CsaV3_7G024060 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGGAATAAAACCGTGTGCATGCAAAGAAATAAAGGTACAAAGGCAAGAGTCGAAGCATCGTCAAAATTCCTATATAAATCCAAGCCTTTCCAATCGCTTCTCAAATCCCTATACATTCCTCTTACCTAAGGTGCAGACCTTTCTTCTCTTCTTCTCCCTGCTTAATTTTCAACTCTTTGGCTTGGGTTTTGTTGATTTTCCTCTGATTTTGATTCCTTTCTCTTCTTTTTCTGCTTTTCCTTGTAAGGTTTTTCCATTTTTCTTTATCTTCTCTCTCTTTTGTTCTTGATCGTCCACCAAATGGTTGTTTGTGTTTATATGAGTTCATTTTAGTTTAGGATATCTTCTTGTTTTATCATCTGTCAGTAAGAGAGGGGCGTTTATTTGCTTGAGGGTCACTCTTGAAATTATGTTTTTTCATTTTTCTTAGATTGTTGTGTGATTGTCAATAGTACCAGTTACTAGGGTAGAGGCTCATGTTGGTCGTGCATGCTTGTCTATTTCTTTTGTTCTTTTGATTTTATCTTTCTTATCTGTATGTTGCCTCTTTCTGATCATCCTGTTATAAACGTTTGTTTAGTGGAGACTAATGATATCATCCATCATAAATCGAATTTCTAAAAGAGCCGACGCCTCAAGTTCTCTGATCATGATAATTTATTTTCTCTGTTTGCGATTCCTTACTTGGAATTGCAATGTATGAATATTCTAGTCTTGATTCTGTTAGAATAAGGTTTATTGAGTACGAATGGAATGATATTATTTCCTACTAATGAGCTTATAGCCATTTAAGCGATCAACATAGTTTCAAGGACACGTGCTATCCATTATATGTATTTATAGTCATAGTCCCATTTCATTGATTTTCTTGGCGTTTTTTGCATATTTTTAATTTGATGTGATGCTTTCATATTTGAGTTTTGATCATACGTTTTTTTTTTTTTTTTTTTAAATTTTGCGTAGAAGTCATCGATGGCTTCCAAACGTATTGCCAAGGAGTTAAAAGACCTGCAAAAGGATCCTCCAGTTTCTTGCAGTGCTGGTTTGTGCTGAACAACCAATCTTGTTTTTAAATTTTACATTCAAAACCATTCATTTGGAACTATGATAAGTTAATTTGAAACAATCTTTTGCATATGCTTTGTGATACTAAAATACAATTTATACAACTTGGGTTCCCAATTAGAATCTTGCTTCATGATATTAACACGATGTAGACCCGTATTTCTTTCTATGAGATATTTCTAGATATTATAATCTGAGGCATTTTCTAAGCTTTCTTAGGCCATGATTGTTAATTGTAATGTCAATTTATATGGATAATGGTTTGGCCCATCTTGGTAGATAGTTTTGATTACCTTTCTGGACTTATGCAATGTCCTTGATGTTATTTTTGAACAGGTCTAATTTTTTACGGTGTTGTGGTTCACGAATATTGTAATATGGGACTGTATTTTATGGATGTGGTTTCCTAGAAAATGGATATTTGAGCATAACTGAGTTTTTTCTTTTATATGACATGTATAATGCATCATCTAACACCGGAACTTCTGAATCACTTCGCACCCATCTTTCTCCACTTGGTGTTTTCTTTTTACAAGATTATTTGCAGGTCCTGTTGGTCAAGACGTGTTTCACTGGCAAGCAACAATTATGGGTCCAGCAGATAGTCCTTATGCGGGGGGTTTATTTTCAGTGAACATTCACTTTCCACCAGATTATCCCTTTAAGCCACCAAAGGTAGTGAAGCCTTCCTTGCTCAGTCTGCTTCTATTTTCTTTCCCTCTTGATTGTATTCTAGTATTTGTCAATGAATTATTTTGTTCATGGGAACACGTTCACGATCCCTTGCAACTCTTGGTTTGTGGCAACAAAGTAACAGGTTTCTAATGATTTTTGTTTCCATTGGTACTGTTGCCTGAAAGTCTGTACATGACACTAAGGTTGGAGAATAAGTTTGAAGGTTGAGAATCTATTCCAATGGATGGAAACTGTTTTTGTTTTCCTTGGTACTTCAAAATATATTTCTGCTCTGTGTGCTATTCGTTTCTTATCTATGAGTGTCTAATTGGTTTCTGCTATTCCCATCACAACTAACAGAACCTTACTGCAAGTTCTTGTTACTTAATACCTAAGATTTTGATATCTAGGTAGGTAGGGAGTTTAGCTTGAACTCATTCTTATAGAGTCCTTTGCTTTTTCACACATGCTTCAGTGTTACCTCATCAACCAAATCCCTTGCCCTTGTATGATAAAAAAAAATGTTACCCCTTCAACCAAGAGTTGTTATATGTCTCCATATTAGAATAAAGGAAAGGTTGGTTGGTCACGTTTTGTGGTTTAGTTCCTCCTTTTTTTAATTTTTTTTGTGTTTAATTTTATTTTATTTTGTACTTTCATGTCCTTGGTTCACACAATGTAGATTTGGTTTAATTGTTGTTACCTAATGCTGCTGTTTTGAATTCTTTCTTTGTAACCTTGAAAAAGCGATCAAAATCGAATGTCAAAGAAATGGCCATATTATAGTAATGGCTGTTGTATTGTGTGTTAAGCAGGTTTCCTTTAAAACCAAAGTCTATCATCCTAACATCAACAATAATGGAAGCATCTGCCTTGACATTTTGAAAGAGCAATGGAGCCCTGCTCTTACTGTTTCCAAGGTTCTACCATGCTTCTGTCATCTCGTTAAATCTTTACTTTATATTATGTTTAGTTTTTATGTCTATTCTGATTTTGTCTTTCAGTTTTTATATATTCTTTTTTTGTTTTATGAACCTTGCATAAGCTTTTTCTAGTTCTGATTTATTTTTTTATTAAACATTTAACAAAAACCCAATAATGTTGAGCTTCTAACATTTGTCCAACGAGCAATAAGTTCTCGTAATTTGGAACCTTCTTAATAGGTTACTAAGAGTAGGAGTTGGGGAGTTTAAATCTATGCATTGTTTGGTTAAGGAGATTGTGGGCCCTGTGACGGAAAGGTTTAATTCCACTACCCATGCATTGGCTCACAACTAAAAAAACTCCAGTCCTTGTCTCAATTGCCTTTTAATAGATTTTTTAACTTCTTTATAAACTTAATGTGTGTATGTGTGAGAGATAGATCCCCTCTCCAAAAGGAGAACTTATAAACTCCTAGTTCTAGATTTATAATTTTTGTCAATTAGGTTAACCATGAATTTATCAAGGTCGGGACAATATTGGATGCAATTTGTACATTTCGGAACTTATCGAACACTTAAGTTGAAACCTTAAAAAATTATCAACAAGGGCTAAATAGTTTGCTTATCCTAGATTCAAGAATCAAATAGAATACATGAGTTTTAGCTGCAGGGATGTGTAAGGCTACCAACCTCATATTAAATAAAAACACCAAACTAGCAAACAAAGACAGTACTTCGGAGTTGTTTATGTATATATAAATGCCAAAATGTTCACAAACTTTGATATCAAGATGACCAAGAGCAAAAGAATACATAAAGAAACATACCACCAGCCCCCTTTTACATCAATGGAGACTCTAGTCGGCTACATCGGCAACAGTAGCCTACTCCCATAAAGATGATAAAAGAAAACCTAGCTACCCTCTCCCTATCATTCCCTATTTAAAGCCTTTCCTAAAATTCCCCATGTGGGCTCTACTCTGTAGGAACTTTTATTCCCATCATCCCTCCTCATTAACAATAAGTGCATTTTCCTTTTTACCCTTTCTCACCTACATATGAATGATTGGGGGCCTTATAGGATGTTAACCTTGGAGCTTTTAATTGGATTAACCATCTACTTGGTTTATAAAATTGTTGCAGTTAAATCCTTAACTACTATTGCCTACTGCTGAATCACCCTTGAATTATAATTATTGTTGAACGTAGCAACTGCAGCAGTTGAGTTTTATGGGTTGAAGTAGAAGGAGCAAAATAAAGTTTAAGGTTATTTGAATAATGTTGTGTGCAGGTGTTATTGTCGATATGCTCACTGCTAACGGACCCAAATCCAGATGATCCATTGGTTCCAGATATAGCTCACACGTACAAAAATGACAGAGCCAAGTACGAAAATACTGCCCGATCTTGGACCCAGAAGTATGCGATGGGCTAAATAAAACAAAACCAACAATGCTTGCACTTTTATGTTTGCTGGATTTGCATGCAAAGGTTATAATTATTAGGTTATATTATGCTCAAACTTAGTGGAGATCAACATTACAGTGGTTGCTTTCTCTGCACCATCTAATAATATTTTGTGATTAATATATCATCACCTTGTACATCTATATTCTCAACTTCCTCAATTCTGCTATGCTATGGGGGTTGAATATGAAATTACTTGCAAGTCTAATAGGGTTGATATCTTCTAGGTGGTGGTTCATGGATTTTCCTTACCTAAAATTGAAGAGTGTAGATAAAATAAGAATGGAAAGGAGCATGTTTGTCTATTCAAACACATATGTTGATTGATTATGATACTAATATTCTATAGTTTACCATCTCCTCTCGTGTGATCAGAGAGGATGTGGCATGGCTATTATATTAATTCACTTTCACTATGTAATCATTTGTAACATTACATAAGCTATAGTTTAGGTCACATTGTGTACAAGATTTATCATTTTGTCATGTAATTGCAAATTGTTAAAATCTAGGCTTATTATTAGTTTTCAACATACACATTTTGATCAATCCATTACGACTTTCTATAGCATCCAATTATAACATTTGATTCATTCACGCTGTAAAGAGAAAGTGAATTACATGACAAAATTATAAATCTTGTACACAATGTAAGAATTGTAAGAACATGTTT ATGGCTTCCAAACGTATTGCCAAGGAGTTAAAAGACCTGCAAAAGGATCCTCCAGTTTCTTGCAGTGCTGGTCCTGTTGGTCAAGACGTGTTTCACTGGCAAGCAACAATTATGGGTCCAGCAGATAGTCCTTATGCGGGGGGTTTATTTTCAGTGAACATTCACTTTCCACCAGATTATCCCTTTAAGCCACCAAAGGTTTCCTTTAAAACCAAAGTCTATCATCCTAACATCAACAATAATGGAAGCATCTGCCTTGACATTTTGAAAGAGCAATGGAGCCCTGCTCTTACTGTTTCCAAGGTGTTATTGTCGATATGCTCACTGCTAACGGACCCAAATCCAGATGATCCATTGGTTCCAGATATAGCTCACACGTACAAAAATGACAGAGCCAAGTACGAAAATACTGCCCGATCTTGGACCCAGAAGTATGCGATGGGCTAA ATGGCTTCCAAACGTATTGCCAAGGAGTTAAAAGACCTGCAAAAGGATCCTCCAGTTTCTTGCAGTGCTGGTCCTGTTGGTCAAGACGTGTTTCACTGGCAAGCAACAATTATGGGTCCAGCAGATAGTCCTTATGCGGGGGGTTTATTTTCAGTGAACATTCACTTTCCACCAGATTATCCCTTTAAGCCACCAAAGGTTTCCTTTAAAACCAAAGTCTATCATCCTAACATCAACAATAATGGAAGCATCTGCCTTGACATTTTGAAAGAGCAATGGAGCCCTGCTCTTACTGTTTCCAAGGTGTTATTGTCGATATGCTCACTGCTAACGGACCCAAATCCAGATGATCCATTGGTTCCAGATATAGCTCACACGTACAAAAATGACAGAGCCAAGTACGAAAATACTGCCCGATCTTGGACCCAGAAGTATGCGATGGGCTAA MASKRIAKELKDLQKDPPVSCSAGPVGQDVFHWQATIMGPADSPYAGGLFSVNIHFPPDYPFKPPKVSFKTKVYHPNINNNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPDIAHTYKNDRAKYENTARSWTQKYAMG* Homology
BLAST of CsaV3_7G024060 vs. NCBI nr
Match: XP_004150398.1 (ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus] >XP_011659089.1 ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus] >KAE8646160.1 hypothetical protein Csa_016822 [Cucumis sativus]) HSP 1 Score: 315.5 bits (807), Expect = 2.5e-82 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. NCBI nr
Match: XP_038898845.1 (ubiquitin-conjugating enzyme E2 5B-like isoform X1 [Benincasa hispida]) HSP 1 Score: 304.7 bits (779), Expect = 4.4e-79 Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. NCBI nr
Match: XP_038898846.1 (ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_038898847.1 ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_038898848.1 ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida]) HSP 1 Score: 304.7 bits (779), Expect = 4.4e-79 Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. NCBI nr
Match: XP_022932110.1 (ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022932111.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022932112.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita moschata] >XP_022972925.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita maxima] >XP_022972926.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita maxima] >XP_023521944.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita pepo subsp. pepo] >XP_023521948.1 ubiquitin-conjugating enzyme E2 5B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303.9 bits (777), Expect = 7.6e-79 Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. NCBI nr
Match: XP_022131792.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia] >XP_022131794.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia]) HSP 1 Score: 301.6 bits (771), Expect = 3.8e-78 Identity = 140/147 (95.24%), Postives = 144/147 (97.96%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 2.8e-76 Identity = 130/148 (87.84%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy Swiss-Prot
Match: P35134 (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana OX=3702 GN=UBC11 PE=1 SV=2) HSP 1 Score: 285.0 bits (728), Expect = 4.8e-76 Identity = 130/148 (87.84%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 6.2e-76 Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 8.1e-76 Identity = 129/148 (87.16%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy Swiss-Prot
Match: Q8S920 (Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5A PE=2 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.1e-75 Identity = 127/147 (86.39%), Postives = 140/147 (95.24%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy TrEMBL
Match: A0A0A0K9B9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G281400 PE=3 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.2e-82 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy TrEMBL
Match: A0A6J1IA05 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita maxima OX=3661 GN=LOC111471432 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 3.7e-79 Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy TrEMBL
Match: A0A6J1EVG1 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita moschata OX=3662 GN=LOC111438420 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 3.7e-79 Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy TrEMBL
Match: A0A6J1BS08 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Momordica charantia OX=3673 GN=LOC111004866 PE=3 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78 Identity = 140/147 (95.24%), Postives = 144/147 (97.96%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. ExPASy TrEMBL
Match: A0A6J1IKW1 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111477162 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 5.3e-78 Identity = 138/148 (93.24%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 285.0 bits (728), Expect = 3.4e-77 Identity = 130/148 (87.84%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 285.0 bits (728), Expect = 3.4e-77 Identity = 130/148 (87.84%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 284.6 bits (727), Expect = 4.4e-77 Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 284.6 bits (727), Expect = 4.4e-77 Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of CsaV3_7G024060 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 282.3 bits (721), Expect = 2.2e-76 Identity = 128/148 (86.49%), Postives = 140/148 (94.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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