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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCAGAACACAGCTGCACCGTCACCGATAGCCCAAAACCCACAATTTCCGACCAAGGAGAATATGACGTCGGCACCCGCACCGGCGCCGGCGGCCACCAGTAGTGACAATGCTTCGGGTCATCCTATTCATCACAGCCATTCTATTAATTCAAACAATCACTGTTGCAAAAGTGATGGAAATTCCGACGCCGGCAATTTTTCCGACCACCGTAGCTGGCCGGACAAGGTTCACATAAACGAGGCGGCATCCGTAAATCCGCCAGTGGCTCTGCCACTCCACAACCGAATGCTTATGCGACCGCCGATGCCCTCATTGCGACCCCCACCGCCACCGCAATATGGAGATCATATGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTGGAATGTCGGAGCCATGGTCGTCACCGTCACACCCACCGCCGCCGCATAGCTATTATCGGTGGCCGGAACCCGTACCTTACTATTTGCAAGAGCAACAGCCACCGGTGGGGAATACGCCGAACCACTACGTATTCAACGACGAGAATACTGAAGGAT mRNA sequence ATGCAGAACACAGCTGCACCGTCACCGATAGCCCAAAACCCACAATTTCCGACCAAGGAGAATATGACGTCGGCACCCGCACCGGCGCCGGCGGCCACCAGTAGTGACAATGCTTCGGGTCATCCTATTCATCACAGCCATTCTATTAATTCAAACAATCACTGTTGCAAAAGTGATGGAAATTCCGACGCCGGCAATTTTTCCGACCACCGTAGCTGGCCGGACAAGGTTCACATAAACGAGGCGGCATCCGTAAATCCGCCAGTGGCTCTGCCACTCCACAACCGAATGCTTATGCGACCGCCGATGCCCTCATTGCGACCCCCACCGCCACCGCAATATGGAGATCATATGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTGGAATGTCGGAGCCATGGTCGTCACCGTCACACCCACCGCCGCCGCATAGCTATTATCGGTGGCCGGAACCCGTACCTTACTATTTGCAAGAGCAACAGCCACCGGTGGGGAATACGCCGAACCACTACGTATTCAACGACGAGAATACTGAAGGAT Coding sequence (CDS) ATGCAGAACACAGCTGCACCGTCACCGATAGCCCAAAACCCACAATTTCCGACCAAGGAGAATATGACGTCGGCACCCGCACCGGCGCCGGCGGCCACCAGTAGTGACAATGCTTCGGGTCATCCTATTCATCACAGCCATTCTATTAATTCAAACAATCACTGTTGCAAAAGTGATGGAAATTCCGACGCCGGCAATTTTTCCGACCACCGTAGCTGGCCGGACAAGGTTCACATAAACGAGGCGGCATCCGTAAATCCGCCAGTGGCTCTGCCACTCCACAACCGAATGCTTATGCGACCGCCGATGCCCTCATTGCGACCCCCACCGCCACCGCAATATGGAGATCATATGGGTTTTCGTGGAAGTCATGGTTTTTGGCCTGGAATGTCGGAGCCATGGTCGTCACCGTCACACCCACCGCCGCCGCATAGCTATTATCGGTGGCCGGAACCCGTACCTTACTATTTGCAAGAGCAACAGCCACCGGTGGGGAATACGCCGAACCACTACGTATTCAACGACGAGAATACTGAAGGAT Protein sequence MQNTAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDGNSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSSPSHPPPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEGX
Homology
BLAST of CsaV3_7G028560 vs. NCBI nr
Match: KGN45423.2 (hypothetical protein Csa_015802, partial [Cucumis sativus]) HSP 1 Score: 379.8 bits (974), Expect = 1.3e-101 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query: 1 MQNTAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDG 60
MQNTAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDG
Sbjct: 1 MQNTAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDG 60
Query: 61 NSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGF 120
NSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGF
Sbjct: 61 NSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGF 120
Query: 121 RGSHGFWPGMSEPWSSPSHPPPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG 180
RGSHGFWPGMSEPWSSPSHPPPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG
Sbjct: 121 RGSHGFWPGMSEPWSSPSHPPPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG 180
BLAST of CsaV3_7G028560 vs. NCBI nr
Match: KAA0057596.1 (hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa]) HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68 Identity = 142/189 (75.13%), Postives = 152/189 (80.42%), Query Frame = 0
Query: 4 TAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSD---- 63
T +PI QNPQFPT+ENMTSAP A +SDNASGH + + +SINSNNHCCKS+
Sbjct: 56 TPTATPIGQNPQFPTRENMTSAP-----AATSDNASGHHVRNKNSINSNNHCCKSERTTH 115
Query: 64 -GNSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHM 123
GNSDAGNFSDHRS DKVHINEAA+VNPPV LPL NRM MRPPM S R PPPPQYGD M
Sbjct: 116 YGNSDAGNFSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGD-M 175
Query: 124 GFRGSHGFWPGMSEPWSSPSHPP-------PPHSYYRWPEPVPYYLQEQQPPVGNTPNHY 181
FRGSHGFWPGMSEPWSS S PP PPHSYYRWPEPVPYYLQEQQPPVGNTP+HY
Sbjct: 176 SFRGSHGFWPGMSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHY 235
BLAST of CsaV3_7G028560 vs. NCBI nr
Match: TYK20998.1 (hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 246.1 bits (627), Expect = 2.3e-61 Identity = 130/171 (76.02%), Postives = 138/171 (80.70%), Query Frame = 0
Query: 22 MTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSD-----GNSDAGNFSDHRSWPDK 81
MTSAP A +SDNASGH + + +SINSNNHCCKS+ GNSDAGNFSDHRS DK
Sbjct: 1 MTSAP-----AATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDK 60
Query: 82 VHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSS 141
VHINEAA+VNPPV LPL NRM MRPPM S R PPPPQYGD M FRGSHGFWPGMSEPWSS
Sbjct: 61 VHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGD-MSFRGSHGFWPGMSEPWSS 120
Query: 142 PSHPP-------PPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG 181
S PP PPHSYYRWPEPVPYYLQEQQPPVGNTP+HY+FNDENTEG
Sbjct: 121 ASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEG 165
BLAST of CsaV3_7G028560 vs. NCBI nr
Match: KAG6593135.1 (hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.2 bits (191), Expect = 8.2e-11 Identity = 65/166 (39.16%), Postives = 80/166 (48.19%), Query Frame = 0
Query: 27 APAPAATSSDNASGHPIHHSHSINSNNHCCKSDGNSDAGNFSDHRSWPDKVHINEAASVN 86
APAPAA+++ S HP + S S+ HC K D + S KVH NEAA
Sbjct: 52 APAPAASAAVRDSVHP--NIPSAASDPHCNKIDWTQNCVPGS------SKVHFNEAAGAV 111
Query: 87 PPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSSPSHP------ 146
PPV +P +R+ +R P Q+G +G S GF M EP P P
Sbjct: 112 PPVDVPYRHRLSLR---------PGSQFGG-VGHDASRGFGRPMMEPLPQPLPPAMPPAM 171
Query: 147 ----PPPHSYYRWPEPVPYYLQEQQPP---VGNTPNHYVFNDENTE 180
PP YYRW EP PYY Q+Q PP V P HY+FNDEN +
Sbjct: 172 PPAMPPGDGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVD 199
BLAST of CsaV3_7G028560 vs. ExPASy TrEMBL
Match: A0A0A0K5U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 6.4e-102 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query: 1 MQNTAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDG 60
MQNTAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDG
Sbjct: 48 MQNTAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDG 107
Query: 61 NSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGF 120
NSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGF
Sbjct: 108 NSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGF 167
Query: 121 RGSHGFWPGMSEPWSSPSHPPPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG 180
RGSHGFWPGMSEPWSSPSHPPPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG
Sbjct: 168 RGSHGFWPGMSEPWSSPSHPPPPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG 227
BLAST of CsaV3_7G028560 vs. ExPASy TrEMBL
Match: A0A5A7UTY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00730 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 7.1e-69 Identity = 142/189 (75.13%), Postives = 152/189 (80.42%), Query Frame = 0
Query: 4 TAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSD---- 63
T +PI QNPQFPT+ENMTSAP A +SDNASGH + + +SINSNNHCCKS+
Sbjct: 56 TPTATPIGQNPQFPTRENMTSAP-----AATSDNASGHHVRNKNSINSNNHCCKSERTTH 115
Query: 64 -GNSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHM 123
GNSDAGNFSDHRS DKVHINEAA+VNPPV LPL NRM MRPPM S R PPPPQYGD M
Sbjct: 116 YGNSDAGNFSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGD-M 175
Query: 124 GFRGSHGFWPGMSEPWSSPSHPP-------PPHSYYRWPEPVPYYLQEQQPPVGNTPNHY 181
FRGSHGFWPGMSEPWSS S PP PPHSYYRWPEPVPYYLQEQQPPVGNTP+HY
Sbjct: 176 SFRGSHGFWPGMSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHY 235
BLAST of CsaV3_7G028560 vs. ExPASy TrEMBL
Match: A0A5D3DBX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00250 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 1.1e-61 Identity = 130/171 (76.02%), Postives = 138/171 (80.70%), Query Frame = 0
Query: 22 MTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSD-----GNSDAGNFSDHRSWPDK 81
MTSAP A +SDNASGH + + +SINSNNHCCKS+ GNSDAGNFSDHRS DK
Sbjct: 1 MTSAP-----AATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDK 60
Query: 82 VHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSS 141
VHINEAA+VNPPV LPL NRM MRPPM S R PPPPQYGD M FRGSHGFWPGMSEPWSS
Sbjct: 61 VHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGD-MSFRGSHGFWPGMSEPWSS 120
Query: 142 PSHPP-------PPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDENTEG 181
S PP PPHSYYRWPEPVPYYLQEQQPPVGNTP+HY+FNDENTEG
Sbjct: 121 ASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEG 165
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN45423.2 | 1.3e-101 | 100.00 | hypothetical protein Csa_015802, partial [Cucumis sativus] | [more] |
| KAA0057596.1 | 1.5e-68 | 75.13 | hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa] | [more] |
| TYK20998.1 | 2.3e-61 | 76.02 | hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa] | [more] |
| KAG6593135.1 | 8.2e-11 | 39.16 | hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K5U2 | 6.4e-102 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1 | [more] |
| A0A5A7UTY4 | 7.1e-69 | 75.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3DBX5 | 1.1e-61 | 76.02 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 160..180 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 158..180 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..57 |
Relationships
The following mRNA feature(s) are a part of this gene:
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