CsaV3_7G024340 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G024340
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 13351272 .. 13355729 (-)
RNA-Seq ExpressionCsaV3_7G024340
SyntenyCsaV3_7G024340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAACAGACCCCATTCAAGTGCCCATCACACTAAATGGTTTGTATCATGATTCTGTAATCCACTAATATTTTGAAATTTCACACATTCATGTTTCCAGTCTTCCTTTACTTTCAACAACCACAATGCAGTTGGACTATCAAAGCTCTACACACATGGAAAAGAAAACCTAATGTGACAATTAAAGAACAACACAAGTACTAATGATTGATTCAATAAAGGAGTCTCAATAGAGAAATATAATCCACCTAAGTTTTGTCTATACTAGAAGTTAATAAACCATATACAATTTCGCCTTGAAACTTAAAAGAGATATATTCATTAATAGAAAGATCAAAAATCAAGAAAATGTCTAGTAGTGAGTGTAGTGTAATTTCTTTTAGCAATTTCATTTATGTATCCATCATAGAATAACACGTGACGTTGGACAAGCATGAAACATCTTTTTTTGATAAGGATTAAAAGAGAAATTTAACTACTAGATTGATGGAGGTGTTCAAAGTTTAAAGTTAAGTTTAGATCAGGGTTCCACCAAAATGTAATAAAAAATGAGATAGCTTTTTCTTTTCCCCTCTCATTCAATGGAACCATTAACTTCTCAATTCATGGCTGCCCATTTCTCTCTTATCTAAACAGAGAGAGGGAGAGAGAGAAAAAAAATGGTTGGAGCACAATTCAAAAAGCACTAAGCACTAAAGAAGGAAAGGGCAAAAACAAAAAAAAAAGAAATGAAGAATCTTGATTCTCTCTCCTCTATCCCTCATTTCTGTATGTGTTTGTGCGTACAAAATACCCAATAATATTAATTATAAAGTCCACTCTCAGGGTCTCACTTCATCACAGATCCTACCCTTTCTTCAGCTCTTCGGGAATCTTAAGCTTCCCCTTTCGCCACCCAACGGGAGGGGAATTACAGGTTTTTCTCTCAGATCTTACCCCCCTTTTGACGTTTTGGGCCCTCTCAATTATTACCTCATTTCCCTTTTTCCAATTCTGATTTTGTTTGCTTCGGAGGTTTCTAGGTGGATTTCATGTTCTTTTGTTTTCTGATCCAATTCACCTCTGTTTCTGCTTGTTTCCTTTATCATTGGTCTCTTCTTTCATGTGGGGTTTCTTTATCTACCTCTCTGGATTCTCTTCTCTTTTTCTCTTTTGGGTTTTGTATATTGTGGGTTGTTTTAGAGTGTGATTTATGTTCTTTTATTTCTTTCTGATGAATTTCAGTTTAATTTTGTGTTGATTTGAAATGTTGGAGCAATTGGGATTCGGGAAATTTGTTATGATTTTGCCAATTGCATCCCTTGGTTTTGTTGCTGGACAGGTTTTATCGCTTGGGTTCTTTTGTTTTACATGATTTCATCTCGTGATTGGTTGTTGTGATAATCCTAATTTTAGGCTTTTAGGGGAATGGGAGCTAGGGTTGAGTGGGAGATTGTGTAGTAATTGTTCTCCACCTTTCTGTTTATTTTGTTACGAACTTTCATGTGTATTCTTTTTTAGTTCTTGCAAAATAGCCATTTTAGTTCTTTCTAATTGCTTGTGTATCTTCTTTTTTGTAAAAATTATTTAATGGAAATCTAATGTTGAAATGGTAAACACATATTTTGTCAATTTACTTGGTCAGTGGACTTCTAAAGTGGATAGCGGATAAATGTTTCACAGTTATGCACATATTTGCTTGATCAGTTGATGTCATGTGCTAGTTTTTATTAAACGATTAATGAAAAATTAGGGACAAGAACTAAAGTGAGTTTTTCAATCAAGACATTTGAAAGTTTAGGGACAAAATGAAACCTTAGGGATGGATCAAACAGGACTCAAACCAATCTAACTCTTATTTTTTCCCCTCATCACTTGCTAATATTCATGTGTAAACCTTTTGAGCTCTGTTACCTTGGCCATAAGTGATCTTCAGTGTGTCATATGGTCCTCTTAGTTTTCCTGGTTTACTGCATAGTATATATGTTCTTTTGGCAAATTCCTGGTACATTTTCAAATATGTTCCATTTCATGTACTGAGCTTTCAATGAATTTATGTGCAAGGATATAAGTGGGTATATTTGGCTTAATTTTTGGCCAAAACGTATGCTAACTAATCTAGTGGTTTAAGGAAAATTGAAAACAAATGTCTAAAATGACTTTTTGAAATAATTGAAGTGTCTTGTCTAACTAAACTGATTGAAGCCAACACAACCTAACCAACTTGATTGAAACTAACAATATCGAGCAAAACTGAGCCAACTGATTAATATTGGGTTTTCTATTTTATTAAAATGATTGACTGACACATTGCTCAAACTGACTGATGTAACTTCATTTGGTAAATTGTCTTTTTGTCTTTGTTTTGCTTCGTTTTGTTTTTTGGTTTCTTCATTTGCAGCTTGCTCCACTCCCTAATAACGAATATTACTTTCTCCTTTGACCTTTCAAATTTTCATTTGTGCATATGGATGAGTTCATTCTTTTTCTACTCCTTTATGGGGTTTTTGGGCCTCCAACATGAAGTTGGTGGGGTGGGTCACTCCATGTTGGGGATTCAATTATAATATTTGGTGTTTCAGACTATCATAACTTATAATTAACTACAGTAATAATATTTCAAACCCCTCCTTGTTACCATATTTACTATTACTATGGTATTTACTATTTCCAACTCATTCTCTCTTGTCCTCTCTGTTACAATGTTTACTATGTAGTACCAAGCTTTAGTTGGCACCCCAAACACAAACTATTATAACCTATAGAGAATTATAACCCACTGGCTAATAACCAATTCAATGTCTCAAATGCCCCTCTTCATGGTTATAAGGTGGGAAGGACGAACCACCATGAGAAGGTTTAGTTTTCAAAAGGACTAGCTATTATAAACTTAGATGTTTTGAAGCTTATGGATTTTATTCTGTCATTAGACGACCTACTTGGATATCAAATGACCTATCACATTTCCCTATGTCATAGTGGTTCATGTGATTGAATATTTGGTATCTAATCACCTGCAAACAGAAAATACCCAACAAGATATCCAAAAACAGGGGAAACAACTATCCCTGATTTATATTTGATCCAAGAGTTCAACACCAGAACATGAAAACAGTAGCAATTTAGCAAAGATAATAACACCCCCAGCAAATAATAGAGTGCTGGCTCTCTCCCACTCTAAGGCTCAACCCTCACTTTTCCCAGCCCAGCCAAACCCCTACATAGACCCTCATTCTTCAGCAATGGTCGTCCCCACTCTCGAAATATTCAACCTTACGTTCCACTTCCTTTCTGTTCCTGTGAATTGTCTTTCTTTAGCTATAGGGTTACTAATATGTAACTGATATACTGACTGCAGTTCAATCATCTTATATAATAAAGGGATAGTTGCAAATTTAGCCATTAGATGCAAAATAATTAAATATATAGTAACATTTTTAAAAATTGCAAACATAGCAAAATTTGTCAAATTCTATCAATGATAGAAGTCTATTACTGATAGACCATGTTGTAAATATTGATCTATCATTGATAGATCATACAAATCTATCAGTGATATAAGTCTATCAGCGATAGTTTTGCTATATTTGCAATTTTTTTTAAATGTTGCTATATCCTTAATTATTATTTCTAAAATGGTCATAAATTATAATTACCCTATAATGAAGAGTGTAGAAAAATGAGTTCAGAGGACTAGCAAGCTACTGGTTTCACTAAATAATTACTAAACTTCTTGTTCACTAGTTATTTCACCTGTAAAGTGGTAATCACCTCTAAAGTGGTAAAGATTGGAGCATCCCCCTCCCACAACATGTTAGGGATGATATGTGATAACAACCAAATAGTGTTATAAATTGTATTTTTTGCCTTCTGGTAATGTGTGAAAAGTTGAATATTTTGAGAAAAGAATATGTTTACAGTTCAACTCTCATATTTTGTAATGTTTAGACAATTCAATTGTATTTTTTATTGCAGCATAATTGTACAAAAGTTTGAATCGAACTTTCAGATGATGGGTGTATTGCTGATAATACAGCCCCAAGAAATACATAATACCCAATTTTCTTAAACAATGCATGGAATCCCTGCAGAGTTGTATACTGCACGAGTTTTCTTTGGCATCTGAAGTTAATATGTGTTTCTATATGCTTGCTTGTCGAAGCGAATGTTATTGAGGGAATTCAGTTTCTGCCAATATAATATATCAACATATGTTGTTCTTTTTGTCACACGATCTTCTTCCATGTATGGAATAATAGCAAGTTTTTTTGTCACACGATCTTCTTCCATGTATGGAATAATAGCGAGTTTTATGTACGATGTTCTTTTTTGGTCGGAGGAAACTCAGAAGATTGATTTGGGTGTTGTTGAGTATGCTGATTATTTTTTCCCTTTTTTTTCCAGCACAGGAAGGTGCTGAGTATCATCAAAGTTCTGACTTTCTGTACTTTTTATTCTTGACAATGACTTCCAGCTAG

mRNA sequence

ATGAGAACAGACCCCATTCAAGTGCCCATCACACTAAATGGTTTGTATCATGATTCTGGTCTCACTTCATCACAGATCCTACCCTTTCTTCAGCTCTTCGGGAATCTTAAGCTTCCCCTTTCGCCACCCAACGGGAGGGGAATTACAGCACAGGAAGGTGCTGAGTATCATCAAAGTTCTGACTTTCTGTACTTTTTATTCTTGACAATGACTTCCAGCTAG

Coding sequence (CDS)

ATGAGAACAGACCCCATTCAAGTGCCCATCACACTAAATGGTTTGTATCATGATTCTGGTCTCACTTCATCACAGATCCTACCCTTTCTTCAGCTCTTCGGGAATCTTAAGCTTCCCCTTTCGCCACCCAACGGGAGGGGAATTACAGCACAGGAAGGTGCTGAGTATCATCAAAGTTCTGACTTTCTGTACTTTTTATTCTTGACAATGACTTCCAGCTAG

Protein sequence

MRTDPIQVPITLNGLYHDSGLTSSQILPFLQLFGNLKLPLSPPNGRGITAQEGAEYHQSSDFLYFLFLTMTSS*
Homology
[Close]
BLAST of CsaV3_7G024340 vs. NCBI nr
Match: KGN44438.1 (hypothetical protein Csa_016129 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MRTDPIQVPITLNGLYHDSGLTSSQILPFLQLFGNLKLPLSPPNGRGITAQEGAEYHQSS 60
          MRTDPIQVPITLNGLYHDSGLTSSQILPFLQLFGNLKLPLSPPNGRGITAQEGAEYHQSS
Sbjct: 1  MRTDPIQVPITLNGLYHDSGLTSSQILPFLQLFGNLKLPLSPPNGRGITAQEGAEYHQSS 60

Query: 61 DFLYFLFLTMTSS 74
          DFLYFLFLTMTSS
Sbjct: 61 DFLYFLFLTMTSS 73

[Close]
BLAST of CsaV3_7G024340 vs. ExPASy TrEMBL
Match: A0A0A0K4P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290605 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.2e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MRTDPIQVPITLNGLYHDSGLTSSQILPFLQLFGNLKLPLSPPNGRGITAQEGAEYHQSS 60
          MRTDPIQVPITLNGLYHDSGLTSSQILPFLQLFGNLKLPLSPPNGRGITAQEGAEYHQSS
Sbjct: 1  MRTDPIQVPITLNGLYHDSGLTSSQILPFLQLFGNLKLPLSPPNGRGITAQEGAEYHQSS 60

Query: 61 DFLYFLFLTMTSS 74
          DFLYFLFLTMTSS
Sbjct: 61 DFLYFLFLTMTSS 73

The following BLAST results are available for this feature:
BLAST of CsaV3_7G024340 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44438.11.1e-33100.00hypothetical protein Csa_016129 [Cucumis sativus][more]
BLAST of CsaV3_7G024340 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G024340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4P05.2e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290605 PE=4 SV=1[more]
BLAST of CsaV3_7G024340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G024340.1CsaV3_7G024340.1mRNA