CsaV3_7G028360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G028360
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr7: 17871892 .. 17872781 (-)
RNA-Seq ExpressionCsaV3_7G028360
SyntenyCsaV3_7G028360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCCTTCTTCTCTTCCTTTCAAAACCCGTCTCACTTTTCATTCTTCCCGCTCAATCTCGCCCTCAACATCCTCCATTCATTCCGACCACTTTCAACATCAAGCTCACCCGGAAAACCCAAATGGAATTCACTTTCCAACGTCTTCATTTCCAACCCAACTCTTCTAATCCTTCAATCATGCTCTTCCATGTTCCAATTAAAGCAAATTCAAGCCCATATTACTTGTACTGGCCTCATGAACCAAATCTTCCCTGCCAGCCGCCTCCTAGCCTTTTGTGCGCTCTCCGATTCCGGTGACATTCACTATGCACATCTCATCTTCGATCAAACTGAGCTCCCCAATTGCTTTTTCTGGAATACGATGATCAAGGGTTATTGCAAAGCTAATCACCCTTCAATGGGGTTCTCATTTTTCCGGCAAATGATTCGGAATCGCGCTGAATTTGATTCTGGAAGCTTTGTTTTTGCTCTCAAGGCTTGCGGTCAATTTGCGGAGAAAATTGTGGGAATGGCCGTGCATTCTGTTATTTGGAAACGGGGGTTTGATTCTGACTTATTTGTACAAAATGGATTGATCCAAAACTATGTTGAAACTGGGTGTCTTGGTTTTGCACGCCAAATGTTTGATGAAAGTTCTGTTAAGGATGTTGTTACATGGACGACGATGATCAATGGGTACGCAAGGAACAATTGGTTGGATGAGGCTATAGCATTATTCAATTCGATGTTGTCGAGTGATGTCAAGCCGAATGAGGTTACTATGATCGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTCTGAAATGGGGAAGACTCTTCATGAACATATAAGAAGAAAGGACATAACCTGTAGTCTTAATTTGCTCAATGCAATGTTGGATAT

mRNA sequence

ATGAAACCCTTCTTCTCTTCCTTTCAAAACCCGTCTCACTTTTCATTCTTCCCGCTCAATCTCGCCCTCAACATCCTCCATTCATTCCGACCACTTTCAACATCAAGCTCACCCGGAAAACCCAAATGGAATTCACTTTCCAACGTCTTCATTTCCAACCCAACTCTTCTAATCCTTCAATCATGCTCTTCCATGTTCCAATTAAAGCAAATTCAAGCCCATATTACTTGTACTGGCCTCATGAACCAAATCTTCCCTGCCAGCCGCCTCCTAGCCTTTTGTGCGCTCTCCGATTCCGGTGACATTCACTATGCACATCTCATCTTCGATCAAACTGAGCTCCCCAATTGCTTTTTCTGGAATACGATGATCAAGGGTTATTGCAAAGCTAATCACCCTTCAATGGGGTTCTCATTTTTCCGGCAAATGATTCGGAATCGCGCTGAATTTGATTCTGGAAGCTTTGTTTTTGCTCTCAAGGCTTGCGGTCAATTTGCGGAGAAAATTGTGGGAATGGCCGTGCATTCTGTTATTTGGAAACGGGGGTTTGATTCTGACTTATTTGTACAAAATGGATTGATCCAAAACTATGTTGAAACTGGGTGTCTTGGTTTTGCACGCCAAATGTTTGATGAAAGTTCTGTTAAGGATGTTGTTACATGGACGACGATGATCAATGGGTACGCAAGGAACAATTGGTTGGATGAGGCTATAGCATTATTCAATTCGATGTTGTCGAGTGATGTCAAGCCGAATGAGGTTACTATGATCGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTCTGAAATGGGGAAGACTCTTCATGAACATATAAGAAGAAAGGACATAACCTGTAGTCTTAATTTGCTCAATGCAATGTTGGATAT

Coding sequence (CDS)

ATGAAACCCTTCTTCTCTTCCTTTCAAAACCCGTCTCACTTTTCATTCTTCCCGCTCAATCTCGCCCTCAACATCCTCCATTCATTCCGACCACTTTCAACATCAAGCTCACCCGGAAAACCCAAATGGAATTCACTTTCCAACGTCTTCATTTCCAACCCAACTCTTCTAATCCTTCAATCATGCTCTTCCATGTTCCAATTAAAGCAAATTCAAGCCCATATTACTTGTACTGGCCTCATGAACCAAATCTTCCCTGCCAGCCGCCTCCTAGCCTTTTGTGCGCTCTCCGATTCCGGTGACATTCACTATGCACATCTCATCTTCGATCAAACTGAGCTCCCCAATTGCTTTTTCTGGAATACGATGATCAAGGGTTATTGCAAAGCTAATCACCCTTCAATGGGGTTCTCATTTTTCCGGCAAATGATTCGGAATCGCGCTGAATTTGATTCTGGAAGCTTTGTTTTTGCTCTCAAGGCTTGCGGTCAATTTGCGGAGAAAATTGTGGGAATGGCCGTGCATTCTGTTATTTGGAAACGGGGGTTTGATTCTGACTTATTTGTACAAAATGGATTGATCCAAAACTATGTTGAAACTGGGTGTCTTGGTTTTGCACGCCAAATGTTTGATGAAAGTTCTGTTAAGGATGTTGTTACATGGACGACGATGATCAATGGGTACGCAAGGAACAATTGGTTGGATGAGGCTATAGCATTATTCAATTCGATGTTGTCGAGTGATGTCAAGCCGAATGAGGTTACTATGATCGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTCTGAAATGGGGAAGACTCTTCATGAACATATAAGAAGAAAGGACATAACCTGTAGTCTTAATTTGCTCAATGCAATGTTGGATAT

Protein sequence

MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDX
Homology
BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_004148898.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sativus])

HSP 1 Score: 607.4 bits (1565), Expect = 6.4e-170
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW
Sbjct: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
           RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 296

BLAST of CsaV3_7G028360 vs. NCBI nr
Match: KAE8646321.1 (hypothetical protein Csa_016774, partial [Cucumis sativus])

HSP 1 Score: 607.4 bits (1565), Expect = 6.4e-170
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW
Sbjct: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
           RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 296

BLAST of CsaV3_7G028360 vs. NCBI nr
Match: KAA0057547.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18268.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 560.8 bits (1444), Expect = 6.9e-156
Identity = 272/296 (91.89%), Postives = 285/296 (96.28%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSS QNPSH S FPLNLA+ ILHSFRPLSTSSS GKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSIQNPSHISIFPLNLAVKILHSFRPLSTSSSAGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAH+TCTGLM+QIFPASRLLAFCALSDSGDIHYAHLIFDQTE PNCFFW
Sbjct: 61  SCSSMFQLKQIQAHMTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+AN+PSMGFSFFRQMIRNRAEFD GSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCQANYPSMGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GFDS+LFV+NGLIQNYVETGCLGFARQ+FDESS+KDVVTWTTMINGYA++NWLDEAIAL
Sbjct: 181 LGFDSELFVRNGLIQNYVETGCLGFARQVFDESSIKDVVTWTTMINGYAKSNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDV+PNEVTMIALLSACSQKGDS MGKTLHEHIR K ITCS+NLLNAMLD
Sbjct: 241 FNSMLSSDVEPNEVTMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLD 296

BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_008451419.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucumis melo])

HSP 1 Score: 558.5 bits (1438), Expect = 3.4e-155
Identity = 271/296 (91.55%), Postives = 284/296 (95.95%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSS QNPSH S FPLNLA+ ILHSFRPLSTSSS GKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSIQNPSHISIFPLNLAVKILHSFRPLSTSSSAGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAH+TCTGLM+QIFPASRLLAFCALSDSGDIHYAHLIFDQTE PNCFFW
Sbjct: 61  SCSSMFQLKQIQAHMTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+AN+PS+GFSFFRQMIRNRAEFD GSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCQANYPSLGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GFDS+L V+NGLIQNYVETGCLGFARQ+FDESS+KDVVTWTTMINGYAR+NWLDEAIAL
Sbjct: 181 LGFDSELLVRNGLIQNYVETGCLGFARQVFDESSIKDVVTWTTMINGYARSNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDV+PNEVTMIALLSACSQKGDS MGKTLHEHIR K ITCS+NLLNAMLD
Sbjct: 241 FNSMLSSDVEPNEVTMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLD 296

BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_038898970.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 525.8 bits (1353), Expect = 2.4e-145
Identity = 257/296 (86.82%), Postives = 268/296 (90.54%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFF S QNPSHFS FPLNLA  ILHSFR LS+S+S GKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFCSIQNPSHFSIFPLNLAFKILHSFRQLSSSTSAGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSM QLKQIQAH+T TGLMNQIFPASRLLAFCALSDSGDIHYAHL+F Q E PNCFFW
Sbjct: 61  SCSSMLQLKQIQAHMTRTGLMNQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+ANHPSMGFSFFRQMIRNR + D GSFVFALKAC QFA KIVG AVHSVIWK
Sbjct: 121 NTMIKGYCRANHPSMGFSFFRQMIRNRVQLDCGSFVFALKACAQFAGKIVGTAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GFDS+L VQNGLIQNYVE GCLGFARQ+FDESSVKDVVTWTTMINGY RNNWLDEAI L
Sbjct: 181 LGFDSELLVQNGLIQNYVEIGCLGFARQVFDESSVKDVVTWTTMINGYTRNNWLDEAITL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDV+PNEVTMIALLSA SQKGDS MG+ LHEHIRRK ITCS+NLLN MLD
Sbjct: 241 FNSMLSSDVEPNEVTMIALLSASSQKGDSVMGRVLHEHIRRKGITCSVNLLNTMLD 296

BLAST of CsaV3_7G028360 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42
Identity = 100/287 (34.84%), Postives = 156/287 (54.36%), Query Frame = 0

Query: 18  PLNLALN-ILHSFRPLSTSSSP---GKP-KWNSLSNVFISNPTLLILQSCSSMFQLKQIQ 77
           PL   LN  L+S     T S P    KP  WNS  +  + NP L +L+ C  +  LKQIQ
Sbjct: 14  PLTPKLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQ 73

Query: 78  AHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANH 137
           A +   GL+   F +SRL+AFCALS+S  + Y+  I    E PN F WN  I+G+ ++ +
Sbjct: 74  AQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESEN 133

Query: 138 PSMGFSFFRQMIRN---RAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFV 197
           P   F  ++QM+R+    +  D  ++    K C       +G  +   + K   +    V
Sbjct: 134 PKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHV 193

Query: 198 QNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDV 257
            N  I  +   G +  AR++FDES V+D+V+W  +INGY +    ++AI ++  M S  V
Sbjct: 194 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 253

Query: 258 KPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           KP++VTMI L+S+CS  GD   GK  +E+++   +  ++ L+NA++D
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300

BLAST of CsaV3_7G028360 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39
Identity = 91/262 (34.73%), Postives = 141/262 (53.82%), Query Frame = 0

Query: 36  SSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCA 95
           S+P +P  N+  +  IS     +++ C S+ QLKQ   H+  TG  +  + AS+L A  A
Sbjct: 19  SNPNQPTTNNERSRHIS-----LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAA 78

Query: 96  LSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMI-RNRAEFDSGS 155
           LS    + YA  +FD+   PN F WNT+I+ Y     P +    F  M+  ++   +  +
Sbjct: 79  LSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 138

Query: 156 FVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESS 215
           F F +KA  + +   +G ++H +  K    SD+FV N LI  Y   G L  A ++F    
Sbjct: 139 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 198

Query: 216 VKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKT 275
            KDVV+W +MING+ +    D+A+ LF  M S DVK + VTM+ +LSAC++  + E G+ 
Sbjct: 199 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 258

Query: 276 LHEHIRRKDITCSLNLLNAMLD 297
           +  +I    +  +L L NAMLD
Sbjct: 259 VCSYIEENRVNVNLTLANAMLD 275

BLAST of CsaV3_7G028360 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-38
Identity = 96/293 (32.76%), Postives = 152/293 (51.88%), Query Frame = 0

Query: 38  PGKPKWNSLS-NVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCAL 97
           P  P   SLS N ++     LI   CS+M +LKQI A +  TGL++    ASR+LAFC  
Sbjct: 14  PAMPSSGSLSGNTYLR----LIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCA 73

Query: 98  SDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFV 157
           S S D++YA+L+F +    N F WNT+I+G+ +++ P M  S F  M+ +          
Sbjct: 74  SPS-DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 133

Query: 158 F--ALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCL----------- 217
           +    KA G+  +   G  +H ++ K G + D F++N ++  YV  GCL           
Sbjct: 134 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 193

Query: 218 ------------GFAR--------QMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNS 277
                       GFA+         +FDE   ++ V+W +MI+G+ RN    +A+ +F  
Sbjct: 194 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 253

Query: 278 MLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           M   DVKP+  TM++LL+AC+  G SE G+ +HE+I R     +  ++ A++D
Sbjct: 254 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301

BLAST of CsaV3_7G028360 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-38
Identity = 95/287 (33.10%), Postives = 151/287 (52.61%), Query Frame = 0

Query: 46  LSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGD---- 105
           L+ +   +P L +LQSCSS   LK I   +  T L++ +F ASRLLA C    + +    
Sbjct: 6   LNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTN 65

Query: 106 -IHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALK 165
            + YA+ IF Q + PN F +N +I+ +     PS  F F+ QM+++R   D+ +F F +K
Sbjct: 66  LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125

Query: 166 ACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGC----------LGF----- 225
           A  +    +VG   HS I + GF +D++V+N L+  Y   G           +GF     
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185

Query: 226 ----------------ARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDV 285
                           AR+MFDE   +++ TW+ MINGYA+NN  ++AI LF  M    V
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245

Query: 286 KPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
             NE  M++++S+C+  G  E G+  +E++ +  +T +L L  A++D
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVD 292

BLAST of CsaV3_7G028360 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.7e-37
Identity = 90/276 (32.61%), Postives = 155/276 (56.16%), Query Frame = 0

Query: 24  NILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQ 83
           N+LH    +  +++  KP   + S    + P+   L++C ++ +LK     +T  GL N 
Sbjct: 6   NVLHLSPMVLATTTTTKPSLLNQSKCTKATPS--SLKNCKTIDELKMFHRSLTKQGLDND 65

Query: 84  IFPASRLLA-FCALSDSGDIHYAHLIFDQTE-LPNCFFWNTMIKGYCKANHPSMGFSFFR 143
           +   ++L+A  C L     + +A  +F+ +E    CF +N++I+GY  +   +     F 
Sbjct: 66  VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFL 125

Query: 144 QMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETG 203
           +M+ +    D  +F F L AC +   K  G+ +H +I K G+  DLFVQN L+  Y E G
Sbjct: 126 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 185

Query: 204 CLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSML-SSDVKPNEVTMIALL 263
            L  AR++FDE S ++VV+WT+MI GYAR ++  +A+ LF  M+   +V PN VTM+ ++
Sbjct: 186 ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 245

Query: 264 SACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           SAC++  D E G+ ++  IR   I  +  +++A++D
Sbjct: 246 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279

BLAST of CsaV3_7G028360 vs. ExPASy TrEMBL
Match: A0A0A0K8Z0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390210 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.1e-170
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW
Sbjct: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
           RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 296

BLAST of CsaV3_7G028360 vs. ExPASy TrEMBL
Match: A0A5A7USA2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002100 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.3e-156
Identity = 272/296 (91.89%), Postives = 285/296 (96.28%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSS QNPSH S FPLNLA+ ILHSFRPLSTSSS GKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSIQNPSHISIFPLNLAVKILHSFRPLSTSSSAGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAH+TCTGLM+QIFPASRLLAFCALSDSGDIHYAHLIFDQTE PNCFFW
Sbjct: 61  SCSSMFQLKQIQAHMTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+AN+PSMGFSFFRQMIRNRAEFD GSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCQANYPSMGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GFDS+LFV+NGLIQNYVETGCLGFARQ+FDESS+KDVVTWTTMINGYA++NWLDEAIAL
Sbjct: 181 LGFDSELFVRNGLIQNYVETGCLGFARQVFDESSIKDVVTWTTMINGYAKSNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDV+PNEVTMIALLSACSQKGDS MGKTLHEHIR K ITCS+NLLNAMLD
Sbjct: 241 FNSMLSSDVEPNEVTMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLD 296

BLAST of CsaV3_7G028360 vs. ExPASy TrEMBL
Match: A0A1S3BSJ4 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492719 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.6e-155
Identity = 271/296 (91.55%), Postives = 284/296 (95.95%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSS QNPSH S FPLNLA+ ILHSFRPLSTSSS GKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSIQNPSHISIFPLNLAVKILHSFRPLSTSSSAGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAH+TCTGLM+QIFPASRLLAFCALSDSGDIHYAHLIFDQTE PNCFFW
Sbjct: 61  SCSSMFQLKQIQAHMTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+AN+PS+GFSFFRQMIRNRAEFD GSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCQANYPSLGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GFDS+L V+NGLIQNYVETGCLGFARQ+FDESS+KDVVTWTTMINGYAR+NWLDEAIAL
Sbjct: 181 LGFDSELLVRNGLIQNYVETGCLGFARQVFDESSIKDVVTWTTMINGYARSNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDV+PNEVTMIALLSACSQKGDS MGKTLHEHIR K ITCS+NLLNAMLD
Sbjct: 241 FNSMLSSDVEPNEVTMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLD 296

BLAST of CsaV3_7G028360 vs. ExPASy TrEMBL
Match: A0A6J1HB35 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111461192 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.5e-129
Identity = 229/296 (77.36%), Postives = 254/296 (85.81%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKP FSS QNPS FS FP  L   ILHSFRPLS+S++ GKPKWNSL+NVFI+NPTLLILQ
Sbjct: 1   MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMF LKQIQAH+TCTGLMNQIFPASR++AFCALSD+GDIHYAHL+F Q E PNCF W
Sbjct: 61  SCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+A  PSMGF FFRQMIRNR E D GSFV ALK CGQFA K V MAVHSV+WK
Sbjct: 121 NTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFAGKAVRMAVHSVVWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GF S+L VQNGLIQ YVE GC+GFARQ+FDESSVKDVVTWTTMINGY  NN LDEAI L
Sbjct: 181 LGFGSELLVQNGLIQYYVEIGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIML 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           F+ M SS+V+PNEVTMIALLSACSQKGD  MG++LHE I+RK+I+ S+NL+N MLD
Sbjct: 241 FDLMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD 296

BLAST of CsaV3_7G028360 vs. ExPASy TrEMBL
Match: A0A6J1KS94 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111497776 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.7e-128
Identity = 227/296 (76.69%), Postives = 254/296 (85.81%), Query Frame = 0

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKP FSS QN S FS FP  L   ILHSFRPLS+S++ GKPKWNSL+NVFI+NPTLLILQ
Sbjct: 1   MKPLFSSVQNSSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMF LKQIQAH+ CTGLMNQIFPASR++AFCALSD+GDIHYAHL+F Q E PNCF W
Sbjct: 61  SCSSMFHLKQIQAHMICTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+A  PSMGF FFRQMIRNR E D GSFV ALKACG FA K + MAVHSV+WK
Sbjct: 121 NTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKACGHFAGKAIRMAVHSVVWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GF S L VQNGLIQ YVETGC+GFARQ+FDESSVKDVVTWTTMINGY  NN+LDEA+ L
Sbjct: 181 LGFGSGLLVQNGLIQFYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNYLDEAVML 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           F+ MLSS+V+PNEVTMIALLSACSQKGD  MG++LHE I+RK+I+ S+NL+N MLD
Sbjct: 241 FDLMLSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD 296

BLAST of CsaV3_7G028360 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 174.9 bits (442), Expect = 9.9e-44
Identity = 100/287 (34.84%), Postives = 156/287 (54.36%), Query Frame = 0

Query: 18  PLNLALN-ILHSFRPLSTSSSP---GKP-KWNSLSNVFISNPTLLILQSCSSMFQLKQIQ 77
           PL   LN  L+S     T S P    KP  WNS  +  + NP L +L+ C  +  LKQIQ
Sbjct: 14  PLTPKLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQ 73

Query: 78  AHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANH 137
           A +   GL+   F +SRL+AFCALS+S  + Y+  I    E PN F WN  I+G+ ++ +
Sbjct: 74  AQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESEN 133

Query: 138 PSMGFSFFRQMIRN---RAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFV 197
           P   F  ++QM+R+    +  D  ++    K C       +G  +   + K   +    V
Sbjct: 134 PKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHV 193

Query: 198 QNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDV 257
            N  I  +   G +  AR++FDES V+D+V+W  +INGY +    ++AI ++  M S  V
Sbjct: 194 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 253

Query: 258 KPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           KP++VTMI L+S+CS  GD   GK  +E+++   +  ++ L+NA++D
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300

BLAST of CsaV3_7G028360 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-40
Identity = 91/262 (34.73%), Postives = 141/262 (53.82%), Query Frame = 0

Query: 36  SSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCA 95
           S+P +P  N+  +  IS     +++ C S+ QLKQ   H+  TG  +  + AS+L A  A
Sbjct: 19  SNPNQPTTNNERSRHIS-----LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAA 78

Query: 96  LSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMI-RNRAEFDSGS 155
           LS    + YA  +FD+   PN F WNT+I+ Y     P +    F  M+  ++   +  +
Sbjct: 79  LSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 138

Query: 156 FVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESS 215
           F F +KA  + +   +G ++H +  K    SD+FV N LI  Y   G L  A ++F    
Sbjct: 139 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 198

Query: 216 VKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKT 275
            KDVV+W +MING+ +    D+A+ LF  M S DVK + VTM+ +LSAC++  + E G+ 
Sbjct: 199 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 258

Query: 276 LHEHIRRKDITCSLNLLNAMLD 297
           +  +I    +  +L L NAMLD
Sbjct: 259 VCSYIEENRVNVNLTLANAMLD 275

BLAST of CsaV3_7G028360 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 96/293 (32.76%), Postives = 152/293 (51.88%), Query Frame = 0

Query: 38  PGKPKWNSLS-NVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCAL 97
           P  P   SLS N ++     LI   CS+M +LKQI A +  TGL++    ASR+LAFC  
Sbjct: 14  PAMPSSGSLSGNTYLR----LIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCA 73

Query: 98  SDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFV 157
           S S D++YA+L+F +    N F WNT+I+G+ +++ P M  S F  M+ +          
Sbjct: 74  SPS-DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 133

Query: 158 F--ALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCL----------- 217
           +    KA G+  +   G  +H ++ K G + D F++N ++  YV  GCL           
Sbjct: 134 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 193

Query: 218 ------------GFAR--------QMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNS 277
                       GFA+         +FDE   ++ V+W +MI+G+ RN    +A+ +F  
Sbjct: 194 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 253

Query: 278 MLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           M   DVKP+  TM++LL+AC+  G SE G+ +HE+I R     +  ++ A++D
Sbjct: 254 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301

BLAST of CsaV3_7G028360 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-39
Identity = 95/287 (33.10%), Postives = 151/287 (52.61%), Query Frame = 0

Query: 46  LSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGD---- 105
           L+ +   +P L +LQSCSS   LK I   +  T L++ +F ASRLLA C    + +    
Sbjct: 6   LNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTN 65

Query: 106 -IHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALK 165
            + YA+ IF Q + PN F +N +I+ +     PS  F F+ QM+++R   D+ +F F +K
Sbjct: 66  LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125

Query: 166 ACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGC----------LGF----- 225
           A  +    +VG   HS I + GF +D++V+N L+  Y   G           +GF     
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185

Query: 226 ----------------ARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDV 285
                           AR+MFDE   +++ TW+ MINGYA+NN  ++AI LF  M    V
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245

Query: 286 KPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
             NE  M++++S+C+  G  E G+  +E++ +  +T +L L  A++D
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVD 292

BLAST of CsaV3_7G028360 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-38
Identity = 90/276 (32.61%), Postives = 155/276 (56.16%), Query Frame = 0

Query: 24  NILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQ 83
           N+LH    +  +++  KP   + S    + P+   L++C ++ +LK     +T  GL N 
Sbjct: 6   NVLHLSPMVLATTTTTKPSLLNQSKCTKATPS--SLKNCKTIDELKMFHRSLTKQGLDND 65

Query: 84  IFPASRLLA-FCALSDSGDIHYAHLIFDQTE-LPNCFFWNTMIKGYCKANHPSMGFSFFR 143
           +   ++L+A  C L     + +A  +F+ +E    CF +N++I+GY  +   +     F 
Sbjct: 66  VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFL 125

Query: 144 QMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETG 203
           +M+ +    D  +F F L AC +   K  G+ +H +I K G+  DLFVQN L+  Y E G
Sbjct: 126 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 185

Query: 204 CLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSML-SSDVKPNEVTMIALL 263
            L  AR++FDE S ++VV+WT+MI GYAR ++  +A+ LF  M+   +V PN VTM+ ++
Sbjct: 186 ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 245

Query: 264 SACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           SAC++  D E G+ ++  IR   I  +  +++A++D
Sbjct: 246 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004148898.16.4e-170100.00pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sa... [more]
KAE8646321.16.4e-170100.00hypothetical protein Csa_016774, partial [Cucumis sativus][more]
KAA0057547.16.9e-15691.89pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18268... [more]
XP_008451419.13.4e-15591.55PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g... [more]
XP_038898970.12.4e-14586.82pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Benin... [more]
Match NameE-valueIdentityDescription
Q9SJZ31.4e-4234.84Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
O823801.4e-3934.73Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9SJG62.7e-3832.76Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
Q9FG163.5e-3833.10Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Q9LUJ26.7e-3732.61Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0K8Z03.1e-170100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390210 PE=4 SV=1[more]
A0A5A7USA23.3e-15691.89Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BSJ41.6e-15591.55LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mito... [more]
A0A6J1HB354.5e-12977.36pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... [more]
A0A6J1KS941.7e-12876.69pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
AT2G22410.19.9e-4434.84SLOW GROWTH 1 [more]
AT2G29760.11.0e-4034.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G42920.11.9e-3932.76Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G06540.12.5e-3933.10Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22690.14.7e-3832.61CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 288..296
NoneNo IPR availablePANTHERPTHR47925:SF92PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 194..296
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 39..244
coord: 194..296
NoneNo IPR availablePANTHERPTHR47925:SF92PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 39..244
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 169..283
e-value: 8.2E-23
score: 82.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 20..168
e-value: 4.1E-10
score: 41.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 219..253
e-value: 3.9E-11
score: 40.4
coord: 120..147
e-value: 4.1E-7
score: 27.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 216..263
e-value: 2.0E-13
score: 50.3
coord: 115..162
e-value: 2.6E-8
score: 34.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..251
score: 13.230347
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 10.117337

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G028360.1CsaV3_7G028360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding