CsaV3_7G025850 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G025850
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 15297805 .. 15298005 (-)
RNA-Seq ExpressionCsaV3_7G025850
SyntenyCsaV3_7G025850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCATTTGCCGCCGCAACGTCAAGCCAAGGTCCATCGACGCTGCGTCGGTATTTACTTTATGTCGGGTGTAGAAGACAACATCAGCAATACCCTATTGTTGATGCTTTGACCAGACGTCGGACAAAGCTTTTCTCCGACATCTTTTTCCTGTCGGCAAAGCATGCGTCGAGCAAAATCTTTTGCCGACATCGTTGA

mRNA sequence

ATGGATGCATTTGCCGCCGCAACGTCAAGCCAAGGTCCATCGACGCTGCGTCGGTATTTACTTTATGTCGGGTGTAGAAGACAACATCAGCAATACCCTATTGTTGATGCTTTGACCAGACGTCGGACAAAGCTTTTCTCCGACATCTTTTTCCTGTCGGCAAAGCATGCGTCGAGCAAAATCTTTTGCCGACATCGTTGA

Coding sequence (CDS)

ATGGATGCATTTGCCGCCGCAACGTCAAGCCAAGGTCCATCGACGCTGCGTCGGTATTTACTTTATGTCGGGTGTAGAAGACAACATCAGCAATACCCTATTGTTGATGCTTTGACCAGACGTCGGACAAAGCTTTTCTCCGACATCTTTTTCCTGTCGGCAAAGCATGCGTCGAGCAAAATCTTTTGCCGACATCGTTGA

Protein sequence

MDAFAAATSSQGPSTLRRYLLYVGCRRQHQQYPIVDALTRRRTKLFSDIFFLSAKHASSKIFCRHR*
Homology
[Close]
BLAST of CsaV3_7G025850 vs. NCBI nr
Match: KGN44586.1 (hypothetical protein Csa_016431 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 9.4e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MDAFAAATSSQGPSTLRRYLLYVGCRRQHQQYPIVDALTRRRTKLFSDIFFLSAKHASSK 60
          MDAFAAATSSQGPSTLRRYLLYVGCRRQHQQYPIVDALTRRRTKLFSDIFFLSAKHASSK
Sbjct: 1  MDAFAAATSSQGPSTLRRYLLYVGCRRQHQQYPIVDALTRRRTKLFSDIFFLSAKHASSK 60

Query: 61 IFCRHR 67
          IFCRHR
Sbjct: 61 IFCRHR 66

[Close]
BLAST of CsaV3_7G025850 vs. ExPASy TrEMBL
Match: A0A0A0K9V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G338110 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MDAFAAATSSQGPSTLRRYLLYVGCRRQHQQYPIVDALTRRRTKLFSDIFFLSAKHASSK 60
          MDAFAAATSSQGPSTLRRYLLYVGCRRQHQQYPIVDALTRRRTKLFSDIFFLSAKHASSK
Sbjct: 1  MDAFAAATSSQGPSTLRRYLLYVGCRRQHQQYPIVDALTRRRTKLFSDIFFLSAKHASSK 60

Query: 61 IFCRHR 67
          IFCRHR
Sbjct: 61 IFCRHR 66

The following BLAST results are available for this feature:
BLAST of CsaV3_7G025850 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44586.19.4e-29100.00hypothetical protein Csa_016431 [Cucumis sativus][more]
BLAST of CsaV3_7G025850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G025850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9V64.6e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G338110 PE=4 SV=1[more]
BLAST of CsaV3_7G025850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G025850.1CsaV3_7G025850.1mRNA