Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGACCCTGGATTTTGTGGTGTGAATTGTTCTTGTGATTATCTTGTTCAATATCCCGATCATCAACCTTTGCATTTAGTTCCACACCATGTTGGCTGCTCTTCACACCCTGTTGTTACCTCCTCTTCAAACCCTGTTGTTGGATCCTCTTCAAACCATATTGTTGGCTCCTCTTCAAATCCTGTTGTTGGATCTTCTTCAAATCATATTGTTGACTCCTCTTCAAATCCTGTTGTTGGATCCTCTTCAAACCATGTTGTTGGCTCCTCTTCAAACCCTGTTGTTGACTCCTCTTCGTCCGGAATCGACGTCAATGGTCGTCGAGTTGGAAGAAAAGGTTCTTCAAAACCTAAAGCTTCAAAGAAGAAAAATGGTTACCATCATGTTCAAGGAGTGAGGAGACAACGACTCATTTGGACTACAGAACTCCATCAGTGTTTTGTTGAGATTTTTAATCGTACACCTTGCACAC
mRNA sequence
ATGGAAGACGACCCTGGATTTTGTGGTGTGAATTGTTCTTGTGATTATCTTGTTCAATATCCCGATCATCAACCTTTGCATTTAGTTCCACACCATGTTGGCTGCTCTTCACACCCTGTTGTTACCTCCTCTTCAAACCCTGTTGTTGGATCCTCTTCAAACCATATTGTTGGCTCCTCTTCAAATCCTGTTGTTGGATCTTCTTCAAATCATATTGTTGACTCCTCTTCAAATCCTGTTGTTGGATCCTCTTCAAACCATGTTGTTGGCTCCTCTTCAAACCCTGTTGTTGACTCCTCTTCGTCCGGAATCGACGTCAATGGTCGTCGAGTTGGAAGAAAAGGTTCTTCAAAACCTAAAGCTTCAAAGAAGAAAAATGGTTACCATCATGTTCAAGGAGTGAGGAGACAACGACTCATTTGGACTACAGAACTCCATCAGTGTTTTGTTGAGATTTTTAATCGTACACCTTGCACAC
Coding sequence (CDS)
ATGGAAGACGACCCTGGATTTTGTGGTGTGAATTGTTCTTGTGATTATCTTGTTCAATATCCCGATCATCAACCTTTGCATTTAGTTCCACACCATGTTGGCTGCTCTTCACACCCTGTTGTTACCTCCTCTTCAAACCCTGTTGTTGGATCCTCTTCAAACCATATTGTTGGCTCCTCTTCAAATCCTGTTGTTGGATCTTCTTCAAATCATATTGTTGACTCCTCTTCAAATCCTGTTGTTGGATCCTCTTCAAACCATGTTGTTGGCTCCTCTTCAAACCCTGTTGTTGACTCCTCTTCGTCCGGAATCGACGTCAATGGTCGTCGAGTTGGAAGAAAAGGTTCTTCAAAACCTAAAGCTTCAAAGAAGAAAAATGGTTACCATCATGTTCAAGGAGTGAGGAGACAACGACTCATTTGGACTACAGAACTCCATCAGTGTTTTGTTGAGATTTTTAATCGTACACCTTGCACAC
Protein sequence
MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTX
Homology
BLAST of CsaV3_7G029690 vs. NCBI nr
Match:
KAE8646357.1 (hypothetical protein Csa_015615, partial [Cucumis sativus])
HSP 1 Score: 318.2 bits (814), Expect = 4.2e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60
MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS
Sbjct: 1 MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60
Query: 61 SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120
SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK
Sbjct: 61 SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120
Query: 121 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 160
ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT
Sbjct: 121 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 159
BLAST of CsaV3_7G029690 vs. NCBI nr
Match:
XP_031745104.1 (probable serine/threonine-protein kinase cdc7 [Cucumis sativus])
HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66
Identity = 135/144 (93.75%), Postives = 137/144 (95.14%), Query Frame = 0
Query: 1 MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60
MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS
Sbjct: 1 MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60
Query: 61 SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120
SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK
Sbjct: 61 SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120
Query: 121 ASKKKNGYHHVQGVRRQRLIWTTE 145
ASKKKNGYHHVQG+ + T E
Sbjct: 121 ASKKKNGYHHVQGMSEKYPFVTRE 144
BLAST of CsaV3_7G029690 vs. NCBI nr
Match:
KAA0046669.1 (hypothetical protein E6C27_scaffold427G00360 [Cucumis melo var. makuwa] >TYK18204.1 hypothetical protein E5676_scaffold411G001430 [Cucumis melo var. makuwa])
HSP 1 Score: 134.8 bits (338), Expect = 6.5e-28
Identity = 77/157 (49.04%), Postives = 85/157 (54.14%), Query Frame = 0
Query: 3 DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 62
+D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH
Sbjct: 2 EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHS----------------------- 61
Query: 63 PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 122
V SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62 ----------------------------------VGCSSSGINLDRRRVGRKSSSKPKAS 101
Query: 123 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 160
KKKNGYH QG ++QRLIWT ELHQCFV+IFNRTP T
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPST 101
BLAST of CsaV3_7G029690 vs. NCBI nr
Match:
XP_016901048.1 (PREDICTED: uncharacterized protein LOC107991159 [Cucumis melo])
HSP 1 Score: 134.8 bits (338), Expect = 6.5e-28
Identity = 77/157 (49.04%), Postives = 85/157 (54.14%), Query Frame = 0
Query: 3 DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 62
+D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH
Sbjct: 2 EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHS----------------------- 61
Query: 63 PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 122
V SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62 ----------------------------------VGCSSSGINLDRRRVGRKSSSKPKAS 101
Query: 123 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 160
KKKNGYH QG ++QRLIWT ELHQCFV+IFNRTP T
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPST 101
BLAST of CsaV3_7G029690 vs. NCBI nr
Match:
XP_038896348.1 (two-component response regulator ORR25-like [Benincasa hispida])
HSP 1 Score: 75.1 bits (183), Expect = 6.1e-10
Identity = 56/156 (35.90%), Postives = 72/156 (46.15%), Query Frame = 0
Query: 2 EDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSS 61
E + GF GV SCDY+VQ P +Q L L+PH +G +S
Sbjct: 10 EREGGFGGVKGSCDYIVQSP-NQSLQLIPHPIGFNS------------------------ 69
Query: 62 NPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKA 121
+S+N S+ ID R+ +K SSKPKA
Sbjct: 70 ----------------------------STSANANSVQISTRIDDRRVRI-KKRSSKPKA 111
Query: 122 SKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTP 158
SKKK+GYH QG ++ RLIWT ELHQ F+EI NR+P
Sbjct: 130 SKKKDGYHQRQGAKKPRLIWTPELHQHFLEIHNRSP 111
BLAST of CsaV3_7G029690 vs. ExPASy TrEMBL
Match:
A0A0A0K9E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405930 PE=4 SV=1)
HSP 1 Score: 318.2 bits (814), Expect = 2.0e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60
MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS
Sbjct: 1 MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60
Query: 61 SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120
SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK
Sbjct: 61 SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120
Query: 121 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 160
ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT
Sbjct: 121 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 159
BLAST of CsaV3_7G029690 vs. ExPASy TrEMBL
Match:
A0A5D3D3H7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001430 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 3.2e-28
Identity = 77/157 (49.04%), Postives = 85/157 (54.14%), Query Frame = 0
Query: 3 DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 62
+D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH
Sbjct: 2 EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHS----------------------- 61
Query: 63 PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 122
V SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62 ----------------------------------VGCSSSGINLDRRRVGRKSSSKPKAS 101
Query: 123 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 160
KKKNGYH QG ++QRLIWT ELHQCFV+IFNRTP T
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPST 101
BLAST of CsaV3_7G029690 vs. ExPASy TrEMBL
Match:
A0A1S4DYK0 (uncharacterized protein LOC107991159 OS=Cucumis melo OX=3656 GN=LOC107991159 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 3.2e-28
Identity = 77/157 (49.04%), Postives = 85/157 (54.14%), Query Frame = 0
Query: 3 DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 62
+D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH
Sbjct: 2 EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHS----------------------- 61
Query: 63 PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 122
V SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62 ----------------------------------VGCSSSGINLDRRRVGRKSSSKPKAS 101
Query: 123 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 160
KKKNGYH QG ++QRLIWT ELHQCFV+IFNRTP T
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPST 101
BLAST of CsaV3_7G029690 vs. ExPASy TrEMBL
Match:
A0A0D2VG72 (Uncharacterized protein OS=Capsaspora owczarzaki (strain ATCC 30864) OX=595528 GN=CAOG_000428 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 9.0e-07
Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 0
Query: 33 VGCSSHPVVTSSSNPVVGSSSNHIVGSSSNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSS 92
V S+ PVV SS+ PVV SSS +V SSS PVV SSS +V+SSS PVV SSS VV SS
Sbjct: 571 VESSTRPVVESSTRPVVESSSRPVVESSSRPVVESSSRPVVESSSRPVVESSSRPVVESS 630
Query: 93 SNPVVDSSSSGIDVNGRRVGRKGSSKPKASKKK 126
S PVV+SSS + + R + SS+P S +
Sbjct: 631 SRPVVESSSRPVVESSSRPVVESSSRPIVSSSR 663
BLAST of CsaV3_7G029690 vs. ExPASy TrEMBL
Match:
A0A6J1KVU3 (two-component response regulator ARR11-like OS=Cucurbita maxima OX=3661 GN=LOC111498058 PE=4 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06
Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 0
Query: 57 VGSSSNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGR------- 116
V S V G +++IV ++ + V NPV SSG DV+GR
Sbjct: 23 VPSDGFDVHGGGADYIVQPTAPNQPSKDNPSFVSPDVNPVGVPHSSG-DVDGRVTILPVI 82
Query: 117 --RVGRKGSSKPKASKKKNGYHHVQ-GVRRQRLIWTTELHQCFVEIFNRTP 158
R GRK S K K+SKKKNGY+H + G +++RLIWT ELHQCF+E +N+ P
Sbjct: 83 DDRTGRKTSLKAKSSKKKNGYYHRRNGEKKERLIWTPELHQCFLEYYNKFP 132
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8646357.1 | 4.2e-83 | 100.00 | hypothetical protein Csa_015615, partial [Cucumis sativus] | [more] |
XP_031745104.1 | 2.7e-66 | 93.75 | probable serine/threonine-protein kinase cdc7 [Cucumis sativus] | [more] |
KAA0046669.1 | 6.5e-28 | 49.04 | hypothetical protein E6C27_scaffold427G00360 [Cucumis melo var. makuwa] >TYK1820... | [more] |
XP_016901048.1 | 6.5e-28 | 49.04 | PREDICTED: uncharacterized protein LOC107991159 [Cucumis melo] | [more] |
XP_038896348.1 | 6.1e-10 | 35.90 | two-component response regulator ORR25-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K9E6 | 2.0e-83 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405930 PE=4 SV=1 | [more] |
A0A5D3D3H7 | 3.2e-28 | 49.04 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S4DYK0 | 3.2e-28 | 49.04 | uncharacterized protein LOC107991159 OS=Cucumis melo OX=3656 GN=LOC107991159 PE=... | [more] |
A0A0D2VG72 | 9.0e-07 | 52.69 | Uncharacterized protein OS=Capsaspora owczarzaki (strain ATCC 30864) OX=595528 G... | [more] |
A0A6J1KVU3 | 2.0e-06 | 42.34 | two-component response regulator ARR11-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
Match Name | E-value | Identity | Description | |