CsaV3_7G026260 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAAATTCTAGATGAAGAGCAAATTCTACCTCTTCAAGGGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCAATGAGTGCAGATCAATATGCCATGGATTTAGGGTTTACCACAGTAACCCGATCCAGAGCAAGATCATCTCGCATACAGATTGGATCTCCCACGAAGTCATCAACTCCACCAAGGACTTCGGCCAATCTCATTCGTCCTTCAAGTGAAGTCGTTCAGATGAGGCCTCTTGCCTCTCCTTTATCTAATAGGGAGTCTTCTACTCCTCCTACTACTTATTCTCAAGTTATCACTCCTGATAAAAGATTTGTACCTAGACTCGAAATCAAATCTTATTTTCAAAAACCAGTCATTGTTTATGATTCTATCATAGAACCCGAATATCAAAGTCTCACTCTAGAAGAGACAGTGTCAAAGATTTTTCCTGATAACTTTAATTTCCTTCCTGATGACCTCATAAAAATGAGAAACTTTTATAAGTTCATCTTAGTTGACACCAAATCTGTTAAAATAACACATATCATAGACAAAAACAATTCTTCAAAGATTGCTTATTCAAAACTAAAGATTTTTAAAGCAATCAATCCAACTCATTGGAACCAAGGAATTTTTATAGAAAAATCTTTTTCAAAGCCTTTTGTTCCTCAATCTTACTCTTATCAGGATTACATCAAAGTCTTGTATAGAGTATTTTGGTTTTCCAACAGGAATCATTCTTAGTTCATTTCCTTTTGTCAAAACGGATATAAAATCAACTTTCCTTTTTGGTTTATTCAATGGTGGAATAATTTTGGTCTCACATATGGTATTCTACTAACACCCATTCAAGAATCTTATTTTTATTTTTCGAGGACAATTCAAAAGAATTCATTCCACAATTCAATGAGATTATGCCTTTACTTTCAAATTTCATGGATATTTTGTTGGAGTTTCAATTCAATTTCATATCCTTAACACAAAATTCTGATTAAAAACCTCAAGATCAAATGGTGGGAAAAATACAATTTTCAGCATGCCACAATCAAGCATATGAAATAATGGTTCGCAGAGAACGATTATCTCCAAGACATTGATCAAAGGAAGAACACTGAATTTTTAAACGACAAAATCAAAACTTCTTGCAGCACTCGTCCAAGCCACAACTGATGCAGATTTCCAAAGGTAAATATCAACAGCAGTAAATGCATCTTCATCTTCAAAGTCAGCATCTTCCTCCATACAGGAAGACGAAGTTCAAGCAGAACTAGAATATGACCTTGACGATCCATATCTCAACTCGCAGCCTATGTGAGCTCTGACGACATATACCTATTTCAAAAAGAAAGTAGGATCCACGAAAAGTCTTCACAAACAAGACTTCTTTCCGGTTTACTATTAATGCAATTTACTTTTCTTGTAAAAAAAAACGTGAATTCTCATCTCTAAAGTAATTTGTGAGTAAACTCTGTAAGTATTCCAGTTTACTCTTATATATATTGTTCTGTCATCCAGAAATCCAGAAGAAAAATTGAAGACGACGGGCGCAATTAAAAATCAAGTCCAAGGTTAAATTCAAATTGTGTATTTCATAAAGTGTTCGACTACGTTTGATGGTCGCAACCGTAAGTCGTAAAAAGATGAAGTGCGGTGAGCCTGTGGTCAATCAATAACCCGTCGTAG AGAGCAAATTCTACCTCTTCAAGGGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCAATGAGTGCAGATCAATATGCCATGGATTTAGGGTTTACCACAGTAACCCGATCCAGAGCAAGATCATCTCGCATACAGATTGGATCTCCCACGAAGTCATCAACTCCACCAAGGACTTCGGCCAATCTCATTCGTCCTTCAAGTGAAGTCGTTCAGATGAGGCCTCTTGCCTCTCCTTTATCTAATAGGGAGTCTTCTACTCCTCCTACTACTTATTCTCAAGTTATCACTCCTGATAAAAGATTTGTACCTAGACTCGAAATCAAATCTTATTTTCAAAAACCAGTCATTGTTTATGATTCTATCATAGAACCCGAATATCAAAGTCTCACTCTAGAAGAGACAGTGTCAAAGATTTTTCCTGATAACTTTAATTTCCTTCCTGATGACCTCCCTGTGGTCAATCAATA AGAGCAAATTCTACCTCTTCAAGGGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCAATGAGTGCAGATCAATATGCCATGGATTTAGGGTTTACCACAGTAACCCGATCCAGAGCAAGATCATCTCGCATACAGATTGGATCTCCCACGAAGTCATCAACTCCACCAAGGACTTCGGCCAATCTCATTCGTCCTTCAAGTGAAGTCGTTCAGATGAGGCCTCTTGCCTCTCCTTTATCTAATAGGGAGTCTTCTACTCCTCCTACTACTTATTCTCAAGTTATCACTCCTGATAAAAGATTTGTACCTAGACTCGAAATCAAATCTTATTTTCAAAAACCAGTCATTGTTTATGATTCTATCATAGAACCCGAATATCAAAGTCTCACTCTAGAAGAGACAGTGTCAAAGATTTTTCCTGATAACTTTAATTTCCTTCCTGATGACCTCCCTGTGGTCAATCAATA RANSTSSRGNRPSSSSNSAPSPMSADQYAMDLGFTTVTRSRARSSRIQIGSPTKSSTPPRTSANLIRPSSEVVQMRPLASPLSNRESSTPPTTYSQVITPDKRFVPRLEIKSYFQKPVIVYDSIIEPEYQSLTLEETVSKIFPDNFNFLPDDLPVVNQX Homology
BLAST of CsaV3_7G026260 vs. NCBI nr
Match: KAE8646253.1 (hypothetical protein Csa_023844, partial [Cucumis sativus]) HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 231.1 bits (588), Expect = 6.7e-57 Identity = 125/153 (81.70%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. NCBI nr
Match: ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55 Identity = 122/153 (79.74%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. NCBI nr
Match: KAA0026217.1 (hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK30739.1 hypothetical protein E5676_scaffold343G00750 [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54 Identity = 120/153 (78.43%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. NCBI nr
Match: KAA0066421.1 (hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK00863.1 hypothetical protein E5676_scaffold602G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 203.0 bits (515), Expect = 1.9e-48 Identity = 106/131 (80.92%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 3.2e-57 Identity = 125/153 (81.70%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. ExPASy TrEMBL
Match: E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 7.9e-56 Identity = 122/153 (79.74%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. ExPASy TrEMBL
Match: A0A5D3E4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00750 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54 Identity = 120/153 (78.43%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. ExPASy TrEMBL
Match: A0A5D3BM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00180 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 9.4e-49 Identity = 106/131 (80.92%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CsaV3_7G026260 vs. ExPASy TrEMBL
Match: A0A5A7UFZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1248G00100 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 8.8e-47 Identity = 107/145 (73.79%), Postives = 123/145 (84.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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