CsaV3_7G025930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G025930
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 15420043 .. 15420378 (+)
RNA-Seq ExpressionCsaV3_7G025930
SyntenyCsaV3_7G025930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTCTCGACACCGTACTAATGGTGCACAAGTCTTAAGTTCCTCTCCCAATGTGGTTTTCCTGGCCATGCCCCCAACGACCAGTTAGTAGTCGACATAACTATTTCCAACACGTTTTGGTATATAATCGGATGAATCTATGCATCCAGAGATCCCCAAATTTTTGTATTATAATACTGATGTCACCTTTCACCCAGACCTTTCTTTTGTTGGGCTTGGTGCTGCTACGTGGGATGCTGGAGGACTGTTGATTGCTGCCTTGGCTCAAGTGCATCATGGGTCTTTCCCGACTGAAGGGGGAGAGCTTTGGGCTTGGTGCTGCTATGCGGGATGA

mRNA sequence

ATGCATTCTCGACACCGTACTAATGGTGCACAAGTCTTAAGTTCCTCTCCCAATGTGGTTTTCCTGGCCATGCCCCCAACGACCAACCTTTCTTTTGTTGGGCTTGGTGCTGCTACGTGGGATGCTGGAGGACTGTTGATTGCTGCCTTGGCTCAAGTGCATCATGGGTCTTTCCCGACTGAAGGGGGAGAGCTTTGGGCTTGGTGCTGCTATGCGGGATGA

Coding sequence (CDS)

ATGCATTCTCGACACCGTACTAATGGTGCACAAGTCTTAAGTTCCTCTCCCAATGTGGTTTTCCTGGCCATGCCCCCAACGACCAACCTTTCTTTTGTTGGGCTTGGTGCTGCTACGTGGGATGCTGGAGGACTGTTGATTGCTGCCTTGGCTCAAGTGCATCATGGGTCTTTCCCGACTGAAGGGGGAGAGCTTTGGGCTTGGTGCTGCTATGCGGGATGA

Protein sequence

MHSRHRTNGAQVLSSSPNVVFLAMPPTTNLSFVGLGAATWDAGGLLIAALAQVHHGSFPTEGGELWAWCCYAG*
Homology
[Close]
BLAST of CsaV3_7G025930 vs. NCBI nr
Match: KGN44592.1 (hypothetical protein Csa_015614 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 3.3e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MHSRHRTNGAQVLSSSPNVVFLAMPPTTNLSFVGLGAATWDAGGLLIAALAQVHHGSFPT 60
          MHSRHRTNGAQVLSSSPNVVFLAMPPTTNLSFVGLGAATWDAGGLLIAALAQVHHGSFPT
Sbjct: 1  MHSRHRTNGAQVLSSSPNVVFLAMPPTTNLSFVGLGAATWDAGGLLIAALAQVHHGSFPT 60

Query: 61 EGGELWAWCCYAG 74
          EGGELWAWCCYAG
Sbjct: 61 EGGELWAWCCYAG 73

[Close]
BLAST of CsaV3_7G025930 vs. ExPASy TrEMBL
Match: A0A0A0K8B6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G339640 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MHSRHRTNGAQVLSSSPNVVFLAMPPTTNLSFVGLGAATWDAGGLLIAALAQVHHGSFPT 60
          MHSRHRTNGAQVLSSSPNVVFLAMPPTTNLSFVGLGAATWDAGGLLIAALAQVHHGSFPT
Sbjct: 1  MHSRHRTNGAQVLSSSPNVVFLAMPPTTNLSFVGLGAATWDAGGLLIAALAQVHHGSFPT 60

Query: 61 EGGELWAWCCYAG 74
          EGGELWAWCCYAG
Sbjct: 61 EGGELWAWCCYAG 73

The following BLAST results are available for this feature:
BLAST of CsaV3_7G025930 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44592.13.3e-35100.00hypothetical protein Csa_015614 [Cucumis sativus][more]
BLAST of CsaV3_7G025930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G025930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8B61.6e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G339640 PE=4 SV=1[more]
BLAST of CsaV3_7G025930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G025930.1CsaV3_7G025930.1mRNA