CsaV3_7G025710 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G025710
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 15177705 .. 15178639 (-)
RNA-Seq ExpressionCsaV3_7G025710
SyntenyCsaV3_7G025710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCATATAAGGGAACTGACGCCCTCCACCGTATCCCGCTGCAAAACCTTGCGGTTGCGGCGGTGGCAGAGGGGGGCCCGTCGCAAAATTATCAACATACGAATTGAAATGCGATGGGGGTAGCCCAAACTGTCCCGAAAAATTATTATTATTATTACCACTACTACTATTACTCCAGGACAAGGAGGAATCAAGTAACTGACCATAATGATCGGAAAAACCCCGTCCAGCACCATACGCATCTCCACCCGTTGCCGGAACATACCCAATCATCGATGGAGAATACAAAGGTGGAGGCGGTAACGGGGATGGGGTTTGGATCCAAGGGAGGTTGGATGAGGAATTAGGGTTGTTTTGAAACCCTAAGAAATGGGCATCAGTTTCAACAGTGAGGTCTCTGAATTTCCTCTTGTGGAGATGATTTGTTTGAACCCATTGAAGAACAAGCTTCAAAAGCTGCTTCATTCCTTCCTTGCCGCCGCCGAGACGGCGGGCGGCGCTTTCGATTGTGGCCTTTTTAATCCTAACATTTCTCAAATCATCAGCAGAAACCGTTTCTCTATTACTCCTCAACCACTCCAAAAACACTTTAGCCATATCTTCCTCCTCAACGACATCGTTTTCTAATTTCTCCACATTAATATTATTATTACTATTATCCTTACTCTCATCACCGCCATGCATCATCATCAAATCCTCCATTTCAACTTCTTCAAATCTCTCCAATTGCAAATCCTCTAAATTACCCTCTTGATCTTCTTCTTCTACAACTACAACTTTTTCTTCTTGTTGTTCTTGTTGTTCTTCGTTCTGGAATATACACGATGGGTCGAAAAACTCATTACTATCTTCGAGTAAATCCATGTACCCAAAACTCTCCATCATCATCTCGTCCGTACAATCGAACCCGTTCTCTGCTACCGGCGATGATAATTT

mRNA sequence

ATGGGCATCAGTTTCAACAGTGAGGTCTCTGAATTTCCTCTTGTGGAGATGATTTGTTTGAACCCATTGAAGAACAAGCTTCAAAAGCTGCTTCATTCCTTCCTTGCCGCCGCCGAGACGGCGGGCGGCGCTTTCGATTGTGGCCTTTTTAATCCTAACATTTCTCAAATCATCAGCAGAAACCGTTTCTCTATTACTCCTCAACCACTCCAAAAACACTTTAGCCATATCTTCCTCCTCAACGACATCGTTTTCTAA

Coding sequence (CDS)

ATGGGCATCAGTTTCAACAGTGAGGTCTCTGAATTTCCTCTTGTGGAGATGATTTGTTTGAACCCATTGAAGAACAAGCTTCAAAAGCTGCTTCATTCCTTCCTTGCCGCCGCCGAGACGGCGGGCGGCGCTTTCGATTGTGGCCTTTTTAATCCTAACATTTCTCAAATCATCAGCAGAAACCGTTTCTCTATTACTCCTCAACCACTCCAAAAACACTTTAGCCATATCTTCCTCCTCAACGACATCGTTTTCTAA

Protein sequence

MGISFNSEVSEFPLVEMICLNPLKNKLQKLLHSFLAAAETAGGAFDCGLFNPNISQIISRNRFSITPQPLQKHFSHIFLLNDIVF*
Homology
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BLAST of CsaV3_7G025710 vs. NCBI nr
Match: KAE8646239.1 (hypothetical protein Csa_016102 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MGISFNSEVSEFPLVEMICLNPLKNKLQKLLHSFLAAAETAGGAFDCGLFNPNISQIISR 60
          MGISFNSEVSEFPLVEMICLNPLKNKLQKLLHSFLAAAETAGGAFDCGLFNPNISQIISR
Sbjct: 1  MGISFNSEVSEFPLVEMICLNPLKNKLQKLLHSFLAAAETAGGAFDCGLFNPNISQIISR 60

Query: 61 NRFSITPQPLQKHFSHIFLLNDIVF 86
          NRFSITPQPLQKHFSHIFLLNDIVF
Sbjct: 61 NRFSITPQPLQKHFSHIFLLNDIVF 85

The following BLAST results are available for this feature:
BLAST of CsaV3_7G025710 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646239.11.8e-40100.00hypothetical protein Csa_016102 [Cucumis sativus][more]
BLAST of CsaV3_7G025710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G025710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G025710 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G025710.1CsaV3_7G025710.1mRNA