CsaV3_7G023650 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G023650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein MIZU-KUSSEI 1
Location	chr7: 12692023 .. 12693053 (-)
RNA-Seq Expression	CsaV3_7G023650
Synteny	CsaV3_7G023650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATTCATTTGTTATAGTTTGTTGATACATTTGATAGATTTAATACACTTAATAAATTTGATACACTTGATCTATTGTGTTGCTACACACTTTTGGTTACCACAGAGGAAAAGTCAACATATGTATCCAAACAAATTCTTGCTCAACCAATCCGATTCTCCTCCTCGAATTGGTGATCCCCATTGCAATCCTCGCCCGAGAAATGAGTGGCGGCGTCCTTAGAATCACCCTTGAATCCGCCACGGCGATGGATTCATGGGGGAGATCGGTTTTGTCGTCCTCAGAGTGGAGTATGTATTATTTCAACGAAAGGAAAGTTAGGTACAGATTGAGACAAGGGACATCAGCGGCAGAGGTGGAGATGTTGTGGGGGTTGGGGAGGGTGGCGGAAGAGGCGGGAGTTATTGAAAGTGAAGATGATTGTTAATTTGATGTATTTGAGAGGGAATTTCGATAGAGTTCGTAGAGCGTCGGGAGACTCCGAATCATTCCATTTGAGATATCCAAATGGAAGCATTCATCAAGAGCTAAATATTTTCTTTTTTCGATCCAAATAAATAAATTAATTCTCTCTCTCTAGCTTTTTTTTTTTTTTAATGGGCATTTTCAACTTTTTTGCTGCTGCTTATATTGGTCTTGTGTTTCCTTACCACCAGCTTCTGCTTATAAATTTGTGTATCCAATTACGTTCTGTGACGTTAATATGAGATCATAATGTGCGATTTGCTACTCACCTTCACTTTCTCTCCTACCTTCTTGAATTGGGTTTTCTATATGGTATTGTAGTTTAATTTGAATTCCATGCCTATATCGTTTAATTTAATTAGAGTTTAGAATGTGATCAAAAATTTACTGTAATTCGTAATTAGATAGAGGAGAAACCGTAAAGAAGAATGGTGGAGAAGAGGAGAAGAAAATGAGGAGAAAAATGAGAAGAAGATGAGAAAAAGAGGAGGACAAAGCTAAAAGAAAGAAACAAAAAATGAAGAGGAGATGAGAGGACATTTTTGGAGTAATGAAAAATAGAAAA

mRNA sequence

ATGAGTGGCGGCGTCCTTAGAATCACCCTTGAATCCGCCACGGCGATGGATTCATGGGGGAGATCGGTTTTGTCGTCCTCAGAGTGGAGTATGTATTATTTCAACGAAAGGAAAGTTAGGTACAGATTGAGACAAGGGACATCAGCGGCAGAGGTGGAGATGTTGTGGGGGTTGGGGAGGGTGGCGGAAGAGGCGGGAGTTATTGAAAGTGAAGATGATTGTTAA

Coding sequence (CDS)

ATGAGTGGCGGCGTCCTTAGAATCACCCTTGAATCCGCCACGGCGATGGATTCATGGGGGAGATCGGTTTTGTCGTCCTCAGAGTGGAGTATGTATTATTTCAACGAAAGGAAAGTTAGGTACAGATTGAGACAAGGGACATCAGCGGCAGAGGTGGAGATGTTGTGGGGGTTGGGGAGGGTGGCGGAAGAGGCGGGAGTTATTGAAAGTGAAGATGATTGTTAA

Protein sequence

MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGRVAEEAGVIESEDDC*

Homology

[Close]

BLAST of CsaV3_7G023650 vs. NCBI nr
Match: KGN44363.1 (hypothetical protein Csa_016829 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 7.0e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60
          MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR
Sbjct: 1  MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60

Query: 61 VAEEAGVIESEDDC 75
          VAEEAGVIESEDDC
Sbjct: 61 VAEEAGVIESEDDC 74

[Close]

BLAST of CsaV3_7G023650 vs. NCBI nr
Match: XP_008440568.1 (PREDICTED: protein MIZU-KUSSEI 1 [Cucumis melo] >KAA0036325.1 protein MIZU-KUSSEI 1 [Cucumis melo var. makuwa] >TYK12719.1 protein MIZU-KUSSEI 1 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 2.1e-16
Identity = 55/73 (75.34%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60
           M GGVLRI LESATA +S GRSVLSS  WSM YFN RKV Y LR+G SAAEVE L  LGR
Sbjct: 108 MRGGVLRIALESATAANSGGRSVLSSPAWSM-YFNGRKVGYGLRRGASAAEVETLRRLGR 167

Query: 61  VAEEAGVIESEDD 74
           VAE AGVIE EDD
Sbjct: 168 VAEGAGVIEGEDD 179

[Close]

BLAST of CsaV3_7G023650 vs. NCBI nr
Match: XP_011657961.1 (protein MIZU-KUSSEI 1 [Cucumis sativus] >KGN48725.1 hypothetical protein Csa_003562 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 6.0e-16
Identity = 54/73 (73.97%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1   MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60
           M GGVLRI LESAT  +S GRSVLSS  WSM YFN RKV Y LR+G SAAEVE L  LGR
Sbjct: 108 MRGGVLRIALESATTANSGGRSVLSSPAWSM-YFNGRKVGYGLRRGASAAEVETLRRLGR 167

Query: 61  VAEEAGVIESEDD 74
           VAE AGVIE EDD
Sbjct: 168 VAEGAGVIEGEDD 179

[Close]

BLAST of CsaV3_7G023650 vs. NCBI nr
Match: XP_038883078.1 (protein MIZU-KUSSEI 1 [Benincasa hispida])

HSP 1 Score: 80.9 bits (198), Expect = 5.2e-12
Identity = 49/75 (65.33%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 1   MSGGVLRITLESAT--AMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGL 60
           M GGVLRI LES +  A +S GRSVLSS  WSM YFN RKV Y LR+  SAAEVE L  L
Sbjct: 109 MGGGVLRIALESTSTAAANSGGRSVLSSPAWSM-YFNGRKVGYGLRRRASAAEVETLRRL 168

Query: 61  GRVAEEAGVIESEDD 74
           G VAE AG++E EDD
Sbjct: 169 GTVAEGAGIMEGEDD 182

[Close]

BLAST of CsaV3_7G023650 vs. NCBI nr
Match: XP_022950422.1 (protein MIZU-KUSSEI 1-like [Cucurbita moschata])

HSP 1 Score: 70.9 bits (172), Expect = 5.4e-09
Identity = 47/85 (55.29%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1   MSGGVLRITLES---ATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWG 60
           M GGVLRI LES   A A++S GRSVLSS  WSM YFN RKV Y LR+  SAA+VE L  
Sbjct: 111 MRGGVLRIALESTSTAAAVNSGGRSVLSSPAWSM-YFNGRKVGYALRRRASAADVETLRR 170

Query: 61  LGRVAEEAGVI---------ESEDD 74
           LG + E AG++         E EDD
Sbjct: 171 LGTMVEGAGIMGGKEVEGEGEGEDD 194

[Close]

BLAST of CsaV3_7G023650 vs. ExPASy TrEMBL
Match: A0A0A0K4D6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270570 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60
          MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR
Sbjct: 1  MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60

Query: 61 VAEEAGVIESEDDC 75
          VAEEAGVIESEDDC
Sbjct: 61 VAEEAGVIESEDDC 74

[Close]

BLAST of CsaV3_7G023650 vs. ExPASy TrEMBL
Match: A0A5A7T4C8 (Protein MIZU-KUSSEI 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003070 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 55/73 (75.34%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60
           M GGVLRI LESATA +S GRSVLSS  WSM YFN RKV Y LR+G SAAEVE L  LGR
Sbjct: 108 MRGGVLRIALESATAANSGGRSVLSSPAWSM-YFNGRKVGYGLRRGASAAEVETLRRLGR 167

Query: 61  VAEEAGVIESEDD 74
           VAE AGVIE EDD
Sbjct: 168 VAEGAGVIEGEDD 179

[Close]

BLAST of CsaV3_7G023650 vs. ExPASy TrEMBL
Match: A0A1S3B0Z8 (protein MIZU-KUSSEI 1 OS=Cucumis melo OX=3656 GN=LOC103484947 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 55/73 (75.34%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60
           M GGVLRI LESATA +S GRSVLSS  WSM YFN RKV Y LR+G SAAEVE L  LGR
Sbjct: 108 MRGGVLRIALESATAANSGGRSVLSSPAWSM-YFNGRKVGYGLRRGASAAEVETLRRLGR 167

Query: 61  VAEEAGVIESEDD 74
           VAE AGVIE EDD
Sbjct: 168 VAEGAGVIEGEDD 179

[Close]

BLAST of CsaV3_7G023650 vs. ExPASy TrEMBL
Match: A0A0A0KG77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499200 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-16
Identity = 54/73 (73.97%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1   MSGGVLRITLESATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWGLGR 60
           M GGVLRI LESAT  +S GRSVLSS  WSM YFN RKV Y LR+G SAAEVE L  LGR
Sbjct: 108 MRGGVLRIALESATTANSGGRSVLSSPAWSM-YFNGRKVGYGLRRGASAAEVETLRRLGR 167

Query: 61  VAEEAGVIESEDD 74
           VAE AGVIE EDD
Sbjct: 168 VAEGAGVIEGEDD 179

[Close]

BLAST of CsaV3_7G023650 vs. ExPASy TrEMBL
Match: A0A6J1GES2 (protein MIZU-KUSSEI 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453526 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-09
Identity = 47/85 (55.29%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1   MSGGVLRITLES---ATAMDSWGRSVLSSSEWSMYYFNERKVRYRLRQGTSAAEVEMLWG 60
           M GGVLRI LES   A A++S GRSVLSS  WSM YFN RKV Y LR+  SAA+VE L  
Sbjct: 111 MRGGVLRIALESTSTAAAVNSGGRSVLSSPAWSM-YFNGRKVGYALRRRASAADVETLRR 170

Query: 61  LGRVAEEAGVI---------ESEDD 74
           LG + E AG++         E EDD
Sbjct: 171 LGTMVEGAGIMGGKEVEGEGEGEDD 194

The following BLAST results are available for this feature:

BLAST of CsaV3_7G023650 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44363.1	7.0e-33	100.00	hypothetical protein Csa_016829 [Cucumis sativus]	[more]
XP_008440568.1	2.1e-16	75.34	PREDICTED: protein MIZU-KUSSEI 1 [Cucumis melo] >KAA0036325.1 protein MIZU-KUSSE...	[more]
XP_011657961.1	6.0e-16	73.97	protein MIZU-KUSSEI 1 [Cucumis sativus] >KGN48725.1 hypothetical protein Csa_003...	[more]
XP_038883078.1	5.2e-12	65.33	protein MIZU-KUSSEI 1 [Benincasa hispida]	[more]
XP_022950422.1	5.4e-09	55.29	protein MIZU-KUSSEI 1-like [Cucurbita moschata]	[more]

BLAST of CsaV3_7G023650 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G023650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4D6	3.4e-33	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270570 PE=4 SV=1	[more]
A0A5A7T4C8	1.0e-16	75.34	Protein MIZU-KUSSEI 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25...	[more]
A0A1S3B0Z8	1.0e-16	75.34	protein MIZU-KUSSEI 1 OS=Cucumis melo OX=3656 GN=LOC103484947 PE=4 SV=1	[more]
A0A0A0KG77	2.9e-16	73.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499200 PE=4 SV=1	[more]
A0A6J1GES2	2.6e-09	55.29	protein MIZU-KUSSEI 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453526 PE=4 SV...	[more]

BLAST of CsaV3_7G023650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006460	Protein MIZU-KUSSEI 1-like, plant	PFAM	PF04759	DUF617	coord: 1..71 e-value: 8.9E-8 score: 32.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G023650.1	CsaV3_7G023650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010274	hydrotropism