CsaV3_7G027140 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G027140
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPoly(A)-specific ribonuclease PARN-like
Locationchr7: 16762405 .. 16776821 (+)
RNA-Seq ExpressionCsaV3_7G027140
SyntenyCsaV3_7G027140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAACTTTTAATTAATAACATCAATCACTTTCTTTTCTTCAATGCTTAAAATATTTAAATAAACATTTTCTAAAAAGAAAAAATATATATATTAAATGAATAATTTGTGCCCTCGACTCATGATTTTTTCACTAACTATATTTAAATCACTTTGATTTAAAAATGGCTATTTCTAAATTCCACTCCAGGGGGACAATTTACCAAAAAAGGTACCCCTAAATAGATATAATTGATCTTCCAACTATTACAGAAGTTCCAAAGTTCTTCAATTCACCTCAGATATCACAATCACTATAACACTAATTAAGACTTCAAAACATAACTTCAAGGTGTATACAAATGTCACATCTTCAATTACAAAATCATAAACAGACTCAGACAACATATCTGTAAGTTACATATCTTCCTGCAGTTTCACTTGGTCTGATGATCTTCACAACTTGGCCACGCTTTAGCCCGTAATATCGTGCAACCGGGTCAGTCACTTGTATGCGCGGTAGCTAACACCAAATATGCAAAATCATATAAGAATCCCTTTCATATTGCAACAGAAACAGAAACACAGACACTAACGAATAGACGTAGACAAGAGGAGACGGTGTGGCCTGACATATGCCTCTAGACTGCATTGTGATAAGTGAAGTAATAGTGATGATATCTAATGATTCATGCCCACTTTATTTTAACAAAGATGTCAATTTGTGACCAAGGAAAATCATCCTTGGGACTGGCTTTGTTGAGGTCATAAAAGCCAACGCACACGACTCTACCGTCGTTTTACAGGACAAGAAATATGGAATGTCCGGGGAAGTGGATAGAGATCAAACTTTTGGCTCCTGGTTTGTTTTTATGTTTCTTTGTGGACTTCGATTTTGAAGCCTCTTTAATACAAAGACATTATTTTGCATAGTTGGAAGCTTTTTTTTTGTAAAGGGAGCTCCCTACTTGTGAGTTTTTTTTGTATGCTAGTGTATTCTTTCATTTCTATGTCTAATTTGGGAATCAAACTAGTATCAGGAATTCATGAGCATAACCTATTCCCACATATATATGTGTATATATATATATATGTTATATTTTCTTAAGAAATATCCAACATAGATCTTAAGATAAGTCTCACAAATTTTGTACTTTCTTAAGAATTAATGCCAACCTGTGTTTCTTTCACGGTATATCTCTCAAGTAGTGTCTTTTTCTCTTCATTGTTAAGTAACTGGTGCTCAGGAACAAGGACGTGATCTTTGATATTAACTAGCAATTCTGCTTCCTGCATCAACAGATGGAGATAAGAAAAAGAATAAAAATTGTATATTTCAAGTGAACTAAGAAAAGAGCAAGAATATTGTAGAAACCAAGCCCTACCTTAACCCTTTAATTGTTCTTCAACCAGAGAATCCAAGAAACCCCCCATATTTTTCATTCTCATTTTGCAAAACAAGGAATAACCAAACTAAGTATAAGATGATTTCCAGTTTCCAGAGTAAGAGGGTTTCCTTTGATTCTCCTCAAATTAGTGGTGCACAAAACGAATCTAATTTACTTCTCTAACTTGTGGTGGTTTGGTTTTTCTCAAACTTAAATCATAAAAATACTCCATAAAATATTTTCACCTGGAAAACTTCCAAGTGGAATGATTTGGAAGTTGCTTCACTCATACAGGCACGGGCGAAAGGGGTCAAATTCTGTTGGACGACCAATATTGCTCTAAAAACGTTCTCCGATTTCATTCGGGTGGTATATGTTTTCAACGGCTTGATGCCAACCTTTGCCTCTTCTGGAAAAAAAACATATATCTATACAGGAAAAAACAAAATCACTACAAGAGGATGTAAACAAATAAGAGAATTACCGAGAAACTTGCAGTTCTTGTAACTTAACTTTAATAACTATGAGAAATACTAATTAAATATTCCCTTTCTGAGACAATACCTGATCACTGCTATCATTTCTCTTGGATTTATTAATAACAATGTCTTCTCTTTTCATGTTTTCACCATATTTTTGCTTAAATTGCTCCCTTGTCATGTCAATCTCAAAGTCTCCAACAAAATAGCCTCGGTCTCTTAGCATTTGAAACACAGTTTTTCGAATTCTGAAAAGCCTGGTGATTTCCTCTTCTGATAGCACCATCTTGTTGCTGGCTAACTCATTGTCAAACAATTCAGTTCTCATTCACTAAATAGGTACACAAGGAATATATAATGCACATTCTAAATGAGTACGAGTAAGTTAATGTAACATCAATCTGAATAGCTATGTTACGTGCAGGAAATCTCAAAATCAATATAAGACACAACATACAGAACACACCACAGATATAATAAAGCAATCATTTTCAGAAATTCAAAACAAGTTGGAGACACTAACATGATGAACGCAACAGCAATATATAATATGAATATGGAGACCGATTTAAAGAAAAAAATAAAATCCTGCTGGAAAAGCACAGACCTGCAACAACAGTTTTCAAACATGTGTACATAACATATAGACATCCTTCTGTTACTATTATTGTCGTTTCAAACAACTATAGGTGTTTGGCTCAACGAATGTACACCTCAACCCGCCATACAAGTCAACAGCTTAGTCATGGTGATTTTGCATTAAAAAAAAATTAAAAGAAATTTTAATACCCTTAGTTGACCTTCCTGATTTGAACTTTATCCTTCTTTTTCTATGTTCATGAGTTTTCAGGTCAAGTAGTGCACGCTTAGACTATTCTAATAGGTAAACATCCTGACCCTGTTAGATTCAGTTGTCAAGAACACTCATTAAACCTAATTATACCACAAAATTCTAAGAGGGTTCCATAAATGAGCTGATAGAAAGCCTATGACTGAAGTATGAACAAATCTTGGAGACACCCAGATTAAGTAAAATATTTAAGAGAGACTGGATCAAACTGAAGCAGCAAACGTAAATTTCATTCGTCTATGAAATCTGTTCCTTGTAAAAAACAAATAAATAAGTGAAGCTGCAAACAGGGATTGGAAAAACAAGTGCAGCCTTTCTTCCAAGTCCTTTCTACAAAAAACACACTAGCTGGGAATCAACGGAACAGAGGTCATTCGTTTCTGCAGTCTCCAACATGCCTTCGCCTACCTCTAGGCCCTTTACTAAGATACAAGAATTATTCTTTTAACCACTTAACCAACATTTTTGACACAAAAACTATTCTCTAAAGAAAACATAACTTCGCACAGTGTTGGCGGTCACTTATTTGGGATTTAATATCGACAGGTTTCCTTCACACCAAAAGTCCTCCCGTGTTGAAATTAGTTGAGCTGGATATAAGCTGGTCCAGAAACTTCCATACAATTTTATTTTTTAAAAAAAAAGGAAATTTTCATTTGAGGAGATGAAGGCCTTAAGGATTATTAAACTATAAAACTTCTAGCTATACCACTACCACCACCTAAGTAATTGGTGGAAAGTAAGTTGGTAGCTTGTAGTTAACTAAAAAGGAAGTTCAAAAGCAACGATTGGTTCATTGTTTGACGATGGGTATTGCTTCTTTCTTTCCTTAGACAAATCCAAAATGGAGTTTTCCAATATATAAATAAAGACATAGATGAAGATTGAGAGAATTACCAGTAACAACAAGAAATCAGTGAAACCCACTAAGTAGAAGACGGCGGAGGCACTGAGCTGGGCTTGAAGACGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAAGAAGAAGGTGGAACGAGAAATTAGGGCTTAGTCTGATTTTATTAGACATAGTTGGCGGCGGGTAAGAGAAAACATGAAATCCATTTAAATTTTGTCTTTTAATTAAATTCCTTAAAATATGGATTTTTTTTCATTTTTATTTCTTACATTTTTTTTCAATCCCCTAATTTTCGTTTTGTGTTTTTTCTATAAATTTCATATTTTAAATTTGTTTTCCAATGTTAGTTTATTGTTATTTTTTTAGAAACATTTTCTACTCTAAAACTATTTACATATGAAAATTCTAACTTTAATATTAATGGAAAGTGTACCTACTAAAATTGTACGATTCTTTTAAAGAATGGTGTTTCCGTGAACTTTCTAGAAATAATGAATTTGTGTTGATGTTGATTATGAAGTGATGTGATTTGTTCTCTTGTATTTGATTATCTGGTTCTATTGATATGAGAAAGTGAAGCATGTGATGTTTTTTAAGTTTATTTGAGCGTCTTATGGTTCTTAGGATAATTTTTTATGATTTTGTGGACGGTTGCAAATCCAAGAAAAAAATAGATGTAGTAGACAAGATTTGCATTATTTAATATATATTGTAATCTAACACCCCAAAATTAATATTAAAATAAAAAAATCGAATGTGAGGAGGCACGTGCCCTGGTCCCTTAATAAATGTGCCCTTGATTGTGGAGTAGAAATTCAATCTCTCCATACATCAAACTCATGGACCCTACCATATGAATTTGGTCATATTTAACTTCGAATAATTGTAAGGGATAGTTTCAAATGTAGCAATTAGATTCAAAATGATGAAGGATATAACGATATTTTAATTTTTTTTTTTTTTTTTTTGCAAATACTATTATTAATAGACATTGTTGCAAATATTGGTTAATCATGTATAGACCATAAGAGTATGCCACAAATAAATTTTGCTATTTTTGCATACTTAATTGTTATTCATAAAAGTGTTACCGATCATAATTATGTAAATAAAATGTTATTGTTTACATATTGTTGATGCCAGTTTTTGGATAGAAATAAGTGCACTTGACTGTCATGTGACACCAACAATAGATTTGTTTGAAGAGGAGAAAAACATGGTTATAAAAGAGAAAACGTGCACATACTGGATGTCTAAGTTTTCTCGTGAACTGTGTGTGAGAGCTAAAGAGATTTTGAGAGTAGGACTCAACTTAGCTCTATTTAAGTTACAATGATAAAACCTATAGAAAAAGTTGACATGGATGATTTGTAAGCTTTTTTTAGTCACTTTACGATATTGAAATAACCTAAGAGCTAAGGAATGGCTTTGACTTCGTGTTTGGCTAGGGTCGAGTTGAGGTCGAGCATTCTATTAGGTCAAATGATGTTTGGGCTCGGGCATGCATAAAATTAAAGTATGTCATGTTGGTCAATTTCCAATGGTCGGCCTCAAGCACTAGCTTGAGCCTCGTTAATTTTTTTTAGCTTCATTTCAGTTTTCAATTGTCACATTAGACCTGTCATTTATTTTTGTTTTGTTATTTGTAAATGTCAATTACATCCTTTAGTCCAATCTAACACATGCAATCAACACAACCATGATACAATAAATGAATGGGTGTAATGTAACAAATATATGGATATATACATGAATCAACAAAACCCAATTCATTTTAAGTTTATGTTTACTTTTATTGATTCTATTGCATAGGGCTAACTAAGGTTGATCAAATAGTTTGGCATAATCATAACTTAATATTCAAACAAAATATAACAAAATCTATCAAATTATATCAATGCATTTCAATTAGTTTGGTATACACAAAAGGTTCTCCTCTTTGATCCCTCGTTTTCATAAGAACCAAATGCAGATGACAATATATATAATACACTCTTGATAGGAGAGTCTTGGTAAAGCTTGGCATACAAAGGCAGCTCGCAACTCATTTCGCCACTTCCCCCATGAATTTTGAATGAGAGCTTAAACGGCAAAGCTATGGCGTCTCGGTTCTCATATTTCCAGCTGCACAGACGCCTCTATACAACCACCAGCCAATGGAGTGTCAGGCAAGTTCGCAATTCCAACTTCCTTGGCTCCTTGGAGGATCTGAAGAACGACATCTCCGATTCCGACTTCATCGCACTTTCTCTTCAGAGAACGGGTTCTTCTTCTTTCCCTTGGCACCGCCTTCAGCCCTTCGACACTCACGATACCGCTTATTGCAAGGCCAAGTACGCCGCCGAGAAGTTTCAGATTATTCAGTTTTCTCTCTGCCCTTTCTCTGTTAGGGATTCCAAACTAATCGCCCATCCGTAAGTTCCCCCGGGCCGCCGCTTATCTTCATGTTTGGATGTTTGGAGTTTTGTGCTCTTGGGCAGGATTTGGGAATTGAGTGTTTCTTTATTTTGATGAATATTTCTCCGCACTTGCAATGGATTTTGTTTCTTTCACTGGAATTTAAAGTAGGGGTGAGGAGTATATTCTTTAGTGTTCATAGATGAGTATGATTTATAATGGAAAGTTCGATGCTTTCTGGCTGATATTTTATTATGGTTTTTGCTCATGGTCTGTCCGTTCATCATCATTTTAAAGTCTAAATAGGAATTCTCTTTTGTTATTTGATGATTGATACAAATTTGATTGATCAAAATATGTTTCATTCAATGTGTAGGTACAACTTTCATTTGTTCCCCAGAGATGAATTGAACATTGGGATGCCTTCTTACAGTTTTTCATGTCAAGTTTCACATCTAACATCCATGGCTCGTGAAGGTTTTGACTTTGGTGCTTGGGTATATGATGGTAAGCCTAATTGTAGACAATTTACTTCTGTTTCACTCTCACTAATAGAGGAGAAATTCTAAAACCCAGATTTCCAATCCCTAAACCACCTTCCTTCCAAGGTTTCAGCAAGAGCAGAGGTTGAATTTGAGAGGCATTCTTTAGAAAGAAAACAGTCTCTTTGACCCTTGAAATTCTGTTCCCATTATCAAGCTAAAGAGAATAACTTCGGTTCTTAAGTCTTCTAAAATGAAAATAAGATTTCTCACGATTACGTTCACTAATCCACTCTATCTTGGACTATGTCTTGTTCATCTCTTCTATTCGAATAAGAATCTCAGAATCCGCCTTCAATCTGATTAACTCTTCCCATACTACACTCAAAATCCTCACAGACTCCAAGTCATGTAAAATGTTTATCTTATTAATTATCTGCTATTTTTTAGTTAAAGAACCTTTGAAGACCCTCAGGTTCCAGCCTCTAGGCTTGAACTTTAGAGACTCCAATTTTATTGTAAACCTAAGTGCCTCCCATCTCCCAACCATATCAGCTGACCATTAGTCGAGCTAGGAGGACTTGAAAAAAGGATGCTTTATTCACACACTCCAAATATGAAACGACAAGGTCCCTATCTTATATCTGAGAACTTACCAAACAACCTGTTGTTGGTCAGATTCAACTATGGGACTCCAGTGGCTTGATATCCTCCAAGAAATTTTTTTCTGCCCTTTCAGAGCAAAAACGTATCTACCTGGCAAGAAATGGGATTAGAGTACACAAATTGGATAAAGTAATCTGACATCATGAGGGGAGGATAAAATAGACTATACTCTTCAAGATACTTTTGTAAGATTGCATCAGTCTAGAAAATTTCCAACCACAGACCAGCTAGATTCACTATCACAATTGCTGAAGTTGCCACTCAACTCTTCCTACAAATCATCTTGTTTTGAGATTCATATGGCTCATGTAGCAGTAGTACATTTGAACGCCAATCTTCTGAATTTTAGTTGGATCTGCTTGTTTCAAGTAATTTTTATCAACCTAAATATTATTTATCACTTTCTAGTTGTTTTATCTCTTGATTTTTGGGAAAAAGTAAACCTTTGTTTGATCTTTATACTGAATCTATGAAGTATCTTCTATATTGCAGTTTGACTTCTAATGGTCTTTTTCCGTTTTCTTTTTTGGTTCCAGGCATATCATATTTATCTAGAGCTCAAGAGTCTATAGCAAAAACTCAAATGGGCTCTCAAACTCTGCCACCTAATATTAACGCTGTGAAACCTTCTTCTGAACTGTCAGTTGCTGATACCATTTTTGTTCAACGGGTTAAATCACGTGTAAAGAACTGGAAAGATGCATATGATTCAAGCTCAAAAACAAGTGGTAATTTACAACTCAGTATTGCTTTCTAAAACAATTTCATCATATTCTTTTCTTTCCATTTTGCTCTCGCATTTTTTAAACTGTGTAGGTTAAAAAACACTTTTGGTTCTTGAACGTTTTTATTAAAGTAACAATTTTTCCTCTAAACTCTAGTTTGAAATGAATCTGATGATTTAATCTCTATACTTTCAAACTTGTTAAATTAAATGAGATTTATTAACTATGCATATAAATAAATTGATTGGGACCAAATATGTTTTTAAACTACAAAGAAAAGAGATTTTGATGAGATTTTCATAGTAGGGATTAAATTGTTACAAGTTTGAAAGTAAAAGGATTGAATTGTTATATAGAAAAATTCAAGGACTAAGTTATTGCAAATTTAAAAGAACATGGGTGAAATTGTTACAAAATTAAAGTTCAAACAAAATTCTTACTCGTATGGAGGTTGAAGGACTAAAGTGTTTTTTAACCTGTTTTATTTCTTTGTTTCCTGAAATAGTAAAGGTAATGTTTCCATAATATAGACGCATTGCTAAGTACGTTGAAAAAGCTCATAGTCGGTAGTGAGCAGTATGGATCAAGACCATCTATTGTTATAGATGTTTATAGCGAACGGCAAGTTCTACTTGTGTTAGAGGTAACTTGACCTTTTCAAAATATGAGTGGTTTAACATGTGTATTGCATGTTTTTAACTATGCTAAATTATTATGGACATTTTACATCTCCAGAGATATCCCCTTCCAGAGAAAAACCGTTATCTATAATTAAGAATTATATATCTCTGATCTCTCTCTCTATTGTCAATGTTATTATTTTTAGTAACTTTACATTTATGTTATACATTGTTTAAATAAAATAGCTTATCATGCATGTTATACATAATTTAAGGTAAAATTAATGATTTAATACATGGACGTTTATGGTTGTCTATTTAATGACTTGACTTAAATAGTTTCCATTGCATCCACGAACTTTAATTTATGTAATTTTTGCTATTAATACTGGTACCATATAAATATTGACTGATTTGATATAATACGATAGACGACAATTGAAAAAAGTGGATAGTTGGTCATGGTCCAAATTAAGTGACACTTGCAATTATGGCATTTTTGAAGCATTTTTTTTTTCTGTAGACCATGCTGCCATTTTTTGTCAAGCTGTTGCCCTCCCATCTTTTGTTTGCTATGTCATGCTAACTGAACCATGTTTATACAATATAACTACATGGAATTATTGTTCAAAGTTAATTACTACTCTAGTTAGAGTTTAGGGAGTAAATAGATATAAGTTTATAACTGAGTTAAAAGATCTAAATTGATGCAATATCATTATCGATTATGTTCTATGCTTTGTTTTTTTTTTTTTTTTTTTTGAAAAGGAAACAAGTCTCTTTTATTAATGATAATAATGAGACAAAAGCTCAAAGTACAAGAGAGTTATACGATGAGCAAAATAACTTAAGGATCTGTAGTCGCACCCGGGCATCTTGATTATCTTCTATTGACTTGTTTCAGTTAATTAGTTTTTGGGAATAAATCAAATTATACCCCCACATGTGCAAGATTAATCATGTAAAACAAACCTTAAAATGTTCAAAATAAACTCAAATAACATTATTTTAGAAATTGTCACATAATAGAATGGATAGAAATAGCATGTAAATGTGAAGGACAATTACAATACCCAAGTTCTTTAAGAGGTTTGGACTCTCTGAAAGTTAACCTCCAAAATTCTACGTCCTTTCAACTCTTCTTAGCCACTCTATTTATAAACACTATTTACTAACCAACTCCCTTAACTGATAGCAAATAACATGCATGCCCTCTTAATATCCTAAAATTACCCTTAATATTTCCTTGTATTCATAACAAAGATCTCAACCTATAATTCCAATCTTTCATAAATCACTAAAGAAGGCAACACCCAAAGAAACCCATTGGGGGAAGAACTGAGAGAGATGAGGAAACAACGGAAGACAACAAAGAAGGTAGTGTGAGTAAAAACTTACGACTTTGAACTTACTAAATATGACATTAATAGCAAAAAGTTGAACCAAGCAAAAACTATAATATCATTTCTGAAATGACCATCCCTTGTTAATGAAAGTTTTGTTTCTTATCAGGTAAAACCAAGTCTAAAATGACTAAATTTAAGAGTGAATATATGCATTCCAATTTATTCTTAGTGTTATCCCTTTTAGTGTGCAATGATGTCTTTAACTATGTTGCTTTTTCTGCAGAGGGACTATATCCGTATACTTATATTCTTTCCTTTATTTTATGTAGCTGTTGAAGGAATTTTCTGATGACCTGGTTCCTGTAGTAATTTCAGCAAAGGGTGGAGGAACTCAAGCAGTTCGTGCCATTTTGACAAGCTCAAAAGAAGACAAGATTCTGCTTGAGGTACTAGTATATTCACTAGATTTCCACATTCTAAGTTCCTAAACTATTTTCTTAAAAAAAAAAAAAGATCCCTAAACTATTAATTCTTTAACTACCACTTTGTAGAAGTTTATGCACTTCAGCTGATTCTTTCATCATTTTCAACTGGCCTATGCATCTGGATAATAAAAATATGCATGTCTTAATATTATCCTTTTTAAAAAAATAAAATAAATAAAGATGAAGAAATGGTACATGATGGAAATAAGCTTTGAATTTCCAGAAATTGAGAGCATGGATTAACTGAGTAATGCCAAATTTTAAATGGATTTGCTTGAATGCTCCATCCAGCTTTGTAGAACTTATAAATTATTTTGTGTTCCCTTGCAGAAGGAGCTTCAATATCTTGAAGACAAAGAAAACAAGAAATTTCGTGGTTTTCGAGAGGTGATAGATGTGATTTCTGCTTCACAGAAGCCTATTGTCTCCTACAATTCTCTTCACGGTGTTTATCTTGTATATTCTTTATTTTTGGTTAATCTCTTTGCTTTATTTTTTTTGTTCTCTAATGCTTTTGTTTTGGATGCAGATTTTACATTTATTCATTCTAAATTCCTTGCTCCCCTGCCTACTAGCATAGATGAGTACGCATCTTCCTTGCATTCGGTTTTCCCACGAGTGCATGATGTAAAGCATTTGATGAGCAAGATTGGTGGCCTCAGTAAGCCAATGAGTATAGCCGCAGCTTATTCTTACTTGAAAAAACAATACTATGCACCTAGTTACTTGGATATCCCAGTTGAAGGTTTGTCACCTCGTCCTCCCTTCCTGATGCTACGAAAAAAACTTTTTCATTGTGTGTTAGTGTGAGAGAGAGAGAGACATGACCTAAAACTCACTTAAAATGTTTAGTAAATACATGCTGATAATGCTGATATGCCGTAGATGTGGGTCCATTGCCTTTCTCGGTGCTAAGCTAAGTGATTGAAGGACTCAATCAAGCACCGAAGACATTTAATCTCTATTAGATAATAGGTTTTGAAACGTGTATAATAGGTTCTTAAGCTTTCAGTTTAGTTTGTAATAGATTTTTAAACTTTCAATCTTATGACTTCAGTCTTAACAAATTTGAAATTCTAAACAACCAATCGACCTATTAGATAATTTAAATTCTATGTCTAATGGAACCCCAAAATTTCAAAAGGTTAATTGAACAAAAATGATATCAAACTATCAAAGGTTAGAAACTAAATCCCTAATCTTGAAAGTCTAGGGAGGACTGAATTTGTGATTTAGCCTATATTTTTTATGGTTACATTCGTTTCTTCACAGTACACATTATAAGCCTTTTGTTAGGCCTTAGTTTTTGTTTCTCTTTTTTAAATGTCTTTTGTCTTACCAATCAGTGAAAAGAAAGCCTATCCTTGTTTTATCTCTTTTGTTTTACTGTAATTTAATATACACAATCTTTTCTTAATACATTCATTGTTTAGTGAATTATTTGTGTTTTTCACGTATTGAGTATCCACCTAAATCTCACTATTTTGTTTTTCATTAGGCTCCACTGATCATCACCAAGTAGAAATCTTTCATTTCTGCTAGCTAACCTTTTGGGGTTCTATTGCAGCTCCAGGAAATGATCACAAGCCTCATGGGCATAATGCTATACGGTTATGCCATTTGTTTGCACAAGTCTGCTCTGTACTTAAAATTGATCTCAGTGGTGTCCAATCCAACGACAATGAGTGTTTGGCCTCAATGCTCGACGAGTGTTCAAATGTTTCTTCATTCTCCCCTTACCACTGCAAACCCAAGGACGAGGATGTTAAGATCTGGGCACAGGGTGTTAGAAAAGTAAGTTGTAGGCATTTGGTTTTCTTGTGGGGATTAAGAGAAGGGCTGACTGCTCGGTTGCTAAAAGCTTCACTAGAAGGAACCCATGAAGTTTTCTGTGAAGAGTTTGATGTTCGATTTGTGGACAAGAAATGTGCCATTGTCGTTTTCTCGCAGCCAGACCTATCCGAGACCTTCCTTGATGCAATAAATAGTGACAACATTGTTGGATCTTTAAGAGAGATGGTATCAGAAGGGCTAAGAGCTGCAGGTTATGAAACTTACAAGAAAATCTGTAGCTTTGATTTATGGGAAGCAGATTTAGCTGAGTCCCTGGAGAGGGCCATTTTGGAAGCCGATCCCGAAACTGCTCAGTTAGACATCAATTACTCTAATGATTCTTTCATTTATTTGAATGATCTTTGAAAGACATGATTAGGTCACCAAAATTCATATAAGCTTAGGGAATACTGGAGTTAGATTCTTCCTGCTTTCTAATTGATGATATTTGGCATCCATGATAAACTTTCGAAAGTTTTGGTTCATTCCTTACAGCAGCAAGTCTTAAAAGTTTATGATGATTTAATACTTTTCTTTCCATTATTTTGTACATACTGTTGGGCCATTTTAGGGCTCTTGCTTGTTATTCTAAACAGCTTAGATCACCAAATTCATGACTCAGGTGAGAGATGATTTCAAGTTGTGTGAAGATATCATTTTGGTAATTTGCACAGGCACAAATATTTGATAATGTTGTTCATTTTAAAAGCTTCATTTACATATCTTCTAAAAAAAATGGCAACCCATTTAGTTTTTCTTATTCAAAGTTAAATATATTTCATTCACTCAAATTTTAAAAACAAAAAGTTGAAATCTTTTTTCAAAGTTCTTAAATTTGACTTTTTTATTAAACAAAATGTTTCGAATAACAATAGTTAAAATTTTAAGTGGTGTAGTCAGTTTTGTATTTACCAATTACCCTAAATTCCACACATTTTATTTTGTTCATCAGATTTCATTCTCCCATGTAGTTTCTTCTTTTTGCTCATGTTTTCATTCTGGGTCTTCACCTTGTCCGATGCATTGTTTTGTTCATTCTTCTTTTGCATGAGTCTCCCTTGTTCTATTTCCAAACTTTCAAAATAAAAAAATTTAGATGGCCTTTAATATTCTTGAAAGAATTATGAATCTACCTAAGGTTTAGAATTCAATTAAGATGTTCAGTTGAAATAGATATCAAAGGCACCAATTAGTTTTTTAAAACAATTGAAGTTTTGTGGGAGACCAACAAGACTTTATCAAACATTTGATGAGTGAGCATTTTTGAGTTGTCATTTGTTTCATACAATTTGATTTTCACCAGAAAAAATTACAATATAATTTGAAGAAAAACAATCACTATAGATCCCAGACAAAATATACACAAGGGTTTTGAAAATTGGAGCTTAAAAAAATTCAAATGGAAGAAATATTCAGAACCTATATGAGATTCAGAGTTGAAAAGTGATTAGATTATGAAAAGGAAAAAGAAATGTAAGCCAACCCAGTGCCAATAATGACCATCAAACAAGAAAGATCATCCCGGCGAGTTAGTCGGAAGAATCAATTTCATTTCGCAAACGAAGAAATTGCCACAAAACATTAGGTTGATTAATATCAGTTCTGGGACAGAGTGCGTTTGCTTCATTCACAAAAAAAAAAAAAAAAAAAAAAAACAGAAGAGAATGTGGAAACATCGAAAATGTACCAGCAATAAAAGGGCCTGAGAATCCAAAAGCAAGAATCTCAGACGAGTGATGCTGGAGAATTTTTATATTGCAAGGTTTTGAGTAAAATTTTGGCTGGATCGATGAACCGATTCCAGTCAAGAAGCTGAACTTGCTTTTTCGATTTGGATATTTCCACTGCGAAATTAAATCTCCCATAAGTTGAGACTTAATAAGATCAAGGTAGAAGAAAAAACATAATCAACGAGCATAAAAAAAAGACTTGGAAAAATTTTTGAAATGGAGGGGAGGCTGAAGAAACAACTATTGAGCGATGAGGTTACGATGGATTTGTTATATATATACATAAAGATGAATGGAAGCTGAATTAGGGCTTTGTGAGCGTCCGTACATAGAATCAATCTATTGGGGGTATTCTAGTAATTTTGTTTCATTTTCTAACGTTTTGGTAACGGTGTGAATTGTTGACGGAACTTCTTCTATTACAAATATTTGTTTAACTAAATATTCAAAATCGACTTCAAACCATCCACCGTGAAGGAGTAGAAATCGACCTTTGATGATCAATTTTAAAGTTTTTTTCAAAACTAATACTAATCTGATTCTTCTTAT

mRNA sequence

ATGGCGTCTCGGTTCTCATATTTCCAGCTGCACAGACGCCTCTATACAACCACCAGCCAATGGAGTGTCAGGCAAGTTCGCAATTCCAACTTCCTTGGCTCCTTGGAGGATCTGAAGAACGACATCTCCGATTCCGACTTCATCGCACTTTCTCTTCAGAGAACGGGTTCTTCTTCTTTCCCTTGGCACCGCCTTCAGCCCTTCGACACTCACGATACCGCTTATTGCAAGGCCAAGTACGCCGCCGAGAAGTTTCAGATTATTCAGTTTTCTCTCTGCCCTTTCTCTGTTAGGGATTCCAAACTAATCGCCCATCCGTACAACTTTCATTTGTTCCCCAGAGATGAATTGAACATTGGGATGCCTTCTTACAGTTTTTCATGTCAAGTTTCACATCTAACATCCATGGCTCGTGAAGGTTTTGACTTTGGTGCTTGGGTATATGATGGCATATCATATTTATCTAGAGCTCAAGAGTCTATAGCAAAAACTCAAATGGGCTCTCAAACTCTGCCACCTAATATTAACGCTGTGAAACCTTCTTCTGAACTGTCAGTTGCTGATACCATTTTTGTTCAACGGGTTAAATCACGTGTAAAGAACTGGAAAGATGCATATGATTCAAGCTCAAAAACAAGTGACGCATTGCTAAGTACGTTGAAAAAGCTCATAGTCGGTAGTGAGCAGTATGGATCAAGACCATCTATTGTTATAGATGTTTATAGCGAACGGCAAGTTCTACTTGTGTTAGAGCTGTTGAAGGAATTTTCTGATGACCTGGTTCCTGTAGTAATTTCAGCAAAGGGTGGAGGAACTCAAGCAGTTCGTGCCATTTTGACAAGCTCAAAAGAAGACAAGATTCTGCTTGAGAAGGAGCTTCAATATCTTGAAGACAAAGAAAACAAGAAATTTCGTGGTTTTCGAGAGGTGATAGATGTGATTTCTGCTTCACAGAAGCCTATTGTCTCCTACAATTCTCTTCACGATTTTACATTTATTCATTCTAAATTCCTTGCTCCCCTGCCTACTAGCATAGATGAGTACGCATCTTCCTTGCATTCGGTTTTCCCACGAGTGCATGATGTAAAGCATTTGATGAGCAAGATTGGTGGCCTCAGTAAGCCAATGAGTATAGCCGCAGCTTATTCTTACTTGAAAAAACAATACTATGCACCTAGTTACTTGGATATCCCAGTTGAAGCTCCAGGAAATGATCACAAGCCTCATGGGCATAATGCTATACGGTTATGCCATTTGTTTGCACAAGTCTGCTCTGTACTTAAAATTGATCTCAGTGGTGTCCAATCCAACGACAATGAGTGTTTGGCCTCAATGCTCGACGAGTGTTCAAATGTTTCTTCATTCTCCCCTTACCACTGCAAACCCAAGGACGAGGATGTTAAGATCTGGGCACAGGGTGTTAGAAAAGTAAGTTGTAGGCATTTGGTTTTCTTGTGGGGATTAAGAGAAGGGCTGACTGCTCGGTTGCTAAAAGCTTCACTAGAAGGAACCCATGAAGTTTTCTGTGAAGAGTTTGATGTTCGATTTGTGGACAAGAAATGTGCCATTGTCGTTTTCTCGCAGCCAGACCTATCCGAGACCTTCCTTGATGCAATAAATAGTGACAACATTGTTGGATCTTTAAGAGAGATGGTATCAGAAGGGCTAAGAGCTGCAGGTTATGAAACTTACAAGAAAATCTGTAGCTTTGATTTATGGGAAGCAGATTTAGCTGAGTCCCTGGAGAGGGCCATTTTGGAAGCCGATCCCGAAACTGCTCAGTTAGACATCAATTACTCTAATGATTCTTTCATTTATTTGAATGATCTTTGA

Coding sequence (CDS)

ATGGCGTCTCGGTTCTCATATTTCCAGCTGCACAGACGCCTCTATACAACCACCAGCCAATGGAGTGTCAGGCAAGTTCGCAATTCCAACTTCCTTGGCTCCTTGGAGGATCTGAAGAACGACATCTCCGATTCCGACTTCATCGCACTTTCTCTTCAGAGAACGGGTTCTTCTTCTTTCCCTTGGCACCGCCTTCAGCCCTTCGACACTCACGATACCGCTTATTGCAAGGCCAAGTACGCCGCCGAGAAGTTTCAGATTATTCAGTTTTCTCTCTGCCCTTTCTCTGTTAGGGATTCCAAACTAATCGCCCATCCGTACAACTTTCATTTGTTCCCCAGAGATGAATTGAACATTGGGATGCCTTCTTACAGTTTTTCATGTCAAGTTTCACATCTAACATCCATGGCTCGTGAAGGTTTTGACTTTGGTGCTTGGGTATATGATGGCATATCATATTTATCTAGAGCTCAAGAGTCTATAGCAAAAACTCAAATGGGCTCTCAAACTCTGCCACCTAATATTAACGCTGTGAAACCTTCTTCTGAACTGTCAGTTGCTGATACCATTTTTGTTCAACGGGTTAAATCACGTGTAAAGAACTGGAAAGATGCATATGATTCAAGCTCAAAAACAAGTGACGCATTGCTAAGTACGTTGAAAAAGCTCATAGTCGGTAGTGAGCAGTATGGATCAAGACCATCTATTGTTATAGATGTTTATAGCGAACGGCAAGTTCTACTTGTGTTAGAGCTGTTGAAGGAATTTTCTGATGACCTGGTTCCTGTAGTAATTTCAGCAAAGGGTGGAGGAACTCAAGCAGTTCGTGCCATTTTGACAAGCTCAAAAGAAGACAAGATTCTGCTTGAGAAGGAGCTTCAATATCTTGAAGACAAAGAAAACAAGAAATTTCGTGGTTTTCGAGAGGTGATAGATGTGATTTCTGCTTCACAGAAGCCTATTGTCTCCTACAATTCTCTTCACGATTTTACATTTATTCATTCTAAATTCCTTGCTCCCCTGCCTACTAGCATAGATGAGTACGCATCTTCCTTGCATTCGGTTTTCCCACGAGTGCATGATGTAAAGCATTTGATGAGCAAGATTGGTGGCCTCAGTAAGCCAATGAGTATAGCCGCAGCTTATTCTTACTTGAAAAAACAATACTATGCACCTAGTTACTTGGATATCCCAGTTGAAGCTCCAGGAAATGATCACAAGCCTCATGGGCATAATGCTATACGGTTATGCCATTTGTTTGCACAAGTCTGCTCTGTACTTAAAATTGATCTCAGTGGTGTCCAATCCAACGACAATGAGTGTTTGGCCTCAATGCTCGACGAGTGTTCAAATGTTTCTTCATTCTCCCCTTACCACTGCAAACCCAAGGACGAGGATGTTAAGATCTGGGCACAGGGTGTTAGAAAAGTAAGTTGTAGGCATTTGGTTTTCTTGTGGGGATTAAGAGAAGGGCTGACTGCTCGGTTGCTAAAAGCTTCACTAGAAGGAACCCATGAAGTTTTCTGTGAAGAGTTTGATGTTCGATTTGTGGACAAGAAATGTGCCATTGTCGTTTTCTCGCAGCCAGACCTATCCGAGACCTTCCTTGATGCAATAAATAGTGACAACATTGTTGGATCTTTAAGAGAGATGGTATCAGAAGGGCTAAGAGCTGCAGGTTATGAAACTTACAAGAAAATCTGTAGCTTTGATTTATGGGAAGCAGATTTAGCTGAGTCCCTGGAGAGGGCCATTTTGGAAGCCGATCCCGAAACTGCTCAGTTAGACATCAATTACTCTAATGATTCTTTCATTTATTTGAATGATCTTTGA

Protein sequence

MASRFSYFQLHRRLYTTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVIDVYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHLFAQVCSVLKIDLSGVQSNDNECLASMLDECSNVSSFSPYHCKPKDEDVKIWAQGVRKVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAINSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDINYSNDSFIYLNDL*
Homology
BLAST of CsaV3_7G027140 vs. NCBI nr
Match: XP_004148964.1 (poly(A)-specific ribonuclease PARN-like [Cucumis sativus] >KAE8646280.1 hypothetical protein Csa_016030 [Cucumis sativus])

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 610/610 (100.00%), Postives = 610/610 (100.00%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSF 60
           MASRFSYFQLHRRLYTTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSF
Sbjct: 1   MASRFSYFQLHRRLYTTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSF 60

Query: 61  PWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIG 120
           PWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIG
Sbjct: 61  PWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIG 120

Query: 121 MPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKP 180
           MPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKP
Sbjct: 121 MPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKP 180

Query: 181 SSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVIDV 240
           SSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVIDV
Sbjct: 181 SSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVIDV 240

Query: 241 YSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKE 300
           YSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKE
Sbjct: 241 YSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKE 300

Query: 301 NKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVH 360
           NKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVH
Sbjct: 301 NKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVH 360

Query: 361 DVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHLF 420
           DVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHLF
Sbjct: 361 DVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHLF 420

Query: 421 AQVCSVLKIDLSGVQSNDNECLASMLDECSNVSSFSPYHCKPKDEDVKIWAQGVRKVSCR 480
           AQVCSVLKIDLSGVQSNDNECLASMLDECSNVSSFSPYHCKPKDEDVKIWAQGVRKVSCR
Sbjct: 421 AQVCSVLKIDLSGVQSNDNECLASMLDECSNVSSFSPYHCKPKDEDVKIWAQGVRKVSCR 480

Query: 481 HLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAIN 540
           HLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAIN
Sbjct: 481 HLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAIN 540

Query: 541 SDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDINYS 600
           SDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDINYS
Sbjct: 541 SDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDINYS 600

Query: 601 NDSFIYLNDL 611
           NDSFIYLNDL
Sbjct: 601 NDSFIYLNDL 610

BLAST of CsaV3_7G027140 vs. NCBI nr
Match: KAA0059619.1 (poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa])

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 543/612 (88.73%), Postives = 574/612 (93.79%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTS-QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTT+ QWS++QVRNSNF G L DLKN ISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCKAKYAAEKFQI+QFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVK 180
           GMPSYSFSCQVSHLTS+AREGFDFGAWVYDGISYLSRAQESIAK QMG QTL PN +AVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 PSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID 240
            SSE SV DTIFVQRVKSRVKNWKDAYDSSSKT+DALLSTLKKLIVG EQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDK 300
           VYSERQ LL LELLKEFSDD+VPVVISAK GGTQA+RAILTSSKEDKILLEKELQ LED+
Sbjct: 241 VYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300

Query: 301 ENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRV 360
           ENKKFRGFREVI++ISASQKPIVSY+SLHDFTFIHSKFLAPLPTSIDE+ASSLH VFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 HDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHL 420
            +VKHLMSKIGGLSKPMSIAAA SYLKK YYAP+YLDIP+EAPGNDHKP GHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVS 480
           FA+VCS+LKIDLSGVQSN+NECLASML++CSNV SSFSPYH +PKDEDVKIWA+ VRK S
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDA 540
           CRHLVFLWG REG+TA LLKASLEG+HEVFCEEF VRFVDKKCAI+VFSQP LSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDIN 600
           INSD IVGSLREMVSEGLRA GYETYK++C FDLWEADLAESLERAI EADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600

Query: 601 YSNDSFIYLNDL 611
           YSND+ I L+DL
Sbjct: 601 YSNDTVISLDDL 612

BLAST of CsaV3_7G027140 vs. NCBI nr
Match: TYK08152.1 (poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa])

HSP 1 Score: 1055.4 bits (2728), Expect = 1.8e-304
Identity = 538/629 (85.53%), Postives = 571/629 (90.78%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTS-QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTT+ QWS++QVRNSNF G L DLKN ISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCKAKYAAEKFQI+QFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYD----GISYL-------------SRAQESIA 180
           GMPSYSFSCQVSHLTS+AREGFDFGAWVYD    G+ +L               AQESIA
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDDSTMGLQWLDILQEFFFCPLRAKTAQESIA 180

Query: 181 KTQMGSQTLPPNINAVKPSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKK 240
           K QMG QTL PN +AVK SSE SV DTIFVQRVKSRVKNWKDAYDSSSKT+DALLSTLKK
Sbjct: 181 KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK 240

Query: 241 LIVGSEQYGSRPSIVIDVYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSS 300
           LIVG EQYGSRPSIVIDVYSERQ LL LELLKEFSDD+VPVVISAK GGTQA+RAILTSS
Sbjct: 241 LIVGIEQYGSRPSIVIDVYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS 300

Query: 301 KEDKILLEKELQYLEDKENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLP 360
           KEDKILLEKELQ LED+ENKKFRGFREVI++ISASQKPIVSY+SLHDFTFIHSKFLAPLP
Sbjct: 301 KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP 360

Query: 361 TSIDEYASSLHSVFPRVHDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAP 420
           TSIDE+ASSLH VFPRV +VKHLMSKIGGLSKPMSIAAA SYLKK YYAP+YLDIP+EAP
Sbjct: 361 TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP 420

Query: 421 GNDHKPHGHNAIRLCHLFAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCK 480
           GNDHKP GHNAIRLCHLFA+VCS+LKIDLSGVQSN+NECLASML++CSNV SSFSPYH +
Sbjct: 421 GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE 480

Query: 481 PKDEDVKIWAQGVRKVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKC 540
           PKDEDVKIWA+ VRK SCRHLVFLWG REG+TA LLKASLEG+HEVFCEEF VRFVDKKC
Sbjct: 481 PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC 540

Query: 541 AIVVFSQPDLSETFLDAINSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESL 600
           AI+VFSQP LSETFLDAINSD IVGSLREMVSEGLRA GYETYK++C FDLWEADLAESL
Sbjct: 541 AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL 600

Query: 601 ERAILEADPETAQLDINYSNDSFIYLNDL 611
           ERAI EADPETAQLDINYSND+ I L+DL
Sbjct: 601 ERAIFEADPETAQLDINYSNDTVISLDDL 629

BLAST of CsaV3_7G027140 vs. NCBI nr
Match: XP_008451634.1 (PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis melo])

HSP 1 Score: 998.8 bits (2581), Expect = 2.0e-287
Identity = 510/612 (83.33%), Postives = 546/612 (89.22%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTS-QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTT+ QWS++QVRNSNF   L DLKN ISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCKAKYAAEKFQI+QFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVK 180
           GMPSYSFSCQVSHLTS+AREGFDFGAWVYDGISYLSRAQESIAK QMG QTL PN +AVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 PSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID 240
            SSE SV DTIFVQRVKSRVKNWKDAYDSSSKT+DALLSTLKKLIVG EQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDK 300
           VYSERQ LL LE+      DL+   I            +  + K   + ++KELQ LED+
Sbjct: 241 VYSERQTLLALEM------DLLECAIQ-----------LCRTCKLFCVPVQKELQNLEDE 300

Query: 301 ENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRV 360
           ENKKFRGFREVI++ISASQKPIVSY+SLHDFTFIHSKFLAPLPTSIDE+ASSLH VFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 HDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHL 420
            +VKHLMSKIGGLSKPMSIAAA SYLKK YYAP+YLDIP+EAPGNDHKP GHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVS 480
           FA+VCS+LKIDLSGVQSN+NECLASML++CSNV SSFSPYH +PKDEDVKIWA+ VRK S
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDA 540
           CRHLVFLWG REG+TA LLKASLEG+HEVFCEEF VRFVDKKCAI+VFSQP LSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDIN 600
           INSD IVGSLREMVSEGLRA GYETYK++C FDLWEADLAESLERAI EADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 595

Query: 601 YSNDSFIYLNDL 611
           YSND+ I L+DL
Sbjct: 601 YSNDTVISLDDL 595

BLAST of CsaV3_7G027140 vs. NCBI nr
Match: XP_038899639.1 (poly(A)-specific ribonuclease PARN-like isoform X2 [Benincasa hispida])

HSP 1 Score: 991.1 bits (2561), Expect = 4.2e-285
Identity = 503/618 (81.39%), Postives = 548/618 (88.67%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSF 60
           MASRFS  QL RRLYTTTSQWSVRQVR+S+F G L +LKN ISDSDFIALSLQ TGSSSF
Sbjct: 1   MASRFSSVQLQRRLYTTTSQWSVRQVRSSDFHGCLGELKNHISDSDFIALSLQNTGSSSF 60

Query: 61  PWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIG 120
           PWHRLQPFDT+DTAYCK KYAAEKFQI+QF+LCPFSVR+SKLIAHPYNFHLFPRDELNIG
Sbjct: 61  PWHRLQPFDTYDTAYCKTKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDELNIG 120

Query: 121 MPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKP 180
           MPSYSFSCQVSHLTSMAREGFDF A +YDGISYLSRAQE IAK +MG  TL  N N  K 
Sbjct: 121 MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQEFIAKVRMGCPTLTSNTNVAKS 180

Query: 181 SSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVIDV 240
           SS+ SVAD+IFVQRVKSRVKNWKDA +SSSK SD LLS L+KLI G EQYGSRPS+ IDV
Sbjct: 181 SSKPSVADSIFVQRVKSRVKNWKDACNSSSKKSDGLLSLLEKLIPGREQYGSRPSMTIDV 240

Query: 241 YSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKE 300
            SERQV+LVLELL EFSDDLVPVVI AK GGT+A+RAILTSSKEDKILLEKELQ LE++E
Sbjct: 241 CSERQVILVLELLMEFSDDLVPVVIPAKSGGTRAIRAILTSSKEDKILLEKELQNLEEEE 300

Query: 301 NKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVH 360
           NKK RGFREVI++ISASQKPI+SY+SL+DFTFIHSKFLAPLPT+IDE+ASSLH VFPRV 
Sbjct: 301 NKKIRGFREVIEMISASQKPIISYSSLNDFTFIHSKFLAPLPTNIDEFASSLHLVFPRVL 360

Query: 361 DVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHLF 420
           DVKHLMSKIGGL+KP SI +A SYLK  YYAP  LDIPVEA GNDHK HGHNAI LCHLF
Sbjct: 361 DVKHLMSKIGGLNKPTSITSALSYLKNHYYAPVDLDIPVEATGNDHKFHGHNAIWLCHLF 420

Query: 421 AQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVSC 480
           A+VCSVLKIDL GVQSN+N+ LASMLDEC+NV SSFSPYH KP+DE++KIWA+   KVSC
Sbjct: 421 AKVCSVLKIDLDGVQSNNNKRLASMLDECANVSSSFSPYHHKPEDENIKIWAKNAIKVSC 480

Query: 481 RHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAI 540
           RHL+FLWG R+G+TARLLK +LEG+HEVFCEEFDVRFVDKKCAIVVF QP LSETFLDAI
Sbjct: 481 RHLIFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDAI 540

Query: 541 NSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERA-------ILEADPET 600
           NSD IVGSLREMVSEGLRAAGYETYK++C  DLWEADLAESLERA       ILEA+PET
Sbjct: 541 NSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLEEHHSILEAEPET 600

Query: 601 AQLDINYSNDSFIYLNDL 611
            +LDINYSNDS IYLNDL
Sbjct: 601 VRLDINYSNDSLIYLNDL 618

BLAST of CsaV3_7G027140 vs. ExPASy Swiss-Prot
Match: Q8W4C3 (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g25430 PE=2 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 8.8e-169
Identity = 316/605 (52.23%), Postives = 432/605 (71.40%), Query Frame = 0

Query: 20  QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFPWHRLQPFDTHDTAYCKAK 79
           +WSV+QV+ SNF  +L++++  I  SDFIALSLQ TGS +  WHR+   DT  T+Y KAK
Sbjct: 23  RWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTSYLKAK 82

Query: 80  YAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMARE 139
           YAAE++QI+QF+LCPFS++ SKL  HPYNFHLFPRDEL  GMPSYSFSCQ S LT+MARE
Sbjct: 83  YAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLTAMARE 142

Query: 140 GFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELSVADTIFVQRVKSRV 199
           GFDF   +Y+GISYLSRAQES +K    +  L  ++     SS  +VADT+FV R++SRV
Sbjct: 143 GFDFNICIYEGISYLSRAQESASKFLSENPILADSVTV--SSSPATVADTVFVGRIRSRV 202

Query: 200 KNWKDA-YDSSSKT-SDALLSTLKKLIVGSEQYGSRPSIVIDVYSERQVLLVLELLKEFS 259
           KNW+ +  DS SKT  D L+S+L++L++GSEQYGSR  + IDV SERQV L+LE+L EFS
Sbjct: 203 KNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILEMLTEFS 262

Query: 260 DDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKENKKFRGFREVIDVISAS 319
           DD+VP+++++K  GTQAVR +  SSKEDK L ++EL+ LE +EN++ RGFREV+D IS+S
Sbjct: 263 DDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDLEKEENRRVRGFREVVDFISSS 322

Query: 320 QKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDVKHLMSKIGGLSKPMS 379
           QKP+VS N L DFT IH+KFL PLP+++D+++SSL S FP V D+   M +I  LS   +
Sbjct: 323 QKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISPLSNISN 382

Query: 380 IAAAYSYLKKQYYAPSYLDIPVEAPG------NDHKPHGHNAIRLCHLFAQVCSVLKIDL 439
           + AA S L + ++AP  +D+ V   G        H+ HG NA+ +  LFA++C++ K DL
Sbjct: 383 LPAAMSSLNR-FFAP--VDVEVANQGCPVKLDEGHQSHGQNAVMISQLFAKLCTIQKSDL 442

Query: 440 SGVQSN-DNECLASMLDECSNVSSFSPYHCKPKDEDVKIWAQGVRKVSCRHLVFLWGLRE 499
           S +QSN D + LAS  DE +N  S +       DE+VK+W++  R+VS  +LVF+WGL +
Sbjct: 443 STIQSNEDFQALAS--DEHAN--SVTSCSKNAGDENVKVWSKNSRRVSSENLVFIWGLGK 502

Query: 500 GLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAINS-DNIVGSLR 559
            +TA  LK  L+ +H VF  EFDV+++D+  AI+VF +   SETFL A+N+ + + GSLR
Sbjct: 503 KMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSLR 562

Query: 560 EMVSEGLRAAGYETYKKICSFDLWEADLAESLERAI----LEADPETAQLDINYSNDSFI 611
           EMV+EGLR AGYETYK+ C    WEADLAESL++A+     + D +T   +I++SN+  I
Sbjct: 563 EMVAEGLRGAGYETYKRACRLGFWEADLAESLDKALESSDTDPDSDTKPSEIDWSNELAI 618

BLAST of CsaV3_7G027140 vs. ExPASy Swiss-Prot
Match: Q9LG26 (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 1.0e-55
Identity = 172/624 (27.56%), Postives = 294/624 (47.12%), Query Frame = 0

Query: 16  TTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFPWHRLQPFDTHDTAY 75
           + T+ + ++ V  SNF  +L DL++ +  +DF+A+ L+ TG +S PW     FD +D  Y
Sbjct: 31  SATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRY 90

Query: 76  CKAKYAAEKFQIIQFSLCPF--SVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHL 135
            K K +AEKF ++QF +CPF    R    +++P+NF +FPR EL    P++ F CQ + +
Sbjct: 91  LKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLCQTTSM 150

Query: 136 TSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELS---VADTI 195
             +A+  FDF   +++GISYLSR +E  A  ++        I++   + EL    +AD +
Sbjct: 151 DFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEELKLVRLADVL 210

Query: 196 FVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQ------YGSRPSIVIDVYSER 255
           F  R++  +  W+         S    S   ++  GS Q      +  RP++ +  ++  
Sbjct: 211 FAARMEKLLNEWRSGLLHGGNAS----SEFPRISNGSNQSMETVFHHMRPALSLKGFTSH 270

Query: 256 QVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKEL----QYLEDKE 315
           Q+ ++  +L++   DLV +  + K   ++ +  + T S  DK  L KE     + L +++
Sbjct: 271 QLRVLNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERK 330

Query: 316 NKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVH 375
            +   GFR+VID++++ +K IV +N   D   ++SKF+ PLP++ +++ +S++S FP + 
Sbjct: 331 IQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIV 390

Query: 376 DVKHLMSKIGGLSKPM-----SIAAAYSYLKKQY---------YAPSYLDIPVEA----- 435
           D K L++    L + M     S+++A+S L  Q          +    ++I VE      
Sbjct: 391 DTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRC 450

Query: 436 ----PGNDHKPHGHNAIRLCHLFAQVCSVLKIDLSGVQSNDNECLASMLDECSNVSSFS- 495
                G  H+  G++A     +FAQ C+ L  D       D+      L++  N    S 
Sbjct: 451 SNWNAGGKHEA-GYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSW 510

Query: 496 ----PYHCKPKDEDVKIWAQGVRKVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEF 555
                   +    +   W   V K    ++V +W     L AR       G  E  C+ F
Sbjct: 511 TRGDIIDLRTGHSNADNWR--VSKFKYENIVLIWNFPRKLKAR-------GIKECICKAF 570

Query: 556 ------DVRFVDKKCAIVVFSQPDLSETFL----DAINSDNIVGSLREM--VSEG--LRA 583
                  V  VD     V+F   +L   FL       +SD  V  L  +  + EG    A
Sbjct: 571 GSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGA 630

BLAST of CsaV3_7G027140 vs. ExPASy Swiss-Prot
Match: Q90ZA1 (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.7e-21
Identity = 98/389 (25.19%), Postives = 175/389 (44.99%), Query Frame = 0

Query: 25  QVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFP--WHRLQPFDTHDTAYCKAKYAA 84
           ++  SNF  +L  +   I ++DF+A+  + +G S  P        FDT +  Y K K  +
Sbjct: 2   EITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHS 61

Query: 85  EKFQIIQFSLCPFSV--RDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMAREG 144
            +F + QF LC F+    ++K +   +NF++FP+   N   P   F CQ S +  +A +G
Sbjct: 62  MEFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPK-PFNRNSPDKKFVCQSSSIDFLANQG 121

Query: 145 FDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPN----INAVKPSSE---LSVADTI--F 204
           FDF     +GI YL++ +E + + Q   +    N    ++ + P+S    +S+ D    F
Sbjct: 122 FDFNKVFRNGIPYLNQEEERVLRDQYEDRRSQSNGASTMSYISPNSSKTPVSIPDEQKGF 181

Query: 205 VQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID-VYSERQVLLVL 264
           + +V  RV+++    +  S   +      +KLI  +  +     I ++ V SE++   ++
Sbjct: 182 IDKVVERVEDFL-KNEQKSMNVEPCTGYQRKLIYQTLNWKYPRGIHVETVESEKKERYIV 241

Query: 265 ELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKENKKFRGFREV 324
                                      I    +E++  +E++ Q  E +E     GF  +
Sbjct: 242 ---------------------------ISKVDEEERKRMEQQKQAKEREELDDAVGFSRI 301

Query: 325 IDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDVKHLMSKIG 384
           I  IS+S K +V +N L D      +F   LP  ++E+    + VFPRV D K LM+   
Sbjct: 302 IQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTK-LMASTN 360

Query: 385 GLSKPM---SIAAAYSYLKKQYYAPSYLD 397
              + +   S+A     LK+  + P  +D
Sbjct: 362 PFKEIIYNTSLAELEKRLKEAPFKPPKVD 360

BLAST of CsaV3_7G027140 vs. ExPASy Swiss-Prot
Match: H9JAQ7 (Pre-piRNA 3'-exonuclease trimmer OS=Bombyx mori OX=7091 GN=PNLDC1 PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 4.4e-19
Identity = 87/349 (24.93%), Postives = 148/349 (42.41%), Query Frame = 0

Query: 26  VRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFPWHRLQPFDTHDTAYCKAKYAAEKF 85
           +   N+   L+++  +I DS FI+   + +   +    +   FDT++  Y K K      
Sbjct: 3   ITKENYYEELDNIAKNIKDSCFISFDAEFSAILTKESFKYSLFDTNEERYNKYKTQISTM 62

Query: 86  QIIQFSLCPFSVRDSKL---IAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMAREGFD 145
           +++Q  L  F   D +L   +A  Y FHL P+    IG  + S   Q S L  + +  FD
Sbjct: 63  KMMQVGLTMFQY-DRELDAYLATGYTFHLCPQ---LIGTINQSLIFQASTLKFLCKHNFD 122

Query: 146 FGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELSVADTIFVQRVKSRVKNW 205
           F  ++Y+G+ YLS++ E++         L   +     S  L   +   + +  S V  W
Sbjct: 123 FNKFIYEGLPYLSKSDEALLNRYRIENNLFDYV-----SESLEFDEEKQINQCSSEVSKW 182

Query: 206 KDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVIDVYSERQVLLVLELLKEFSDDLVP 265
                 SS   D +   +   I                    + LL LEL + +     P
Sbjct: 183 -----LSSSIEDTMYLDIDNAIC-------------------RYLLHLELRQRY-----P 242

Query: 266 VVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKENKKFRGFREVIDVISASQKPIV 325
            +++    G  + + ++   K  +      +  LED       GF  VI ++   +KPIV
Sbjct: 243 GILTTDSLG-NSKKILIYRDKNVEGAKNAPIAILEDNLIAYLLGFLHVIKLLETHKKPIV 302

Query: 326 SYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDVK---HLMSK 369
            +N   D  F+H++F+ PLP S   +  +++SVFP + D K   H MSK
Sbjct: 303 GHNMFLDMLFLHNQFIGPLPDSYTMFKKNINSVFPTIFDTKYISHAMSK 312

BLAST of CsaV3_7G027140 vs. ExPASy Swiss-Prot
Match: B2RXZ1 (Poly(A)-specific ribonuclease PNLDC1 OS=Mus musculus OX=10090 GN=Pnldc1 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.1e-16
Identity = 95/359 (26.46%), Postives = 151/359 (42.06%), Query Frame = 0

Query: 31  FLGSLEDLKNDISDSDFIALSLQRTG--SSSFPWHRLQPFDTHDTAYCKAKYAAEKFQII 90
           F  SL  L+  ++ +DF+ L ++ TG  S+     ++  FD     Y K + + ++F I 
Sbjct: 8   FEQSLPLLQELVAGADFVGLDIEFTGLRSNLSRPQQISLFDLPSEWYLKTRQSVQQFTIC 67

Query: 91  QFSLCPFSV---RDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMAREGFDFGA 150
           Q  L  FS      +K +AH  NF LFP      G+    FS Q S +  + + GFD+  
Sbjct: 68  QIGLSMFSSIEGESNKYVAHSCNFFLFP---TTFGILDSEFSFQASSVQFLNQYGFDYNK 127

Query: 151 WVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELSVADTIFVQRVKSRVKNWKDA 210
           ++ +GI Y++  QE   K  +    L  N          S  D   ++ V  +V  W D 
Sbjct: 128 FLKNGIPYMNEEQEKKIKHSI----LRGNWRV------RSSLDKDQIKVVIDKVTQWLDL 187

Query: 211 YDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVIDVYSERQVLLVLELLKEFSDDLVPVVI 270
            +   +       TL   I G + +              +V LVL               
Sbjct: 188 AEEGDQ------MTLPG-IAGFQAF--------------EVQLVLR-------------- 247

Query: 271 SAKGGGTQAVRAILTSSKEDKILLEKELQ----YLED---------KEN--KKFRGFREV 330
                  QA+  I T  KE+ ++++K  Q    YLE          KE      RGF   
Sbjct: 248 -------QALPNIWTVLKEEWVIVKKVSQPQRWYLEHASCDQVSCWKEQILLSARGFSVF 307

Query: 331 IDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDVKHLMSKI 370
             ++  +QKP+V +N + D   +H KF  PLP S D++  ++HS+FP + D K++   I
Sbjct: 308 FQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPVLIDTKNVTKDI 311

BLAST of CsaV3_7G027140 vs. ExPASy TrEMBL
Match: A0A5A7V1F6 (Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00470 PE=3 SV=1)

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 543/612 (88.73%), Postives = 574/612 (93.79%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTS-QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTT+ QWS++QVRNSNF G L DLKN ISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCKAKYAAEKFQI+QFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVK 180
           GMPSYSFSCQVSHLTS+AREGFDFGAWVYDGISYLSRAQESIAK QMG QTL PN +AVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 PSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID 240
            SSE SV DTIFVQRVKSRVKNWKDAYDSSSKT+DALLSTLKKLIVG EQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDK 300
           VYSERQ LL LELLKEFSDD+VPVVISAK GGTQA+RAILTSSKEDKILLEKELQ LED+
Sbjct: 241 VYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300

Query: 301 ENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRV 360
           ENKKFRGFREVI++ISASQKPIVSY+SLHDFTFIHSKFLAPLPTSIDE+ASSLH VFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 HDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHL 420
            +VKHLMSKIGGLSKPMSIAAA SYLKK YYAP+YLDIP+EAPGNDHKP GHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVS 480
           FA+VCS+LKIDLSGVQSN+NECLASML++CSNV SSFSPYH +PKDEDVKIWA+ VRK S
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDA 540
           CRHLVFLWG REG+TA LLKASLEG+HEVFCEEF VRFVDKKCAI+VFSQP LSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDIN 600
           INSD IVGSLREMVSEGLRA GYETYK++C FDLWEADLAESLERAI EADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600

Query: 601 YSNDSFIYLNDL 611
           YSND+ I L+DL
Sbjct: 601 YSNDTVISLDDL 612

BLAST of CsaV3_7G027140 vs. ExPASy TrEMBL
Match: A0A5D3CA51 (Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00350 PE=3 SV=1)

HSP 1 Score: 1055.4 bits (2728), Expect = 8.8e-305
Identity = 538/629 (85.53%), Postives = 571/629 (90.78%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTS-QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTT+ QWS++QVRNSNF G L DLKN ISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCKAKYAAEKFQI+QFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYD----GISYL-------------SRAQESIA 180
           GMPSYSFSCQVSHLTS+AREGFDFGAWVYD    G+ +L               AQESIA
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDDSTMGLQWLDILQEFFFCPLRAKTAQESIA 180

Query: 181 KTQMGSQTLPPNINAVKPSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKK 240
           K QMG QTL PN +AVK SSE SV DTIFVQRVKSRVKNWKDAYDSSSKT+DALLSTLKK
Sbjct: 181 KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK 240

Query: 241 LIVGSEQYGSRPSIVIDVYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSS 300
           LIVG EQYGSRPSIVIDVYSERQ LL LELLKEFSDD+VPVVISAK GGTQA+RAILTSS
Sbjct: 241 LIVGIEQYGSRPSIVIDVYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS 300

Query: 301 KEDKILLEKELQYLEDKENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLP 360
           KEDKILLEKELQ LED+ENKKFRGFREVI++ISASQKPIVSY+SLHDFTFIHSKFLAPLP
Sbjct: 301 KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP 360

Query: 361 TSIDEYASSLHSVFPRVHDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAP 420
           TSIDE+ASSLH VFPRV +VKHLMSKIGGLSKPMSIAAA SYLKK YYAP+YLDIP+EAP
Sbjct: 361 TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP 420

Query: 421 GNDHKPHGHNAIRLCHLFAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCK 480
           GNDHKP GHNAIRLCHLFA+VCS+LKIDLSGVQSN+NECLASML++CSNV SSFSPYH +
Sbjct: 421 GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE 480

Query: 481 PKDEDVKIWAQGVRKVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKC 540
           PKDEDVKIWA+ VRK SCRHLVFLWG REG+TA LLKASLEG+HEVFCEEF VRFVDKKC
Sbjct: 481 PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC 540

Query: 541 AIVVFSQPDLSETFLDAINSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESL 600
           AI+VFSQP LSETFLDAINSD IVGSLREMVSEGLRA GYETYK++C FDLWEADLAESL
Sbjct: 541 AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL 600

Query: 601 ERAILEADPETAQLDINYSNDSFIYLNDL 611
           ERAI EADPETAQLDINYSND+ I L+DL
Sbjct: 601 ERAIFEADPETAQLDINYSNDTVISLDDL 629

BLAST of CsaV3_7G027140 vs. ExPASy TrEMBL
Match: A0A1S3BT38 (poly(A)-specific ribonuclease PARN-like OS=Cucumis melo OX=3656 GN=LOC103492866 PE=3 SV=1)

HSP 1 Score: 998.8 bits (2581), Expect = 9.8e-288
Identity = 510/612 (83.33%), Postives = 546/612 (89.22%), Query Frame = 0

Query: 1   MASRFSYFQLHRRLYTTTS-QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTT+ QWS++QVRNSNF   L DLKN ISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCKAKYAAEKFQI+QFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVK 180
           GMPSYSFSCQVSHLTS+AREGFDFGAWVYDGISYLSRAQESIAK QMG QTL PN +AVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 PSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID 240
            SSE SV DTIFVQRVKSRVKNWKDAYDSSSKT+DALLSTLKKLIVG EQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDK 300
           VYSERQ LL LE+      DL+   I            +  + K   + ++KELQ LED+
Sbjct: 241 VYSERQTLLALEM------DLLECAIQ-----------LCRTCKLFCVPVQKELQNLEDE 300

Query: 301 ENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRV 360
           ENKKFRGFREVI++ISASQKPIVSY+SLHDFTFIHSKFLAPLPTSIDE+ASSLH VFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 HDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHL 420
            +VKHLMSKIGGLSKPMSIAAA SYLKK YYAP+YLDIP+EAPGNDHKP GHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVS 480
           FA+VCS+LKIDLSGVQSN+NECLASML++CSNV SSFSPYH +PKDEDVKIWA+ VRK S
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDA 540
           CRHLVFLWG REG+TA LLKASLEG+HEVFCEEF VRFVDKKCAI+VFSQP LSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDIN 600
           INSD IVGSLREMVSEGLRA GYETYK++C FDLWEADLAESLERAI EADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 595

Query: 601 YSNDSFIYLNDL 611
           YSND+ I L+DL
Sbjct: 601 YSNDTVISLDDL 595

BLAST of CsaV3_7G027140 vs. ExPASy TrEMBL
Match: A0A6J1GP80 (poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456191 PE=3 SV=1)

HSP 1 Score: 937.2 bits (2421), Expect = 3.5e-269
Identity = 479/619 (77.38%), Postives = 536/619 (86.59%), Query Frame = 0

Query: 1   MASRFSYFQL-HRRLYTTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFS  +L  RRL+T T+Q SVRQ+RN++F G L DLKN ISDSDFIALSLQ TGSSS
Sbjct: 1   MASRFSSLRLQRRRLHTATNQLSVRQIRNTDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRLQ FDT+DTAYCKAKYAAEKFQI+QF+LCPFSVR+SKLIAHPYNFHLFPRD+LNI
Sbjct: 61  FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVK 180
           GMPSYSFSCQVSHLTSMAREGFDF A +YDGISYLSRAQESIAK ++G   L P+  AVK
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGRSFLTPSTYAVK 180

Query: 181 PSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID 240
            SS  ++AD++FVQRVKSRVKNWKDA +SS+KT+DALLS+LKKLI+GSEQYGSRPS+ ID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEQYGSRPSMTID 240

Query: 241 VYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDK 300
           V SERQVLLVLELL EFSDDLVPVV  AKGGGTQA+RAILTSSKEDKILLEKELQ LE++
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVNPAKGGGTQAIRAILTSSKEDKILLEKELQNLEEE 300

Query: 301 ENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRV 360
           ENKKFRGFREV+D+ISASQKPI+SYNSL+DF FIHSKFLAPLPT +DE+ASSLH VFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPILSYNSLNDFAFIHSKFLAPLPTGMDEFASSLHLVFPRV 360

Query: 361 HDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHL 420
            DVKHL+SKIGGLSKP+SIA+A SYLK  Y+AP  LDIPVEA GND K HGHNAI LCHL
Sbjct: 361 LDVKHLISKIGGLSKPISIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILLCHL 420

Query: 421 FAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVS 480
           FA+ CSVLKIDL GVQSN+N CLAS LD C+NV  SFSP H + +DED+KI  + VRKVS
Sbjct: 421 FAKACSVLKIDLGGVQSNNN-CLASKLDGCANVFGSFSPDHHESEDEDIKISTKNVRKVS 480

Query: 481 CRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDA 540
           CRHLVFLWG R+G+TA+ +K +LEG+HEVFCEEFDVRFVDKKCAIVVF QP LSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTAQSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540

Query: 541 INSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERA-------ILEADPE 600
           INSD IVG L++MVSEGL+A GYETYK++C   LWEADLAESLERA         EADPE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERASSEQHHSSFEADPE 600

Query: 601 TAQLDINYSNDSFIYLNDL 611
           T +LDI YSNDS I L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 618

BLAST of CsaV3_7G027140 vs. ExPASy TrEMBL
Match: A0A6J1JW45 (poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488047 PE=3 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.9e-267
Identity = 476/619 (76.90%), Postives = 530/619 (85.62%), Query Frame = 0

Query: 1   MASRFSYFQL-HRRLYTTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60
           MASRFS  QL  RRL+  T+Q SVRQ+RNS+F G L DLKN ISDSDFIALSLQ TGSSS
Sbjct: 1   MASRFSSLQLQRRRLHIATNQLSVRQIRNSDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60

Query: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRLQ FDT+DTAYCKAKYAAEKFQI+QF+LCPFSVR+SKLIAHPYNFHLFPRD+LNI
Sbjct: 61  FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120

Query: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVK 180
           GMPSYSFSCQVSHLTSMA EGFDF A +YDGISYLSRAQESIAK ++G   L P+   VK
Sbjct: 121 GMPSYSFSCQVSHLTSMAHEGFDFDACIYDGISYLSRAQESIAKVRIGRPILTPSTYDVK 180

Query: 181 PSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID 240
            SS  ++AD++FVQRVKSRVKNWKDA +SS+KT+DALLS+LKKLI+GSE+YGSRPS+ ID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEEYGSRPSMTID 240

Query: 241 VYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDK 300
           V SERQVLLVLELL EFSDDLVPVVI  KGGGTQA+RAI TSSKEDKILLEKELQ LE++
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVIPTKGGGTQAIRAIWTSSKEDKILLEKELQNLEEE 300

Query: 301 ENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRV 360
           ENKKFRGFREV+D+ISASQKPIVSYNSL+DF F+HSKFLAPLPT IDE+ASSLH VFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPIVSYNSLNDFAFVHSKFLAPLPTGIDEFASSLHLVFPRV 360

Query: 361 HDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHL 420
            DVKHL+SKIGGLSKP SIA+A SYLK  Y+AP  LDIPVEA GND K HGHNAI +CHL
Sbjct: 361 LDVKHLISKIGGLSKPTSIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILVCHL 420

Query: 421 FAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVS 480
           FA+ CSVLKIDL GVQSN+  CLAS LD C+NV  SFSP H K +DED+KI  + VRK+S
Sbjct: 421 FAKACSVLKIDLGGVQSNN--CLASKLDGCANVFGSFSPDHHKSEDEDIKISTKNVRKIS 480

Query: 481 CRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDA 540
           CRHLVFLWG R+G+TAR +K +LEG+HEVFCEEFDVRFVDKKCAIVVF QP LSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTARSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540

Query: 541 INSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAI-------LEADPE 600
           INSD IVG L++MVSEGL+A GYETYK++C   LWEADLAESLERA         EADPE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERATSEHHHSSFEADPE 600

Query: 601 TAQLDINYSNDSFIYLNDL 611
           T +LDI YSNDS I L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 617

BLAST of CsaV3_7G027140 vs. TAIR 10
Match: AT3G25430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 595.1 bits (1533), Expect = 6.3e-170
Identity = 316/605 (52.23%), Postives = 432/605 (71.40%), Query Frame = 0

Query: 20  QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFPWHRLQPFDTHDTAYCKAK 79
           +WSV+QV+ SNF  +L++++  I  SDFIALSLQ TGS +  WHR+   DT  T+Y KAK
Sbjct: 23  RWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTSYLKAK 82

Query: 80  YAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMARE 139
           YAAE++QI+QF+LCPFS++ SKL  HPYNFHLFPRDEL  GMPSYSFSCQ S LT+MARE
Sbjct: 83  YAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLTAMARE 142

Query: 140 GFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELSVADTIFVQRVKSRV 199
           GFDF   +Y+GISYLSRAQES +K    +  L  ++     SS  +VADT+FV R++SRV
Sbjct: 143 GFDFNICIYEGISYLSRAQESASKFLSENPILADSVTV--SSSPATVADTVFVGRIRSRV 202

Query: 200 KNWKDA-YDSSSKT-SDALLSTLKKLIVGSEQYGSRPSIVIDVYSERQVLLVLELLKEFS 259
           KNW+ +  DS SKT  D L+S+L++L++GSEQYGSR  + IDV SERQV L+LE+L EFS
Sbjct: 203 KNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILEMLTEFS 262

Query: 260 DDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKENKKFRGFREVIDVISAS 319
           DD+VP+++++K  GTQAVR +  SSKEDK L ++EL+ LE +EN++ RGFREV+D IS+S
Sbjct: 263 DDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDLEKEENRRVRGFREVVDFISSS 322

Query: 320 QKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDVKHLMSKIGGLSKPMS 379
           QKP+VS N L DFT IH+KFL PLP+++D+++SSL S FP V D+   M +I  LS   +
Sbjct: 323 QKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISPLSNISN 382

Query: 380 IAAAYSYLKKQYYAPSYLDIPVEAPG------NDHKPHGHNAIRLCHLFAQVCSVLKIDL 439
           + AA S L + ++AP  +D+ V   G        H+ HG NA+ +  LFA++C++ K DL
Sbjct: 383 LPAAMSSLNR-FFAP--VDVEVANQGCPVKLDEGHQSHGQNAVMISQLFAKLCTIQKSDL 442

Query: 440 SGVQSN-DNECLASMLDECSNVSSFSPYHCKPKDEDVKIWAQGVRKVSCRHLVFLWGLRE 499
           S +QSN D + LAS  DE +N  S +       DE+VK+W++  R+VS  +LVF+WGL +
Sbjct: 443 STIQSNEDFQALAS--DEHAN--SVTSCSKNAGDENVKVWSKNSRRVSSENLVFIWGLGK 502

Query: 500 GLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAINS-DNIVGSLR 559
            +TA  LK  L+ +H VF  EFDV+++D+  AI+VF +   SETFL A+N+ + + GSLR
Sbjct: 503 KMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSLR 562

Query: 560 EMVSEGLRAAGYETYKKICSFDLWEADLAESLERAI----LEADPETAQLDINYSNDSFI 611
           EMV+EGLR AGYETYK+ C    WEADLAESL++A+     + D +T   +I++SN+  I
Sbjct: 563 EMVAEGLRGAGYETYKRACRLGFWEADLAESLDKALESSDTDPDSDTKPSEIDWSNELAI 618

BLAST of CsaV3_7G027140 vs. TAIR 10
Match: AT1G55870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 7.2e-57
Identity = 172/624 (27.56%), Postives = 294/624 (47.12%), Query Frame = 0

Query: 16  TTTSQWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFPWHRLQPFDTHDTAY 75
           + T+ + ++ V  SNF  +L DL++ +  +DF+A+ L+ TG +S PW     FD +D  Y
Sbjct: 31  SATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRY 90

Query: 76  CKAKYAAEKFQIIQFSLCPF--SVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHL 135
            K K +AEKF ++QF +CPF    R    +++P+NF +FPR EL    P++ F CQ + +
Sbjct: 91  LKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLCQTTSM 150

Query: 136 TSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELS---VADTI 195
             +A+  FDF   +++GISYLSR +E  A  ++        I++   + EL    +AD +
Sbjct: 151 DFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEELKLVRLADVL 210

Query: 196 FVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQ------YGSRPSIVIDVYSER 255
           F  R++  +  W+         S    S   ++  GS Q      +  RP++ +  ++  
Sbjct: 211 FAARMEKLLNEWRSGLLHGGNAS----SEFPRISNGSNQSMETVFHHMRPALSLKGFTSH 270

Query: 256 QVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKEL----QYLEDKE 315
           Q+ ++  +L++   DLV +  + K   ++ +  + T S  DK  L KE     + L +++
Sbjct: 271 QLRVLNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERK 330

Query: 316 NKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVH 375
            +   GFR+VID++++ +K IV +N   D   ++SKF+ PLP++ +++ +S++S FP + 
Sbjct: 331 IQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIV 390

Query: 376 DVKHLMSKIGGLSKPM-----SIAAAYSYLKKQY---------YAPSYLDIPVEA----- 435
           D K L++    L + M     S+++A+S L  Q          +    ++I VE      
Sbjct: 391 DTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRC 450

Query: 436 ----PGNDHKPHGHNAIRLCHLFAQVCSVLKIDLSGVQSNDNECLASMLDECSNVSSFS- 495
                G  H+  G++A     +FAQ C+ L  D       D+      L++  N    S 
Sbjct: 451 SNWNAGGKHEA-GYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSW 510

Query: 496 ----PYHCKPKDEDVKIWAQGVRKVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEF 555
                   +    +   W   V K    ++V +W     L AR       G  E  C+ F
Sbjct: 511 TRGDIIDLRTGHSNADNWR--VSKFKYENIVLIWNFPRKLKAR-------GIKECICKAF 570

Query: 556 ------DVRFVDKKCAIVVFSQPDLSETFL----DAINSDNIVGSLREM--VSEG--LRA 583
                  V  VD     V+F   +L   FL       +SD  V  L  +  + EG    A
Sbjct: 571 GSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGA 630

BLAST of CsaV3_7G027140 vs. TAIR 10
Match: AT1G55870.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 5.4e-28
Identity = 127/502 (25.30%), Postives = 221/502 (44.02%), Query Frame = 0

Query: 136 MAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELS---VADTIFV 195
           +A+  FDF   +++GISYLSR +E  A  ++        I++   + EL    +AD +F 
Sbjct: 4   LAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEELKLVRLADVLFA 63

Query: 196 QRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQ------YGSRPSIVIDVYSERQV 255
            R++  +  W+         S    S   ++  GS Q      +  RP++ +  ++  Q+
Sbjct: 64  ARMEKLLNEWRSGLLHGGNAS----SEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQL 123

Query: 256 LLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKEL----QYLEDKENK 315
            ++  +L++   DLV +  + K   ++ +  + T S  DK  L KE     + L +++ +
Sbjct: 124 RVLNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERKIQ 183

Query: 316 KFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDV 375
              GFR+VID++++ +K IV +N   D   ++SKF+ PLP++ +++ +S++S FP + D 
Sbjct: 184 SAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDT 243

Query: 376 KHLMSKIGGLSKPM-----SIAAAYSYLKKQY---------YAPSYLDIPVEA------- 435
           K L++    L + M     S+++A+S L  Q          +    ++I VE        
Sbjct: 244 KILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSN 303

Query: 436 --PGNDHKPHGHNAIRLCHLFAQVCSVLKIDLSGVQSNDNECLASMLDECSNVSSFS--- 495
              G  H+  G++A     +FAQ C+ L  D       D+      L++  N    S   
Sbjct: 304 WNAGGKHEA-GYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTR 363

Query: 496 --PYHCKPKDEDVKIWAQGVRKVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEF-- 555
                 +    +   W   V K    ++V +W     L AR       G  E  C+ F  
Sbjct: 364 GDIIDLRTGHSNADNWR--VSKFKYENIVLIWNFPRKLKAR-------GIKECICKAFGS 423

Query: 556 ----DVRFVDKKCAIVVFSQPDLSETFL----DAINSDNIVGSLREM--VSEG--LRAAG 583
                V  VD     V+F   +L   FL       +SD  V  L  +  + EG    AA 
Sbjct: 424 ASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAAD 483

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004148964.10.0e+00100.00poly(A)-specific ribonuclease PARN-like [Cucumis sativus] >KAE8646280.1 hypothet... [more]
KAA0059619.10.0e+0088.73poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa][more]
TYK08152.11.8e-30485.53poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa][more]
XP_008451634.12.0e-28783.33PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis melo][more]
XP_038899639.14.2e-28581.39poly(A)-specific ribonuclease PARN-like isoform X2 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q8W4C38.8e-16952.23Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g2... [more]
Q9LG261.0e-5527.56Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 ... [more]
Q90ZA14.7e-2125.19Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1[more]
H9JAQ74.4e-1924.93Pre-piRNA 3'-exonuclease trimmer OS=Bombyx mori OX=7091 GN=PNLDC1 PE=1 SV=2[more]
B2RXZ12.1e-1626.46Poly(A)-specific ribonuclease PNLDC1 OS=Mus musculus OX=10090 GN=Pnldc1 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A5A7V1F60.0e+0088.73Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CA518.8e-30585.53Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3BT389.8e-28883.33poly(A)-specific ribonuclease PARN-like OS=Cucumis melo OX=3656 GN=LOC103492866 ... [more]
A0A6J1GP803.5e-26977.38poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita moschata OX=3662... [more]
A0A6J1JW451.9e-26776.90poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita maxima OX=3661 G... [more]
Match NameE-valueIdentityDescription
AT3G25430.16.3e-17052.23Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT1G55870.17.2e-5727.56Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT1G55870.25.4e-2825.30Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 275..461
e-value: 1.5E-24
score: 88.6
coord: 25..225
e-value: 5.4E-29
score: 103.2
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 26..413
e-value: 1.8E-60
score: 204.9
NoneNo IPR availablePANTHERPTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1coord: 13..593
NoneNo IPR availablePANTHERPTHR15092:SF42POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKEcoord: 13..593
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 15..390

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G027140.1CsaV3_7G027140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding