CsaV3_7G025690 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G025690
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 15144315 .. 15144641 (-)
RNA-Seq ExpressionCsaV3_7G025690
SyntenyCsaV3_7G025690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAAATTAAATTATCAAAATAAAAAAAAAGATGGTGAAACCTTTCCCAACGCACATACCACATTGCGAATAGTGTCATCTTACGATGCGAGATCACCCAAAGCTGTGTCGATGTTGCATTGGCTCTTCCTACAACGACGCACACCAGGACGTCGACTTGGAGTTATTTTCGATGCTCTGACTCAACATTGGCAAACGGTTTTGGCCGATGTGTTGACCTTCTTACGACACCGTTGCCGAGTTATTTTCGTGGTAGCCTTCACCGACACACAATGGTTTTCTAGCGACGCTCGACTGCGTCGCCAGAACCTTGGATTCTTGTAG

mRNA sequence

ATGTTAAAATTAAATTATCAAAATAAAAAAAAAGATGGTGAAACCTTTCCCAACGCACATACCACATTGCGAATAGTGTCATCTTACGATGCGAGATCACCCAAAGCTGTGTCGATGTTGCATTGGCTCTTCCTACAACGACGCACACCAGGACGTCGACTTGGAGTTATTTTCGATGCTCTGACTCAACATTGGCAAACGGTTTTGGCCGATGTGTTGACCTTCTTACGACACCGTTGCCGAGTTATTTTCGTGGTAGCCTTCACCGACACACAATGGTTTTCTAGCGACGCTCGACTGCGTCGCCAGAACCTTGGATTCTTGTAG

Coding sequence (CDS)

ATGTTAAAATTAAATTATCAAAATAAAAAAAAAGATGGTGAAACCTTTCCCAACGCACATACCACATTGCGAATAGTGTCATCTTACGATGCGAGATCACCCAAAGCTGTGTCGATGTTGCATTGGCTCTTCCTACAACGACGCACACCAGGACGTCGACTTGGAGTTATTTTCGATGCTCTGACTCAACATTGGCAAACGGTTTTGGCCGATGTGTTGACCTTCTTACGACACCGTTGCCGAGTTATTTTCGTGGTAGCCTTCACCGACACACAATGGTTTTCTAGCGACGCTCGACTGCGTCGCCAGAACCTTGGATTCTTGTAG

Protein sequence

MLKLNYQNKKKDGETFPNAHTTLRIVSSYDARSPKAVSMLHWLFLQRRTPGRRLGVIFDALTQHWQTVLADVLTFLRHRCRVIFVVAFTDTQWFSSDARLRRQNLGFL*
Homology
[Close]
BLAST of CsaV3_7G025690 vs. NCBI nr
Match: KGN44570.1 (hypothetical protein Csa_016747 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MLKLNYQNKKKDGETFPNAHTTLRIVSSYDARSPKAVSMLHWLFLQRRTPGRRLGVIFDA 60
           MLKLNYQNKKKDGETFPNAHTTLRIVSSYDARSPKAVSMLHWLFLQRRTPGRRLGVIFDA
Sbjct: 1   MLKLNYQNKKKDGETFPNAHTTLRIVSSYDARSPKAVSMLHWLFLQRRTPGRRLGVIFDA 60

Query: 61  LTQHWQTVLADVLTFLRHRCRVIFVVAFTDTQWFSSDARLRRQNLGFL 109
           LTQHWQTVLADVLTFLRHRCRVIFVVAFTDTQWFSSDARLRRQNLGFL
Sbjct: 61  LTQHWQTVLADVLTFLRHRCRVIFVVAFTDTQWFSSDARLRRQNLGFL 108

[Close]
BLAST of CsaV3_7G025690 vs. ExPASy TrEMBL
Match: A0A0A0K4H4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336490 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.3e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MLKLNYQNKKKDGETFPNAHTTLRIVSSYDARSPKAVSMLHWLFLQRRTPGRRLGVIFDA 60
           MLKLNYQNKKKDGETFPNAHTTLRIVSSYDARSPKAVSMLHWLFLQRRTPGRRLGVIFDA
Sbjct: 1   MLKLNYQNKKKDGETFPNAHTTLRIVSSYDARSPKAVSMLHWLFLQRRTPGRRLGVIFDA 60

Query: 61  LTQHWQTVLADVLTFLRHRCRVIFVVAFTDTQWFSSDARLRRQNLGFL 109
           LTQHWQTVLADVLTFLRHRCRVIFVVAFTDTQWFSSDARLRRQNLGFL
Sbjct: 61  LTQHWQTVLADVLTFLRHRCRVIFVVAFTDTQWFSSDARLRRQNLGFL 108

The following BLAST results are available for this feature:
BLAST of CsaV3_7G025690 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44570.11.9e-55100.00hypothetical protein Csa_016747 [Cucumis sativus][more]
BLAST of CsaV3_7G025690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G025690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4H49.3e-56100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336490 PE=4 SV=1[more]
BLAST of CsaV3_7G025690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G025690.1CsaV3_7G025690.1mRNA