CsaV3_7G026730 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G026730
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	S4 RNA-binding domain-containing protein
Location	chr7: 16285362 .. 16289164 (-)
RNA-Seq Expression	CsaV3_7G026730
Synteny	CsaV3_7G026730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAAATGGAAGTACAAAGTAGTGGCCATCGCATCCATCAATGCCATTTTCTCCGAGAGGAATTTGCATAGCGCTTTGAAAAAACAAAGCCCCATCATGTTCAAGTGCCTCCTGAGTCGGAATAATTGTGCAAGGATTTTTCTCTTCTCACCACTATCTTCCTCTCCGATTCATTCACCTTCTCCTAAAGCCTTTTCCGTTGCCAAGTCCGGAAAGATTCAGTCATTGACCCTGTACGGATTTTGTTTCTTTTTAATATCTTCCCAAATCTCTGAAATCTGTGTTTGTAAGTTTGAATGAAGCTGTTTTTTATGTTTCTTAGGAAAAAGAAGAGGAGATTGGATGAGGTATGTGTCGAAAGATACCAGCAATTCAGCCGAACAATGATACAGTCCTGGATATTACAAGGTAACCCTAATTGGATTTCTTAATCTGATGAACTTTTTTTCATTTTCGAATTCCTTCTCTTTCTGTGTTCCATTGGATGGGTGTTTGTTTAGGTAAAGTATTGGTAGATGGCAAAGTAATCAGTAAAGCTGGAACACCCGTCGCCGATAAAGCTAAAGTTGAGATAATTGCTGAAGTTCCCAAATATGTATGTAGGTGATAAAACTTAGCTGAAAACTACATGTTTTTCTTTTCCAATGTATATTGATGTTTCATCCTCGTTAGACTAGATGAAGTTTCAAAAGTTAATTTATCATATATGTTTCTTTTCTCTTTCTATTTCATGAAATCCAGAGCAGGATTGAAGTTGGAAGCTGCTATTGAACAGTTGGATGTTGATGTTGATGGAAAAGTTGCTCTTGATGCTGGGCTATCCACTGGAGGATTTACTGACTGTTTGCTTCAGCATGGGGCTTCATTTGTCTATGGAGTTGATGTTGGTTATGGGCAGGTGATATTTATAAACTTCTTTCACATATTGTTCTTTACCAACTCAATATTGTTGTCGGTTGATGAGGATATAGTTTTACAGTCAAACCCAAATTTTGGGTCCAAAATAAAATTTGCCCACTTTTTAATTCTTAAGTTTTTTACTTTTTGCTTGTGTCATCCTTAGCGGAAATTAACAAAACGATCTTATTGTGCATGCGTTGGGGTCTTGAGTCTCTATTTCTCACTATTGTAAATCAAAGAGCGAGAGAGTAGAGAGAGTTAGAAGCAAAAAAACCTGAACTTAAAGGAGTGAAAGGGATAAACAGAGAGTGGGGAATAGAAAAACCTCATGATAGCAGGATCTCAACCTGCATGTACAATGTTTCATTTTGGTAACTTCACGCCAATATGACATAAGCAGAAGGTAGAAAAACAATTTTTTTAAAGATTGGGTCAAGTGTAATTCGGGCCTTTTAAAATGGGTAAGCCGGACAAAAGAACCTATGGATGAGTGCAACTCTCTCTAATAGAAAATCAGTACTACCCTTCATTTTTCTGGAAAGTTTAAGTAAAGGTCTTATTTACTTGTCTATCTATATATACGAGAAGTCTTTGAATTGAAGAAGAGGTACATCAAAGAAGGGGGAGTTGACTAGAAATTAAATCCAATTCCAGGCTTAATAAGAGATTACAAGATACCATCCAACTAATCAGATTTAATAAACAAGTGTGTTTAACCCAGTCAAGTGATAAACCTTTCTTTACTTTTGATACCTTCAATGTTTATGTGGGAAATTAGCATATAGTATCCCTTCCACTTTCTTCTGTTCCATTGTGATGGGTCATTGATCTGCAGAATTTTTAGGTTGCTGACAAGATTCGTCGAGATGAGCGTGTTTGTGTGATGGAAAGGACAAACTTAAGATATCTTGCTGGACTTCCTCAAAAAGTTGATATTGTGACTCTGGACCTTTCTTTCATCTCTATTCTCTTGGTAAAGGTTTCTGTTACTTTGCACACCGGTTACACAGTTTGTTCCTTCTAACTTGATAACAGGGCAACATTTTCAATTTTTTAAGTTGATTATTTTATTTTATTTTTAATTTGCTGTTAGGATCTTCTTTATCTTATTTTATGTAAAGAACTTGTTTAGCTGGATATCTATGAACAAGTATTTTGTTTTAAGACATACTTAGCTGCAGAGGTACATGACAATTTCCATACTTAGGATCTCAAAAGAAGATGTAAAAAGAGATATCATGTTTTAAGGATGATCTCATACTAAGTTGGTACTTTTCCAGTTTTGATAATGATCAATATGCTCTTAGAAACACGAGTGACAAGTACAGAACGGGCAAAAGTTCAAGTCTTAGATGGCATCTTTGGGGGACCGATCTTGAAATCTAAAATTTGGGGATTAAAGGTGTTGGAACTTCAGGGAAGAAATAAGACGTTTGGGAGTTAGATGTCTGTAGCTAATTAATGGCATATAAACCAGCTTTCTTATCATTTTTTTTTTTTTAGTGTTTGAACAAAATAATAGTGTGAATAAATGAATAATTATCATAGACTTGACGCTTCTTGTTGTATTGTGGCACTGGCACCTCCATCTATTGGCTGTCTTATTTTAATTAGTTGGTCTGGCAAGTATGGTAGAAATATTATTACAGCCACGGTTTATGATATTATAAATTGATTTATTCAAGCGTTGGTAAGGTCTTGCAATGGTCATTTAAAGTACTTTTGTTCTTCTCTTTATTCCATTTGTTTGCATGATCTTCGATGAAATGTTTCTCATTAAAAAAAATTCATTTGCACGGTCTTATATGTTTATGTATCAGGTTATGCCCGCTGTGATCAATGTGATGAAGGAAACGTCAACCATAGTTACTTTGGTGAAACCTCAATTTGAATGTCGCAGATCACAAGTAAGAAAAGCTCTGAGTTATTTTCCTGCTTGTCTGTGGCAGTTACTTCATAGGGATTGGCTGTGATTTTTTAAGCATTATAGTTAACGTGTCAAAACAAAGACAACCTAATATCTCGAAAGGCAGGTTGTGTTAGTGCAATGCTGACCCTGACTTGCCTCTATGCTATATCATTTTATAATCTTCTGACAAAACCATGGAAAGCAGGCATATTGTAGAAATAGTTAAAATTTGTGTTGACTGGATTTGACGATATGGTTCATTGCAGGTAGGAGGTGGGGGAATCGTGAGAGATCCTCAAGTCCACCAGGAGGTAAACATTTATTTCTCCTTCACGCCTATTCACAATATTACTCTTGTGAATGGAATGGATATTAGTTTCTTTCACTTTGTATTGCTTATTGGCTTTAATTAATAAGGATGAATAAATGAATAATGTAGGTTCTTGAGAAGATCATAAAGGGTGTAGAGAATTTCGGATTCTGCAGCAAAGGTTGGATTGAATCACCATTGAAGGGCGCTGAGGGTAATACAGAATTTTTGGTTTGCTTCGACAGGACAACGGTTTCTACTTCGAATCAAGAATGATTCTTCATCTAGTTTATTATCCTTTCTGCAAACCAGCAGTTTCTAGTTTCAAATCTACCTACTTCACTTCATAATCCAAAAGTTAAGTAGCCTCCCACACATTTTACTTAATATGATTGATTATTATACCAACTGTGGCCAATCCAACTTACATCACTTCGGTGTGCTGAATTGAATTTTACTGATGTCGTATCCTCAAAGTTGACCCAACTCCAGGTGTTTTCTTGAAGACCCCTCATTCTCTCCTCATTTTTTAATTTGATTCTTATGGATATTATCAATGTGTTCAACCTCAAAGGCTTAGATCTCTTTCAAATGAAAAATACAATGGACGTAATTCTTGAGGACGTTTCAAATGTCAAGGTCAAAGAGTTTTAAAAATGATAAGAGCAGCTAGTGATCGGGCGC

mRNA sequence

ATGTTCAAGTGCCTCCTGAGTCGGAATAATTGTGCAAGGATTTTTCTCTTCTCACCACTATCTTCCTCTCCGATTCATTCACCTTCTCCTAAAGCCTTTTCCGTTGCCAAGTCCGGAAAGATTCAGTCATTGACCCTGAAAAAGAAGAGGAGATTGGATGAGGTATGTGTCGAAAGATACCAGCAATTCAGCCGAACAATGATACAGTCCTGGATATTACAAGGTAAAGTATTGGTAGATGGCAAAGTAATCAGTAAAGCTGGAACACCCGTCGCCGATAAAGCTAAAGTTGAGATAATTGCTGAAGTTCCCAAATATGTATGTAGAGCAGGATTGAAGTTGGAAGCTGCTATTGAACAGTTGGATGTTGATGTTGATGGAAAAGTTGCTCTTGATGCTGGGCTATCCACTGGAGGATTTACTGACTGTTTGCTTCAGCATGGGGCTTCATTTGTCTATGGAGTTGATGTTGGTTATGGGCAGGTTGCTGACAAGATTCGTCGAGATGAGCGTGTTTGTGTGATGGAAAGGACAAACTTAAGATATCTTGCTGGACTTCCTCAAAAAGTTGATATTGTGACTCTGGACCTTTCTTTCATCTCTATTCTCTTGGTTATGCCCGCTGTGATCAATGTGATGAAGGAAACGTCAACCATAGTTACTTTGGTGAAACCTCAATTTGAATGTCGCAGATCACAAGTAGGAGGTGGGGGAATCGTGAGAGATCCTCAAGTCCACCAGGAGGTTCTTGAGAAGATCATAAAGGGTGTAGAGAATTTCGGATTCTGCAGCAAAGGTTGGATTGAATCACCATTGAAGGGCGCTGAGGGTAATACAGAATTTTTGGTTTGCTTCGACAGGACAACGGTTTCTACTTCGAATCAAGAATGA

Coding sequence (CDS)

ATGTTCAAGTGCCTCCTGAGTCGGAATAATTGTGCAAGGATTTTTCTCTTCTCACCACTATCTTCCTCTCCGATTCATTCACCTTCTCCTAAAGCCTTTTCCGTTGCCAAGTCCGGAAAGATTCAGTCATTGACCCTGAAAAAGAAGAGGAGATTGGATGAGGTATGTGTCGAAAGATACCAGCAATTCAGCCGAACAATGATACAGTCCTGGATATTACAAGGTAAAGTATTGGTAGATGGCAAAGTAATCAGTAAAGCTGGAACACCCGTCGCCGATAAAGCTAAAGTTGAGATAATTGCTGAAGTTCCCAAATATGTATGTAGAGCAGGATTGAAGTTGGAAGCTGCTATTGAACAGTTGGATGTTGATGTTGATGGAAAAGTTGCTCTTGATGCTGGGCTATCCACTGGAGGATTTACTGACTGTTTGCTTCAGCATGGGGCTTCATTTGTCTATGGAGTTGATGTTGGTTATGGGCAGGTTGCTGACAAGATTCGTCGAGATGAGCGTGTTTGTGTGATGGAAAGGACAAACTTAAGATATCTTGCTGGACTTCCTCAAAAAGTTGATATTGTGACTCTGGACCTTTCTTTCATCTCTATTCTCTTGGTTATGCCCGCTGTGATCAATGTGATGAAGGAAACGTCAACCATAGTTACTTTGGTGAAACCTCAATTTGAATGTCGCAGATCACAAGTAGGAGGTGGGGGAATCGTGAGAGATCCTCAAGTCCACCAGGAGGTTCTTGAGAAGATCATAAAGGGTGTAGAGAATTTCGGATTCTGCAGCAAAGGTTGGATTGAATCACCATTGAAGGGCGCTGAGGGTAATACAGAATTTTTGGTTTGCTTCGACAGGACAACGGTTTCTACTTCGAATCAAGAATGA

Protein sequence

MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERYQQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQLDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIVRDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE*

Homology

[Close]

BLAST of CsaV3_7G026730 vs. NCBI nr
Match: XP_004149317.1 (uncharacterized protein LOC101212823 [Cucumis sativus] >KGN44671.1 hypothetical protein Csa_015760 [Cucumis sativus])

HSP 1 Score: 581.3 bits (1497), Expect = 4.9e-162
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY
Sbjct: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of CsaV3_7G026730 vs. NCBI nr
Match: XP_008458092.1 (PREDICTED: putative rRNA methyltransferase YqxC isoform X1 [Cucumis melo] >KAA0034847.1 putative rRNA methyltransferase YqxC isoform X1 [Cucumis melo var. makuwa] >TYJ96659.1 putative rRNA methyltransferase YqxC isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 569.7 bits (1467), Expect = 1.5e-158
Identity = 290/296 (97.97%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KCLLSRNNCARI LFSP S+SPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY
Sbjct: 1   MSKCLLSRNNCARILLFSPPSTSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LDVDV+GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVNGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGGGGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of CsaV3_7G026730 vs. NCBI nr
Match: XP_038899562.1 (putative rRNA methyltransferase YqxC [Benincasa hispida])

HSP 1 Score: 557.4 bits (1435), Expect = 7.6e-155
Identity = 284/296 (95.95%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KC+LSRNNCARIFL SPLSSSPI S SPKAFSVAKSGKI SL LKKK+RLDEVCVERY
Sbjct: 1   MSKCILSRNNCARIFLLSPLSSSPIQSASPKAFSVAKSGKILSLNLKKKKRLDEVCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQ+SRTMIQSWILQGKVLVDGKVISKAGTPV DKAKVEIIAEVPKYVCRAGLKLEAAIEQ
Sbjct: 61  QQYSRTMIQSWILQGKVLVDGKVISKAGTPVGDKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGGGGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of CsaV3_7G026730 vs. NCBI nr
Match: XP_023513431.1 (uncharacterized protein LOC111778052 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.3 bits (1357), Expect = 8.4e-146
Identity = 268/296 (90.54%), Postives = 280/296 (94.59%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KCLLSRNN ARIFL SP +   IHS SPKAFSVAK GKIQSL LKKK+RLDE+CVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQ+SRT+IQSWILQGKVLVDGKV+SKAGTPV DKAKVEIIAEVPKYVCRAG KLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGG GIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVL+KIIKGVE+FGFCSKGWIESPLKGAEGNTEFLVCF RTT+S +NQ+
Sbjct: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296

[Close]

BLAST of CsaV3_7G026730 vs. NCBI nr
Match: XP_023004131.1 (uncharacterized protein LOC111497556 [Cucurbita maxima])

HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145
Identity = 267/296 (90.20%), Postives = 281/296 (94.93%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KCLLSRNN ARIFL SP +   IHS SPKAFSVAKSGKIQSL LKKK+RLDE+CVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPNCCRIHSASPKAFSVAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQ+SRT+IQSWILQGKVLVDGKV+SKAGTPV DKAKVEIIAEVPKYVCRAG KLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           R+LAG+PQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGG G+V
Sbjct: 181 RHLAGVPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGVV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVE+FGFCSKGWIESPLKGAEGNTEFLVCF RTT+S +NQ+
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy Swiss-Prot
Match: P19672 (Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) OX=224308 GN=yqxC PE=3 SV=3)

HSP 1 Score: 182.6 bits (462), Expect = 6.7e-45
Identity = 105/242 (43.39%), Postives = 144/242 (59.50%), Query Frame = 0


Query: 48  KKRRLDEVCVERYQQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYV 107
           KK RLD + VER    +R   +  I+ G V  +   + K G  +     + +     +YV
Sbjct: 4   KKERLDVLLVERGLAETREKAKRAIMAGIVYSNENRLDKPGEKIDRDLPLTVKGNPLRYV 63

Query: 108 CRAGLKLEAAIEQLDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIR 167
            R GLKLE A+++  V V  K+ +D G STGGFTDC LQ+GA   Y VDVGY Q+A K+R
Sbjct: 64  SRGGLKLEKALKEFPVSVKDKIMIDIGSSTGGFTDCALQNGAKQSYAVDVGYNQLAWKLR 123

Query: 168 RDERVCVMERTNLRYLA------GLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVT 227
           +DERV VMERTN RY        G+P   +  T+D+SFIS+ L++P +  ++   S  + 
Sbjct: 124 QDERVVVMERTNFRYATPADFTKGMP---EFATIDVSFISLRLILPVLRTLLVPGSDCMA 183

Query: 228 LVKPQFECRRSQVGGGGIVRDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEF 284
           LVKPQFE  R  VG  GIVRDP+VH +VL+++I      G+  KG   SP+ G +GN EF
Sbjct: 184 LVKPQFEAGRESVGKKGIVRDPKVHADVLKRMISFSAAEGYICKGLSFSPITGGDGNIEF 242

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy Swiss-Prot
Match: P9WJ62 (16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=tlyA PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-39
Identity = 97/241 (40.25%), Postives = 135/241 (56.02%), Query Frame = 0


Query: 46  LKKKRRLDEVCVERYQQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPK 105
           + ++ R+D   V R    SR      I  GKV +DG    K  T V+D   + ++ +  +
Sbjct: 1   MARRARVDAELVRRGLARSRQQAAELIGAGKVRIDGLPAVKPATAVSDTTALTVVTDSER 60

Query: 106 -YVCRAGLKLEAAIEQLDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVAD 165
            +V R   KL  A+E   + V G+  LDAG STGGFT+ LL  GA+ V   DVGYGQ+A 
Sbjct: 61  AWVSRGAHKLVGALEAFAIAVAGRRCLDAGASTGGFTEVLLDRGAAHVVAADVGYGQLAW 120

Query: 166 KIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTL 225
            +R D RV V+ERTN R L    +  +VD+V  DLSFIS+  V+PA++      + IV L
Sbjct: 121 SLRNDPRVVVLERTNARGLTPEAIGGRVDLVVADLSFISLATVLPALVGCASRDADIVPL 180

Query: 226 VKPQFECRRSQVGGGGIVRDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFL 284
           VKPQFE  + QVG GG+V DPQ+    +  + +  +  G+ S G   SPL G  GN E+ 
Sbjct: 181 VKPQFEVGKGQVGPGGVVHDPQLRARSVLAVARRAQELGWHSVGVKASPLPGPSGNVEYF 240

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy Swiss-Prot
Match: P9WJ63 (16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=tlyA PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-39
Identity = 97/241 (40.25%), Postives = 135/241 (56.02%), Query Frame = 0


Query: 46  LKKKRRLDEVCVERYQQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPK 105
           + ++ R+D   V R    SR      I  GKV +DG    K  T V+D   + ++ +  +
Sbjct: 1   MARRARVDAELVRRGLARSRQQAAELIGAGKVRIDGLPAVKPATAVSDTTALTVVTDSER 60

Query: 106 -YVCRAGLKLEAAIEQLDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVAD 165
            +V R   KL  A+E   + V G+  LDAG STGGFT+ LL  GA+ V   DVGYGQ+A 
Sbjct: 61  AWVSRGAHKLVGALEAFAIAVAGRRCLDAGASTGGFTEVLLDRGAAHVVAADVGYGQLAW 120

Query: 166 KIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTL 225
            +R D RV V+ERTN R L    +  +VD+V  DLSFIS+  V+PA++      + IV L
Sbjct: 121 SLRNDPRVVVLERTNARGLTPEAIGGRVDLVVADLSFISLATVLPALVGCASRDADIVPL 180

Query: 226 VKPQFECRRSQVGGGGIVRDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFL 284
           VKPQFE  + QVG GG+V DPQ+    +  + +  +  G+ S G   SPL G  GN E+ 
Sbjct: 181 VKPQFEVGKGQVGPGGVVHDPQLRARSVLAVARRAQELGWHSVGVKASPLPGPSGNVEYF 240

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy Swiss-Prot
Match: Q06803 (Hemolysin A OS=Brachyspira hyodysenteriae OX=159 GN=tlyA PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-38
Identity = 92/238 (38.66%), Postives = 131/238 (55.04%), Query Frame = 0


Query: 51  RLDEVCVERYQQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRA 110
           RLDE         SR+  Q  IL G V V+G  ++     + D   +E++  + KYV RA
Sbjct: 2   RLDEYVHSEGYTESRSKAQDIILAGCVFVNGVKVTSKAHKIKDTDNIEVVQNI-KYVSRA 61

Query: 111 GLKLEAAIEQLDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDE 170
           G KLE A  +  + V+ K+ LD G STGGFTDCLL+HGA  VY +DVG+ Q+  K+R D 
Sbjct: 62  GEKLEKAFVEFGISVENKICLDIGASTGGFTDCLLKHGAKKVYALDVGHNQLVYKLRNDN 121

Query: 171 RVCVMERTNLRYL---AGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQF 230
           RV  +E  N + +       +   ++  D+SFISI  + P +   +      VTL+KPQF
Sbjct: 122 RVVSIEDFNAKDINKEMFNDEIPSVIVSDVSFISITKIAPIIFKELNNLEFWVTLIKPQF 181

Query: 231 ECRRSQVGGGGIVRDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCF 286
           E  R  V  GGI+RD  + +++L   I  + + GF       SP+KGA+GN E+L  F
Sbjct: 182 EAERGDVSKGGIIRDDILREKILNNAISKIIDCGFKEVNRTISPIKGAKGNIEYLAHF 238

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy Swiss-Prot
Match: Q8DEV0 (Ribosomal large subunit pseudouridine synthase D OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=rluD PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.8e-05
Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 50  RRLDEVCVERYQQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVC- 109
           +RLD+   E +  FSR+ ++ W+L GKV VDG V++K  T V     + ++AE+   V  
Sbjct: 18  QRLDQAIAELFADFSRSRLKEWLLDGKVTVDGNVVTKPRTKVMGGEVITVLAELEDEVRW 77

Query: 110 -RAGLKLEAAIEQLDVDVDGK-----VALDAGLSTGGFTDCLLQH 148
               + L+   E  D+ V  K     V   AG   G   + LL H
Sbjct: 78  EAQDIPLDIVYEDDDILVINKPRDFVVHPGAGTPDGTVLNALLFH 122

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy TrEMBL
Match: A0A0A0KA33 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368230 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 2.4e-162
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY
Sbjct: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy TrEMBL
Match: A0A5D3BCA3 (Putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00050 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.1e-159
Identity = 290/296 (97.97%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KCLLSRNNCARI LFSP S+SPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY
Sbjct: 1   MSKCLLSRNNCARILLFSPPSTSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LDVDV+GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVNGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGGGGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy TrEMBL
Match: A0A1S3C7N4 (putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497628 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.1e-159
Identity = 290/296 (97.97%), Postives = 293/296 (98.99%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KCLLSRNNCARI LFSP S+SPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY
Sbjct: 1   MSKCLLSRNNCARILLFSPPSTSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LDVDV+GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVNGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGGGGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy TrEMBL
Match: A0A6J1KR87 (uncharacterized protein LOC111497556 OS=Cucurbita maxima OX=3661 GN=LOC111497556 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.3e-146
Identity = 267/296 (90.20%), Postives = 281/296 (94.93%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KCLLSRNN ARIFL SP +   IHS SPKAFSVAKSGKIQSL LKKK+RLDE+CVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPNCCRIHSASPKAFSVAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQ+SRT+IQSWILQGKVLVDGKV+SKAGTPV DKAKVEIIAEVPKYVCRAG KLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           R+LAG+PQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGG G+V
Sbjct: 181 RHLAGVPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGVV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 297
           RDPQVHQEVLEKIIKGVE+FGFCSKGWIESPLKGAEGNTEFLVCF RTT+S +NQ+
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296

[Close]

BLAST of CsaV3_7G026730 vs. ExPASy TrEMBL
Match: A0A6J1H982 (uncharacterized protein LOC111461240 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461240 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 270/297 (90.91%), Postives = 281/297 (94.61%), Query Frame = 0


Query: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60
           M KCLLSRNN ARIFL SP +   IHS SPKAFSVAKSGKIQSL LKKK+RLDE+CVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120
           QQ+SRT+IQSWILQGKVLVDGKV+SKAGTPV DKAKVEIIAEVPKYVCRAG KLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGG GIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240

Query: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDR-TTVSTSNQE 297
           RDPQVHQEVLEKIIKGVE+FGFCSKGWIESPLKGAEGNTEFLVCF R TT+S +NQ+
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTTLSAANQD 297

[Close]

BLAST of CsaV3_7G026730 vs. TAIR 10
Match: AT3G25470.1 (bacterial hemolysin-related )

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-104
Identity = 188/266 (70.68%), Postives = 223/266 (83.83%), Query Frame = 0


Query: 31  KAFSVAKSGKIQSLTLKKKRRLDEVCVERYQQFSRTMIQSWILQGKVLVDGKVISKAGTP 90
           + F+ A  GK       KK+RLDE CVER+ ++SRT+IQSWI+QGKVLVDG+ + KAG P
Sbjct: 42  RCFASATRGK------NKKQRLDEACVERFNEYSRTLIQSWIMQGKVLVDGRRVIKAGMP 101

Query: 91  VADKAKVEIIAEVPKYVCRAGLKLEAAIEQLDVDVDGKVALDAGLSTGGFTDCLLQHGAS 150
           V+  A ++I AEVPK+VCR GLKLEAA+E+LDVDV  KV LDAGLSTGGFTDCLL++GA+
Sbjct: 102 VSTTAAIKITAEVPKFVCRGGLKLEAALEKLDVDVSEKVVLDAGLSTGGFTDCLLRYGAA 161

Query: 151 FVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFISILLVMPAVI 210
            VYGVDVGYGQVADKIR D++V V+ERTNLRYL GLPQKVD+VTLDLSFISIL VMPA++
Sbjct: 162 HVYGVDVGYGQVADKIRNDKKVTVIERTNLRYLPGLPQKVDVVTLDLSFISILKVMPAIM 221

Query: 211 NVMKETSTIVTLVKPQFECRRSQVGGGGIVRDPQVHQEVLEKIIKGVENFGFCSKGWIES 270
           NVMKE +T+VTLVKPQFE RR QVG GGIVRDP+VHQEVLEKII GVE +GF +KG+IES
Sbjct: 222 NVMKEDATLVTLVKPQFEARRQQVGKGGIVRDPEVHQEVLEKIINGVERYGFTNKGFIES 281

Query: 271 PLKGAEGNTEFLVCFDRTTVSTSNQE 297
           P+KGA+GN EFL CF+R TV    +E
Sbjct: 282 PIKGADGNIEFLACFNRGTVKPEAEE 301

The following BLAST results are available for this feature:

BLAST of CsaV3_7G026730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149317.1	4.9e-162	100.00	uncharacterized protein LOC101212823 [Cucumis sativus] >KGN44671.1 hypothetical ...	[more]
XP_008458092.1	1.5e-158	97.97	PREDICTED: putative rRNA methyltransferase YqxC isoform X1 [Cucumis melo] >KAA00...	[more]
XP_038899562.1	7.6e-155	95.95	putative rRNA methyltransferase YqxC [Benincasa hispida]	[more]
XP_023513431.1	8.4e-146	90.54	uncharacterized protein LOC111778052 [Cucurbita pepo subsp. pepo]	[more]
XP_023004131.1	1.1e-145	90.20	uncharacterized protein LOC111497556 [Cucurbita maxima]	[more]

BLAST of CsaV3_7G026730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19672	6.7e-45	43.39	Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) OX=224308...	[more]
P9WJ62	1.1e-39	40.25	16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosi...	[more]
P9WJ63	1.1e-39	40.25	16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosi...	[more]
Q06803	1.2e-38	38.66	Hemolysin A OS=Brachyspira hyodysenteriae OX=159 GN=tlyA PE=2 SV=1	[more]
Q8DEV0	8.8e-05	32.38	Ribosomal large subunit pseudouridine synthase D OS=Vibrio vulnificus (strain CM...	[more]

BLAST of CsaV3_7G026730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA33	2.4e-162	100.00	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368...	[more]
A0A5D3BCA3	7.1e-159	97.97	Putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C7N4	7.1e-159	97.97	putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KR87	5.3e-146	90.20	uncharacterized protein LOC111497556 OS=Cucurbita maxima OX=3661 GN=LOC111497556...	[more]
A0A6J1H982	1.2e-145	90.91	uncharacterized protein LOC111461240 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_7G026730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25470.1	1.7e-104	70.68	bacterial hemolysin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 50..115 e-value: 3.1E-9 score: 46.7
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 50..92 e-value: 7.4E-9 score: 35.2
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 50..99 e-value: 2.07543E-8 score: 48.3998
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 109..296 e-value: 2.5E-73 score: 247.7
None	No IPR available	PANTHER	PTHR32319	BACTERIAL HEMOLYSIN-LIKE PROTEIN	coord: 46..292
None	No IPR available	PROSITE	PS50889	S4	coord: 50..110 score: 12.818749
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 48..102
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 45..105 e-value: 2.4E-16 score: 61.0
IPR004538	Haemolysin A /rRNA methyltransferase TlyA	TIGRFAM	TIGR00478	TIGR00478	coord: 51..280 e-value: 4.5E-67 score: 223.6
IPR004538	Haemolysin A /rRNA methyltransferase TlyA	PIRSF	PIRSF005578	TlyA	coord: 45..296 e-value: 8.8E-100 score: 330.9
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 106..286 e-value: 7.4E-20 score: 71.8
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 106..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G026730.1	CsaV3_7G026730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding