CsaV3_7G029650 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G029650
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionprotein DEHYDRATION-INDUCED 19-like
Locationchr7: 18752441 .. 18755866 (-)
RNA-Seq ExpressionCsaV3_7G029650
SyntenyCsaV3_7G029650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGTAAGACTGAAATATACCTCTAGATGTCTAGGCATATTAATATATGATGCTTTTTATCTGACTCAAAATTAAGCACTTTCTGCATGCATCCGTTTCACCACAATTATAGTTTTTGCTGGTTCCTAGGCATGCATTCTGGTTTAGGTTTGTTATTAAATTTATTTCTCGCAGACATATCATTTGCTTCTTCCTATGAGTTTCGATAGCCTTGAGTTACTGTTGTGACTTGTGAGCGTCACAATATGTTCACAGTTCATTGGTGGTACATAGCTCATATCTTTTTCACAATGGGGAAAAATTGACGAGGCCTTGAAATTAGCACTTGCATCACTAGAATATAGTATAACCAAAATGCATTTAAAATGTAGGAGTTGAAGTCCATCAAAATTCCTTCTAATCAAAACGTGCTTTTGGACAATTATAATGATAATACCCAGAATTATATATGGTTGAGCTACAATAGAATGTAGAAGTTTGATATTTGTAATATAATAATATCAAGGCCTCGATGTTTTTGGACTAAAATGTATGGGCTTATTCTGGGAGGTGAATGTTAGATGGGATTAAATAACAATTGCATAAAGTAGTGAACATTTAGTTCTATTCCCTATCTAAATGCATGTTAGGTGATACTGTGCGGTCTTTCAGTTTTCATTTCCCTCAAGTGTTACAGTGGTCGTTGCGATTTTGGAATTATACTGTCATATGAGCTGTAAATGAACCTGTATCAATTTCATACCTTTGCATTTGGATCCATTTAACTAATGGCATTAAATTGCTATTCATTTCTCATGTTGATCGAGTTATATTTGCTCTTCCCCACTGTCTTAGCAATCGCAGCAAGTCTATAACTTCTGTGATGGAGATAACTCATATCCTATAATCGGCATCTCCAACCTAATGATATTTTATTTGCACATATGCAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATGTTAGGCAATGATTTATAATAGAGAGCACAGAGGCAGAAGAGGAAAGTTATATCAAAATTTTAGGAAATGCTATTATTTTTAGTGTTTTTATTTCAATGTTTATATTACTCTTGTGAGAACATGTAGGAATTGAAGTGTATCAACGTGGGTTAGTAAATATTAGCTAGAAGGTGTAAGCATTATCCAAGTTATTTTCCTGGTTATGGAAATGCAGTTGGTGTTCTTCAATCAAAGATTAGTATTAGTAAATTGGTAGTCAAGATGAATGAGCTTGTAAATTTGGTTTAAGAAGTTAACCTTACTATGACTCGAGACTATTATCAAGTTTCAACCTAACAAGGACCTAATGTTTTTTTAATTAAAATTAAGTACTAGAATCTTACAGTTGAATTAGCAGTTTAGTCTCTATAGCCCAGATTTTGTTCCATATGGTACTGATGTTTTTGAATTTTTATTCGATTTTTGTGGTTTGATCAAATTTGACCGACGGTGTCTTTTGATAGTGTTATCAATGTTATGTTTTCACTCATTTTTCATAAATTATCTATCAAAATACAAAGAAATTTTTGGTTTTCAAATTGATCTCTAAAATATTTTAGAAAAGTGTAGAAACCAAAATGAGTTTGATAGCGTTGCATAAGTCCATTACAAAGAAACATTAACCAAAGGAGGATGAATTTGTCTTTTGTTCCTATCACGATTTAAGTGTAGCATGACATACCTAATTTGAAAGTTTGTCCAGGATGGTATGAATCAAGTGTTGGGTTATGTGAGTTTGAAAAATAATGTGAATTTTATCGCTTGCTCAAGTCTTAGATCAATGTTGTTAAATCTACGATACCTTCTTGATAAACTAAATCCTAAACACAAAATGTTGTCTAATCCCAACTTAAGCATAATATTATAACTGATAACAATTTTTTCTTTTAGAAAAATAAAAGTTACGTTCCAACCACCAATAAAAAAATATGCATGTGAGTATAATTTAACTTTCATATTATGTATCATCAATTTCAAAGTTAGATGTTCAAATTTCTTTCCTTCGTGCTGAACTCAATGAAAATAAATAAATAATACATAAGACTTATAGCTATATAAACACGATTGATGAGTAGAGTATTCTAATAATTAGACCTGAGGTTGGTTAGGTGTTTTGGGTTATAAATAAGAGGGAGAGCAAGGTTAGAGGGGTGGGAGAGTTTGGTGGGTGTTCGGCTCTTGAGACAGAATGCTCAACCCTTTATAATGTGCTTTGGAATTTTTGGTTAGGCTTGTAATGGTTTCCTATGGTGGACATTGTTGCTTATAATACAATTGTGTTTTTGTGGAAGAAAACCCCTAACACAATAAAGAAAGATCAAGTGTGCATATCTAGAACAATGCACTCTTGACCTTTTACAACCTAATTTGATTTATTGGTCAACATATTTTTAAGTTAAAAGATGCTAATTATATATAACTACTCTTGAACTCTCTTTAGTTTCAAAAGTTTTTATGTACTTTTAATACTTCAATGTTATCCTAAAGTTTTAGAATCTTTTATTTTGAATTTTGGACAAAAACAAAAAATCAAAACTTTGGGCAATAAATGAATTCAAGTTTTTGTTTGAGGTCATCTATCACATTTGTTTTTTTGTTTGAAATGCTAAAAAAGATTCTATCATGTACAGACCATTTTTTTAAATGGAAAAAGTTCACAAATCCACAATGTAAAATACCAAAATTATCCTAGTCACACACGCGATAAATTAGTTGTACACGCGATACTCAATCGTGTAGGTTTTAATACACGATATCGGGCATACCAGACATCGAGATGAAATTTTATTGCCTTTAATTCATTCAATATCTGTCATATAATGCATCAAGATGAAAGACAAAAGTGTAAATCTACACAATCATGTACTTTGTTTTAAACTATTGACTTTCATATTTAAATGATCGTGTAGATCATGAGATACGATCTTTAGTTGCTCCAAGATGCTTCGAGATAAAAGAATTCTAACTTTAATATATTCCATCGTGAGTTTATAATGTCCCAAAATGTCCTTAATGAAAGAATTATTCCGTTTGTTATTAGATCTCGGACTTTAGTGACATTGAGATGATTCAATCTTTATTTTATTCGATTTTAGACATACGCTGCCTTTAGATGACCTAAGATTAATAAATGGTGAGAGCATATATGAGCTTTTCTTATTTTGGGTTTTGTTAGAATGATGTAAATTGCTCCATAAAGTTGTATTGTTTATAATAATGTAGTGGGGATGATAAGTGA

mRNA sequence

ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATTGGGGATGATAAGTGA

Coding sequence (CDS)

ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATTGGGGATGATAAGTGA

Protein sequence

MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKTRRCDFVRDLVFSVIGDDK*
Homology
[Close]
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: KAE8646355.1 (hypothetical protein Csa_015805 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 6.1e-35
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
          MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT
Sbjct: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60

Query: 61 RRCDFVRDLVFSVIGDDK 79
          RRCDFVRDLVFSVIGDDK
Sbjct: 61 RRCDFVRDLVFSVIGDDK 78

[Close]
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_004136009.1 (protein DEHYDRATION-INDUCED 19 homolog 4 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 4.8e-32
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT
Sbjct: 140 MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 199

Query: 61  RRCDFVRDLVFSV-IGDD 78
           RRCDFVRDLVFSV +G+D
Sbjct: 200 RRCDFVRDLVFSVMLGND 217

[Close]
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_008451522.1 (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPVINESKTVQPEPS+KEK+EEKVVDDTLSERDVQLSSIPD NQEEKT
Sbjct: 140 MAPDPLLSFLCNAPVINESKTVQPEPSSKEKMEEKVVDDTLSERDVQLSSIPDTNQEEKT 199

Query: 61  RRCDFVRDLVFSV-IGDD 78
           RRCDF+RDLVFSV +GDD
Sbjct: 200 RRCDFIRDLVFSVMLGDD 217

[Close]
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_038900025.1 (protein DEHYDRATION-INDUCED 19 homolog 4-like [Benincasa hispida])

HSP 1 Score: 126.7 bits (317), Expect = 8.8e-26
Identity = 67/78 (85.90%), Postives = 69/78 (88.46%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPV NESKTV  EPS+KEKLEEK  D+TLSE DVQLSSIPD NQEEKT
Sbjct: 143 MAPDPLLSFLCNAPVSNESKTVPAEPSSKEKLEEKDADNTLSEGDVQLSSIPDTNQEEKT 202

Query: 61  RRCDFVRDLVFSVI-GDD 78
           RRCDFVR LVFSVI GDD
Sbjct: 203 RRCDFVRGLVFSVILGDD 220

[Close]
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_022143934.1 (protein DEHYDRATION-INDUCED 19-like [Momordica charantia])

HSP 1 Score: 124.8 bits (312), Expect = 3.3e-25
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAP+INESKT QP PS+KE LEEK +DDT SERDVQLSSIPD  +EEKT
Sbjct: 145 MAPDPLLSFLCNAPIINESKTAQPMPSSKENLEEKELDDTFSERDVQLSSIPDTKREEKT 204

Query: 61  RRCDFVRDLVFS-VIGD 77
           RRCDFVR LVFS ++GD
Sbjct: 205 RRCDFVRGLVFSAILGD 221

[Close]
BLAST of CsaV3_7G029650 vs. ExPASy TrEMBL
Match: A0A1S3BR26 (protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103492783 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.6e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPVINESKTVQPEPS+KEK+EEKVVDDTLSERDVQLSSIPD NQEEKT
Sbjct: 140 MAPDPLLSFLCNAPVINESKTVQPEPSSKEKMEEKVVDDTLSERDVQLSSIPDTNQEEKT 199

Query: 61  RRCDFVRDLVFSV-IGDD 78
           RRCDF+RDLVFSV +GDD
Sbjct: 200 RRCDFIRDLVFSVMLGDD 217

[Close]
BLAST of CsaV3_7G029650 vs. ExPASy TrEMBL
Match: A0A0A0K9D8 (Di19_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405880 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.3e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
          MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT
Sbjct: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60

Query: 61 RRCDF 66
          RRCDF
Sbjct: 61 RRCDF 65

[Close]
BLAST of CsaV3_7G029650 vs. ExPASy TrEMBL
Match: A0A6J1CQT3 (protein DEHYDRATION-INDUCED 19-like OS=Momordica charantia OX=3673 GN=LOC111013723 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-25
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAP+INESKT QP PS+KE LEEK +DDT SERDVQLSSIPD  +EEKT
Sbjct: 145 MAPDPLLSFLCNAPIINESKTAQPMPSSKENLEEKELDDTFSERDVQLSSIPDTKREEKT 204

Query: 61  RRCDFVRDLVFS-VIGD 77
           RRCDFVR LVFS ++GD
Sbjct: 205 RRCDFVRGLVFSAILGD 221

[Close]
BLAST of CsaV3_7G029650 vs. ExPASy TrEMBL
Match: A0A6J1JVL0 (protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111487954 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-25
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPV+NESKTVQP PS+KEKL+E  VDDTLSERD+ LSS+PD  QEEKT
Sbjct: 142 MAPDPLLSFLCNAPVVNESKTVQPVPSSKEKLKESDVDDTLSERDIHLSSLPDTKQEEKT 201

Query: 61  RRCDFVRDLVFSVI-GDD 78
           RRCDFV+ LV SVI G+D
Sbjct: 202 RRCDFVQGLVLSVIVGED 219

[Close]
BLAST of CsaV3_7G029650 vs. ExPASy TrEMBL
Match: A0A6J1GPT9 (protein DEHYDRATION-INDUCED 19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456391 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.2e-24
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 0 

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPV NESKTVQP PS+KEKL+E   DDTL ERDV LSS+PD  QEEKT
Sbjct: 142 MAPDPLLSFLCNAPVANESKTVQPMPSSKEKLKESDADDTLFERDVHLSSLPDTKQEEKT 201

Query: 61  RRCDFVRDLVFSVI-GDD 78
           RRCDFV+ LV SVI GDD
Sbjct: 202 RRCDFVQGLVLSVILGDD 219

[Close]
BLAST of CsaV3_7G029650 vs. TAIR 10
Match: AT1G02750.1 (Drought-responsive family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04
Identity = 22/75 (29.33%), Postives = 44/75 (58.67%), Query Frame = 0 

Query: 4   DPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKTRRC 63
           D  LSF+ N+ + N++K V P+ S ++K    + D + ++       + D ++ EK ++C
Sbjct: 144 DQFLSFINNSALPNQTKLVLPDSSVEDK--NPIKDSSAAKEGTSSCPLSDSDKLEKAKKC 203

Query: 64  DFVRDLVFSVIGDDK 79
           +FV+ L+ S + DD+
Sbjct: 204 EFVQGLLSSAMFDDE 216

[Close]
BLAST of CsaV3_7G029650 vs. TAIR 10
Match: AT1G02750.2 (Drought-responsive family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04
Identity = 22/75 (29.33%), Postives = 44/75 (58.67%), Query Frame = 0 

Query: 4   DPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKTRRC 63
           D  LSF+ N+ + N++K V P+ S ++K    + D + ++       + D ++ EK ++C
Sbjct: 128 DQFLSFINNSALPNQTKLVLPDSSVEDK--NPIKDSSAAKEGTSSCPLSDSDKLEKAKKC 187

Query: 64  DFVRDLVFSVIGDDK 79
           +FV+ L+ S + DD+
Sbjct: 188 EFVQGLLSSAMFDDE 200

The following BLAST results are available for this feature:
BLAST of CsaV3_7G029650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646355.16.1e-35100.00hypothetical protein Csa_015805 [Cucumis sativus][more]
XP_004136009.14.8e-3296.15protein DEHYDRATION-INDUCED 19 homolog 4 [Cucumis sativus][more]
XP_008451522.15.3e-3192.31PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucumis melo][more]
XP_038900025.18.8e-2685.90protein DEHYDRATION-INDUCED 19 homolog 4-like [Benincasa hispida][more]
XP_022143934.13.3e-2580.52protein DEHYDRATION-INDUCED 19-like [Momordica charantia][more]
BLAST of CsaV3_7G029650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G029650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BR262.6e-3192.31protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A0A0K9D82.3e-27100.00Di19_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405880 PE=4... [more]
A0A6J1CQT31.6e-2580.52protein DEHYDRATION-INDUCED 19-like OS=Momordica charantia OX=3673 GN=LOC1110137... [more]
A0A6J1JVL04.7e-2579.49protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1GPT95.2e-2479.49protein DEHYDRATION-INDUCED 19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
BLAST of CsaV3_7G029650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G02750.12.0e-0429.33Drought-responsive family protein [more]
AT1G02750.22.0e-0429.33Drought-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027935Protein dehydration-induced 19, C-terminalPFAMPF14571Di19_Ccoord: 1..74
e-value: 2.1E-18
score: 66.8
NoneNo IPR availablePANTHERPTHR31875:SF25DROUGHT-INDUCED PROTEINcoord: 1..77
IPR033347Protein DEHYDRATION-INDUCED 19PANTHERPTHR31875PROTEIN DEHYDRATION-INDUCED 19coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G029650.1CsaV3_7G029650.1mRNA