
Sbjct: 84  IAAIVSTSPPSLADAGPAFNVYYGTAASAANYGGLGGNADKKDSAEYVYDVPDGWKERLV 143

Query: 121 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 180
           SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE
Sbjct: 144 SKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIASAE 203

Query: 181 SFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 240
           SF AEEKKDENGQ+YY YEID AGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV
Sbjct: 204 SFSAEEKKDENGQIYYEYEIDSAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDMLRHV 263

Query: 241 HDSFKTVGSY 246
           H+SFKT+GSY
Sbjct: 264 HESFKTIGSY 265

[Close]

BLAST of CsaV3_7G031150 vs. ExPASy TrEMBL
Match: A0A6J1H7M1 (thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460820 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.4e-106
Identity = 211/253 (83.40%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1   MATAIAPLAFLT-----STGTTAPKPPQASSLPKPQIPILQSKP--PLSS-TAPISIAAT 60
           MATAI+PLAF +     +TG   PKP Q   LPKP IP+LQS P  PLSS +APIS    
Sbjct: 1   MATAISPLAFFSAGAAATTGAIVPKPSQTPPLPKPLIPVLQSNPSGPLSSLSAPIS---- 60

Query: 61  AIAVAAILSTATPSLADTGAAFNVYYGTAASAANYGGLGGNANKKDTAEYIYDVPEGWKE 120
           AIAVAAILST  PSLAD G AFNVYYGTAASAANYGG GGNA+KKD+AEYIYDVPEGWKE
Sbjct: 61  AIAVAAILSTTPPSLADAGGAFNVYYGTAASAANYGGFGGNASKKDSAEYIYDVPEGWKE 120

Query: 121 RLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSDVNLQDQIA 180
           RLVSKVEKGTNGTDSEFYNPKKR EKEYLTFLAGIRQL PKDVILNNLALSDVNLQDQIA
Sbjct: 121 RLVSKVEKGTNGTDSEFYNPKKRKEKEYLTFLAGIRQLAPKDVILNNLALSDVNLQDQIA 180

Query: 181 SAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWNRDQDML 240
           SAE   AEEKKDENGQ+YYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEW+RDQDML
Sbjct: 181 SAEGISAEEKKDENGQIYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPEWDRDQDML 240

Query: 241 RHVHDSFKTVGSY 246
           RHVH+SFKTVGSY
Sbjct: 241 RHVHESFKTVGSY 249

[Close]

BLAST of CsaV3_7G031150 vs. TAIR 10
Match: AT3G63540.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 238.0 bits (606), Expect = 7.8e-63
Identity = 111/140 (79.29%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 105 DVPEGWKERLVSKVEKGTNGTDSEFYNPKKRSEKEYLTFLAGIRQLGPKDVILNNLALSD 164
           +V EGWKERLVSKVEKGTNGTDSEFYNPKK++EKEYLTFLAG RQL P+DVILNNLALSD
Sbjct: 3   EVEEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFLAGFRQLAPRDVILNNLALSD 62

Query: 165 VNLQDQIASAESFLAEEKKDENGQVYYVYEIDGAGTHSLISVTCAKNKLYAHFVNAPTPE 224
           V LQD IA A+  ++EE+KDE GQVYY+YEIDG G HSLI+VTC+KNKLYAHFVNAP PE
Sbjct: 63  VELQDLIAGADKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKNKLYAHFVNAPAPE 122

Query: 225 WNRDQDMLRHVHDSFKTVGS 245
           WNRD D L H+ DSFKTV S
Sbjct: 123 WNRDHDTLTHLRDSFKTVSS 142

The following BLAST results are available for this feature:

BLAST of CsaV3_7G031150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135924.1	9.1e-130	100.00	thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis sativus] >KGN45140.1 hy...	[more]
XP_008461279.1	9.1e-122	94.40	PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Cucumis melo] >KAA00...	[more]
XP_038896859.1	2.3e-120	92.40	thylakoid lumenal 19 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_023547955.1	2.6e-108	84.80	thylakoid lumenal 19 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
KAG7025659.1	4.9e-107	84.19	Thylakoid lumenal 19 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. a...	[more]

BLAST of CsaV3_7G031150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82658	3.9e-75	64.44	Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_7G031150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K624	4.4e-130	100.00	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428280 PE=4 S...	[more]
A0A5D3CG07	4.4e-122	94.40	Thylakoid lumenal 19 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CES2	4.4e-122	94.40	thylakoid lumenal 19 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JN94	4.0e-107	84.40	thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1H7M1	3.4e-106	83.40	thylakoid lumenal 19 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=36...	[more]

BLAST of CsaV3_7G031150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63540.1	7.8e-63	79.29	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 99..240 e-value: 4.1E-11 score: 43.2
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 82..241 e-value: 1.6E-17 score: 65.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..33
None	No IPR available	PANTHER	PTHR31407:SF20	THYLAKOID LUMENAL 19 KDA PROTEIN, CHLOROPLASTIC	coord: 9..242
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 9..242
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 98..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G031150.1	CsaV3_7G031150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding