CsaV3_7G025090 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATTATCTCTTGGAACGTTCAAGGTATTGGCTCGTGGAAAATGAGAGCCTTGATTACGCGTTTAATTAAACACAACCCAGATTTTTTTCTTTTGCAGGAAACAAATCTAGATGACATTGACTCACTTATGATTAAATCCATATGGAGCTCCTATTTTATTGGTTGAGCAGCACTGGACGCTATTGACTCATCTGGAGGCATTATTGTCCTATGGAGTGCACCAGATTTCACTGTTCAGGAGATTATACAGGGTAGATACTGACTCCATTCACACTATTTTGGCTGACAGTTTTTCACTGTGGATTTTGACAGTATATGGACCTTCCGTTCATGGTTACCATGTTGATTAATGGCAAGAGATTTATGATTTGGCTGGTGTGGGCACTGACTCTTGGATCCTTGGTGGTGGTTTTATTGTAACCCGCACCATGACCATTCCATCTCTCCTGGTATGCGTTCTTTCAACCAATGGATCAATGACTACAAGTTGAAAGACATTCCTATGAATAATAGCCATTTCATATGGTCCGGTGAAAGTCAATCCCAATACTCCTTGCTATTTTGACAGGTTGCATTTGACAAATTAGACCACGTTACCTCTGATTACTATTCTCTGGCTCGTGTCGGGTAACATTGAATGGGGCCCTTATTCTTTTCATTTTAAAAATTCATGGCTCTAGGTCAATAATCTTCGGCATGTTGTGGAATCTTGGTGGTCTAATACCCGTGTGGCTGGCCATCCCGGACACATTTTAATGATGAAGCTCAAACAACTCAAGTCTTTTATCCGCTCTTGGGCCAATACACAGCAATCGATATCTTCTCAATTAACAAATCTTGTACCTAACCTCCCTAATCTGGACAACTTGATGGATCTTAGTCATCTTACAAATGAGAAACTTACCTCCCAGCATGAGATTAGAGAACAAATTGAGAATTTAACTGCTTAA ATGAAGATTATCTCTTGGAACGTTCAAGCACTGGACGCTATTGACTCATCTGGAGGCATTATTGTCCTATGGAGTGCACCAGATTTCACTGTTCAGGAGATTATACAGGAGATTTATGATTTGGCTGGTGTGGGCACTGACTCTTGGATCCTTGGTGGTGGTTTTATTGTAACCCGCACCATGACCATTCCATCTCTCCTGGTCAATAATCTTCGGCATGTTGTGGAATCTTGGTGGTCTAATACCCGTGTGGCTGGCCATCCCGGACACATTTTAATGATGAAGCTCAAACAACTCAAGTCTTTTATCCGCTCTTGGGCCAATACACAGCAATCGATATCTTCTCAATTAACAAATCTTGTACCTAACCTCCCTAATCTGGACAACTTGATGGATCTTAGTCATCTTACAAATGAGAAACTTACCTCCCAGCATGAGATTAGAGAACAAATTGAGAATTTAACTGCTTAA ATGAAGATTATCTCTTGGAACGTTCAAGCACTGGACGCTATTGACTCATCTGGAGGCATTATTGTCCTATGGAGTGCACCAGATTTCACTGTTCAGGAGATTATACAGGAGATTTATGATTTGGCTGGTGTGGGCACTGACTCTTGGATCCTTGGTGGTGGTTTTATTGTAACCCGCACCATGACCATTCCATCTCTCCTGGTCAATAATCTTCGGCATGTTGTGGAATCTTGGTGGTCTAATACCCGTGTGGCTGGCCATCCCGGACACATTTTAATGATGAAGCTCAAACAACTCAAGTCTTTTATCCGCTCTTGGGCCAATACACAGCAATCGATATCTTCTCAATTAACAAATCTTGTACCTAACCTCCCTAATCTGGACAACTTGATGGATCTTAGTCATCTTACAAATGAGAAACTTACCTCCCAGCATGAGATTAGAGAACAAATTGAGAATTTAACTGCTTAA MKIISWNVQALDAIDSSGGIIVLWSAPDFTVQEIIQEIYDLAGVGTDSWILGGGFIVTRTMTIPSLLVNNLRHVVESWWSNTRVAGHPGHILMMKLKQLKSFIRSWANTQQSISSQLTNLVPNLPNLDNLMDLSHLTNEKLTSQHEIREQIENLTA* Homology
BLAST of CsaV3_7G025090 vs. NCBI nr
Match: KAE8646206.1 (hypothetical protein Csa_016786 [Cucumis sativus]) HSP 1 Score: 314.7 bits (805), Expect = 4.5e-82 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. NCBI nr
Match: KAE8647279.1 (hypothetical protein Csa_002929 [Cucumis sativus]) HSP 1 Score: 85.9 bits (211), Expect = 3.4e-13 Identity = 53/159 (33.33%), Postives = 72/159 (45.28%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. NCBI nr
Match: TYK17996.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 9.3e-11 Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. NCBI nr
Match: TYK17414.1 (hypothetical protein E5676_scaffold434G002760 [Cucumis melo var. makuwa]) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-06 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. NCBI nr
Match: KAE8648339.1 (hypothetical protein Csa_023126 [Cucumis sativus]) HSP 1 Score: 57.0 bits (136), Expect = 1.7e-04 Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. ExPASy TrEMBL
Match: A0A5D3D3Q8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003050 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.5e-11 Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. ExPASy TrEMBL
Match: A0A0A0KDG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G400290 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 5.2e-07 Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. ExPASy TrEMBL
Match: A0A5D3D2A8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002760 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 8.8e-07 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CsaV3_7G025090 vs. ExPASy TrEMBL
Match: A0A0A0KMS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G314840 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 8.2e-05 Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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