CsaV3_7G030040 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G030040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	beta-carotene isomerase D27, chloroplastic
Location	chr7: 18987155 .. 18989899 (-)
RNA-Seq Expression	CsaV3_7G030040
Synteny	CsaV3_7G030040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCAGTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTCGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGGTAAGATTTCAATCTTCCCCTCTCCATTTCGGAACTCGTTCGACATGTAAATCAGCTTAATTCTGCTTCATCGTTGTCTTCATTGTCGTTGAATCCATAGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACGACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGTTGTTTTATTTCGAAAGTTCGAATTAGGTTTCGAAGCAAAATGCCATGGTTCAGGTTGTTTATATCTTTAATGAGTGATATCATGGCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTATTTCTTTTTCGAGATATATGCGTAGAGATAGAGCATCTAATTCTTTTATAACTCTTTGAACATCCGAGAGTGATTGAAAATTGTATTAGAAACTAGCCAGCTTCGTAGATTTCATTACGAAATTATGGTTATTGCTGCAGGTTCGGATTTTAATAGCTCTGTTTCCTCCTCTTCTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGGTGAGTTAAGCCTTCAGCCTTTATCTGTATCTTCAAATCAGGTTAATTATAAAAAATTAACCAGTGGATACATAAAATTTATTGACCCGGGCTTCTTGTAACTTAGAAAAAAATAAAAATCTGGAAAAAAAAACTACGTAAGTAAAACTTAACTCTGGTTGGAAGGAGGCTGACAAGCATAGTGTCTACAAATATTAAACTCATTGGTTTTGTTTATCCATATTATATAAAGACAATAAAGTTGAGGGGCTCAGGCTCCCTGGGCCTATACTAAATCTGTGGGTGCCTTGAACTATGTTTGAAATTAAGACATGGAATAGTGTAGTGACAACTTTAAACGGAGATTTGAATCACCATACAGTTCTAGGTCACCACCATAACATTTCAATCCTTGTTGACCGTCTAAAATTTAATTGATTTTTACTCTAAGTGTAGTTTTGAAATGTTTACGGGAGTTTAAGAGTACTATTGCAATTTTAGGATGTATAAGAATATTTTCGAAATAGATGGAAAAGTTTTTGGAGTATTCCTTATGATTGAGCCCTGTAAATTATAATTTGGATCGAATTGTGTGTGATTATATAACAAATTCCATCAAAACTTAGATAAAACGTCGAAGAGTAGTACTATATTTGGGTGTTCAATTGGGAAGTAGATCCCTTGTTGCACTATAAAAAGTTTGGATTTGATTCCTTTTTAGTTGGACATCAGTTACTTTCGTTTGTTTGACTTATATCTGTCTGGTGTAAAATTTTGAATATTAGTTGAACTGCTCTGCTCCCTTTTTTCTTCTTCTATGTTAAAGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTATAAAATAAAATATTGATTTCTATATTCATGAATTTCAACCGAATAGTCAAAGCTTGTTTTTCACTTTGGTGCTCTTTTATGCAGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGGTTTGTTCTTAAAAATCTATATATCTTATCTCTTTCTTTACATTACTGGTTATTTGGGAACACCTTGTTCATTCGAGTGTCTTCATTCTTCATACATTATTCATTTGTCTCGACTTGAACCAATCTCAACAATCTTGATTCTGATGTAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGGTAATTATTCTATTGCTTAGCTCAACATTTCTGTTGTACTAATGGATAACAATGTGGGTTGAAGTAGAACGTTTCCTGTTACATGATATCGTATCAGATTAATATGATGCATCTCTGTTTAAGCTTTTAACCAAACAATGTTGTTGACAGTCTGACATTTATAGGCTCTAATTTTATGAAGATTACATTAGTGTAATTTCCTATGAAATGGAATAAATTAAATCCATTAGTTGGTGACTTCTTTGGAAACTAGTGTATGCAACGTGTTGTCGCAGTCTTTGATTTTGATCATATGGTGGCTGAATTTAACAGATTTGGGAGGGAAACATACGTTCCAGCTATAAACCATCTGTTTAATGATACCCATCAGTACCTTACATGAATCTATAGATATTTCATTTCATTTTGCCTAAATTTATTTGAAAAATTCTCCTATTCTTTCCAAAATTATAGAATTACCATTGATCTTTCATAAACCTCCCAAAAGGGAAGAGTAGAGAATATACATAACTACCTTTTTGGTTTAACCTTTCCCTTTTCTTCCTCGTGTCGCAACTGAATTGACAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAGTGCAGCACAGTGTCCAAAAGCATAG

mRNA sequence

ATGAAGCCAGTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTCGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACGACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTTCGGATTTTAATAGCTCTGTTTCCTCCTCTTCTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAGTGCAGCACAGTGTCCAAAAGCATAG

Coding sequence (CDS)

ATGAAGCCAGTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTCGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACGACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTTCGGATTTTAATAGCTCTGTTTCCTCCTCTTCTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAGTGCAGCACAGTGTCCAAAAGCATAG

Protein sequence

MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILDDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEICPNATRRREVSGKISAAQCPKA*

Homology

[Close]

BLAST of CsaV3_7G030040 vs. NCBI nr
Match: KGN45022.1 (hypothetical protein Csa_016689 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD
Sbjct: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRREVSGKISAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKISAAQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. NCBI nr
Match: XP_004135988.2 (beta-carotene isomerase D27, chloroplastic [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD
Sbjct: 47  MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL
Sbjct: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE
Sbjct: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRREVSGKISAAQCPKA
Sbjct: 287 PCLEICPNATRRREVSGKISAAQCPKA 313

[Close]

BLAST of CsaV3_7G030040 vs. NCBI nr
Match: KAA0046701.1 (beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK18237.1 beta-carotene isomerase D27 [Cucumis melo var. makuwa])

HSP 1 Score: 521.2 bits (1341), Expect = 5.4e-144
Identity = 257/267 (96.25%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKP+ALLLHPPTIS APLRF SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPMALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. NCBI nr
Match: XP_008451473.1 (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo])

HSP 1 Score: 521.2 bits (1341), Expect = 5.4e-144
Identity = 257/267 (96.25%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKP+ALLLHPPTIS APLRF SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPLALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. NCBI nr
Match: XP_038898256.1 (beta-carotene isomerase D27, chloroplastic [Benincasa hispida])

HSP 1 Score: 481.5 bits (1238), Expect = 4.8e-132
Identity = 239/267 (89.51%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKP+A LL PPTIS APLRFT SKSHLRN P  LSCSALQS SIK+  SSK EYKPG+LD
Sbjct: 1   MKPLA-LLRPPTISSAPLRFTFSKSHLRNHPLNLSCSALQSESIKNETSSKPEYKPGLLD 60

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           +FFLNVFRSKMVQEVGWDSEKPGYDGLIEVA+RLT  GKTNS+TIEASVRIL ALFPPLL
Sbjct: 61  EFFLNVFRSKMVQEVGWDSEKPGYDGLIEVANRLTTKGKTNSDTIEASVRILTALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           L LYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNS ELPDGSSCQSGVFVEKCKY
Sbjct: 121 LDLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSFELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKD+MGIPLLMEPNF DYSCQFKFGVLPPLPEED ILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDRMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDGILKE 240

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRRE+SGK+SA QCPKA
Sbjct: 241 PCLEICPNATRRREISGKMSATQCPKA 266

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 66/195 (33.85%), Postives = 110/195 (56.41%), Query Frame = 0


Query: 58  ILDDFFLNV---FRSKMVQE---VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRI 117
           I D FF  +   + SK +Q+   +   S+   YD L++ A+R++    T  +  E  +  
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQH-EFVLSS 124

Query: 118 LIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQS 177
           L    P ++  L ++   P    KV+  + A  T ++  WL+G   V   E+ +G   +S
Sbjct: 125 LDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRKEKS 184

Query: 178 GVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPL 237
            V++EKC++LE+S C+G+C + CK+P+Q F K+ +G+P+ MEP+F D SC+  FG  PP 
Sbjct: 185 VVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPE 244

Query: 238 PEEDSILKEPCLEIC 247
            E+D  +K+PC E C
Sbjct: 245 IEDDPAMKQPCFEFC 254

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 76/227 (33.48%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 27  LRNRP---FILSCSALQSGSIKDGASSKAE-YKPGILDDFFLNVFRSKMVQEVGWDSEKP 86
           LR +P   F++   A  +  I +    K   YK    D   +N     +    G  + K 
Sbjct: 22  LRLKPKHTFVVGVLARPTDDISEETLRKTNVYKDNWFDKLAINHLSKSVQAATGISNNKS 81

Query: 87  GYDGLIEVASRLTMTGKTNSETIEASVRILIAL---FPPLLLKLYRILVSPIAGGKVAAI 146
           G+D L+E A   T+  +  + T +  + IL AL   FP  +L + R ++ P    K+A  
Sbjct: 82  GFDSLVEAA---TVASQKFNTTQQQGI-ILDALDRAFPKPILSVIRRVMPP---SKLARE 141

Query: 147 MVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKLPTQ 206
             A  T +   WL+G   V   E+ +G   ++ V ++KC++LEE+ C+G+CIN CK+P+Q
Sbjct: 142 YFAVFTTIFFAWLLGPSEVRESEI-NGRREKNIVHIKKCRFLEETNCVGMCINLCKMPSQ 201

Query: 207 SFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEIC 247
            F KD  G+P+ M PNF D SC+  FG  PP   +D  LK+PC ++C
Sbjct: 202 LFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLC 240

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 61/192 (31.77%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 54  YKPGILDDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVA---SRLTMTGKTNSETIEASVR 113
           Y+    D   +      + +  G  +EK GY+ LI+ A   SR+    K +    +A  R
Sbjct: 80  YRDSWFDKLAIGYLSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALER 139

Query: 114 ILIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQ 173
            L    P  +L + ++++ P    + +    A  T +   WL+G C V   E+ +G   +
Sbjct: 140 AL----PSYILTMIKVMMPP---SRFSREYFAAFTTIFFPWLVGPCEVMESEV-EGRKEK 199

Query: 174 SGVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPP 233
           + V++ KC++LE + C+G+C N CK+P Q F +D +G+ + M PNF D SC+  FG  P 
Sbjct: 200 NVVYIPKCRFLESTNCVGMCTNLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQP- 259

Query: 234 LPEEDSILKEPC 243
            PE+D  LK+PC
Sbjct: 260 -PEDDPALKQPC 261

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy TrEMBL
Match: A0A0A0K9J2 (DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407750 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD
Sbjct: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRREVSGKISAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKISAAQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy TrEMBL
Match: A0A5D3D2R7 (Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001770 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 257/267 (96.25%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKP+ALLLHPPTIS APLRF SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPMALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy TrEMBL
Match: A0A1S3BRJ4 (beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492751 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 257/267 (96.25%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60
           MKP+ALLLHPPTIS APLRF SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPLALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSGKISAAQCPKA 268
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy TrEMBL
Match: A0A6J1H551 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460668 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.5e-128
Identity = 234/268 (87.31%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 1   MKPVALLLHPP-TISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGIL 60
           MKPV LLLHPP TIS A LRF SSKSHLR RP  +SC A+QS S K   SSK EYKPG+L
Sbjct: 1   MKPVVLLLHPPATISSAALRF-SSKSHLRKRPLNISCFAVQSESTKVEVSSKPEYKPGML 60

Query: 61  DDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPL 120
           DDFFLN+FRSKMVQEVGWDSEKPGYDGLIEVA+RLTM GK+NS+TIEASVRILIALFPPL
Sbjct: 61  DDFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPL 120

Query: 121 LLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180
           LL+LYR+LVSPIAGGKVAAIMVARVTA TCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK
Sbjct: 121 LLELYRMLVSPIAGGKVAAIMVARVTAFTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180

Query: 181 YLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILK 240
           YLEESKCIGIC+NTCK PTQSFFK+QMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILK
Sbjct: 181 YLEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILK 240

Query: 241 EPCLEICPNATRRREVSGKISAAQCPKA 268
           EPCLEICPNATRRREV  K+SA QCPKA
Sbjct: 241 EPCLEICPNATRRREVLNKMSATQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. ExPASy TrEMBL
Match: A0A6J1KWU1 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497865 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127
Identity = 234/268 (87.31%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 1   MKPVALLLHPP-TISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGIL 60
           MKPVALLLHPP TIS A LRF SSKSHLR RP   SC A+QS S K   SSK +YKPG+L
Sbjct: 1   MKPVALLLHPPATISSAALRF-SSKSHLRKRPLNFSCFAVQSESTKVEVSSKPDYKPGML 60

Query: 61  DDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPL 120
           DDFFLN+FRSKMVQEVGWDSEKPGYDGLIEVA+RLTM GK+NS+TIEASVRILIALFPPL
Sbjct: 61  DDFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPL 120

Query: 121 LLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180
           LL+LYR+LVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK
Sbjct: 121 LLELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180

Query: 181 YLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILK 240
           YLEESKCIGIC+NTCK PTQSFFK+QMGIPLLMEPNF DYSCQFKFGV PPLPEEDSILK
Sbjct: 181 YLEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVPPPLPEEDSILK 240

Query: 241 EPCLEICPNATRRREVSGKISAAQCPKA 268
           EPCLEICPNATRRREV  K+SA QCPKA
Sbjct: 241 EPCLEICPNATRRREVLSKMSATQCPKA 267

[Close]

BLAST of CsaV3_7G030040 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 302.4 bits (773), Expect = 3.7e-82
Identity = 157/265 (59.25%), Postives = 193/265 (72.83%), Query Frame = 0


Query: 4   VALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPGILDDF 63
           + +LL PPT       F S+K  L  R   L C    S  +K D  + K EYKPG LDDF
Sbjct: 5   IQVLLPPPTTIVFSNSF-STKLILTRR---LRCRISNSSEVKSDEGAPKLEYKPGPLDDF 64

Query: 64  FLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLK 123
           F+  FR+K+V+EVG DSEKPGY GLIE+   L + G+T SET +A+VRIL +LFPPL+L+
Sbjct: 65  FMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILE 124

Query: 124 LYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLE 183
           LY++L++PIA GK+AA+MVARVT LTCQWLMG   VN I+LP+G S  SGVFVEKC+YLE
Sbjct: 125 LYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLE 184

Query: 184 ESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPC 243
           ESKC+G+CINTCKLPTQ+FFKD MG+PL+MEPNF DYSCQFKFGV P  PE+D  + EPC
Sbjct: 185 ESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAP--PEDDGNVNEPC 244

Query: 244 LEICPNATRRREVSGKISAAQCPKA 268
            E C  A RR     K+ + +CP A
Sbjct: 245 FETCSIAGRR-----KLKSGECPLA 258

[Close]

BLAST of CsaV3_7G030040 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-31
Identity = 78/223 (34.98%), Postives = 124/223 (55.61%), Query Frame = 0


Query: 51  KAEYKPGILDDFFLNVFRSKM----------VQEVG-WDSEKPGYDGLIEVASRLTMTGK 110
           K  Y+ G+++  F+ +F  KM           +E G W+ +   Y+  +EV+ R+ M G+
Sbjct: 36  KTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYD---YESFVEVSKRV-MQGR 95

Query: 111 TNSETIEASVRILIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVN 170
           +  +  EA   +L+++ PP   + +R L  P    K AA   A +T     WL+G   V 
Sbjct: 96  SRVQQQEAVREVLLSMLPPGAPEQFRKLFPPT---KWAAEFNAALTVPFFHWLVGPSQVI 155

Query: 171 SIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDY 230
            +E+ +G   +SGV ++KC+YLE S C+G+C+N CK+PTQ FF ++ G+PL M PN+ D 
Sbjct: 156 EVEV-NGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDM 215

Query: 231 SCQFKFGVLPPLPEEDSILKEPCL-EICPNATRRREVSGKISA 262
           SC+  +G  PP  EED   K+PCL +IC  +     +  K+ A
Sbjct: 216 SCEMIYGQAPPAFEEDVATKQPCLADICSMSNPSSPICPKLEA 250

[Close]

BLAST of CsaV3_7G030040 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27
Identity = 66/195 (33.85%), Postives = 110/195 (56.41%), Query Frame = 0


Query: 58  ILDDFFLNV---FRSKMVQE---VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRI 117
           I D FF  +   + SK +Q+   +   S+   YD L++ A+R++    T  +  E  +  
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQH-EFVLSS 124

Query: 118 LIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQS 177
           L    P ++  L ++   P    KV+  + A  T ++  WL+G   V   E+ +G   +S
Sbjct: 125 LDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRKEKS 184

Query: 178 GVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPL 237
            V++EKC++LE+S C+G+C + CK+P+Q F K+ +G+P+ MEP+F D SC+  FG  PP 
Sbjct: 185 VVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPE 244

Query: 238 PEEDSILKEPCLEIC 247
            E+D  +K+PC E C
Sbjct: 245 IEDDPAMKQPCFEFC 254

The following BLAST results are available for this feature:

BLAST of CsaV3_7G030040 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45022.1	2.5e-149	100.00	hypothetical protein Csa_016689 [Cucumis sativus]	[more]
XP_004135988.2	2.5e-149	100.00	beta-carotene isomerase D27, chloroplastic [Cucumis sativus]	[more]
KAA0046701.1	5.4e-144	96.25	beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK18237.1 beta-carotene...	[more]
XP_008451473.1	5.4e-144	96.25	PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo]	[more]
XP_038898256.1	4.8e-132	89.51	beta-carotene isomerase D27, chloroplastic [Benincasa hispida]	[more]

BLAST of CsaV3_7G030040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA78	1.6e-26	33.85	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]
R4HZ96	1.6e-26	33.48	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	1.3e-23	31.77	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of CsaV3_7G030040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9J2	1.2e-149	100.00	DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407750 PE=...	[more]
A0A5D3D2R7	2.6e-144	96.25	Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BRJ4	2.6e-144	96.25	beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034927...	[more]
A0A6J1H551	4.5e-128	87.31	beta-carotene isomerase D27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KWU1	1.3e-127	87.31	beta-carotene isomerase D27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CsaV3_7G030040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01995.1	3.7e-82	59.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	1.0e-31	34.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.1	1.2e-27	33.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 151..233 e-value: 5.1E-34 score: 116.1
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 35..267
None	No IPR available	PANTHER	PTHR33591:SF2	BETA-CAROTENE ISOMERASE D27	coord: 35..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G030040.1	CsaV3_7G030040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005506	iron ion binding