CsaV3_7G023640 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G023640
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 12676126 .. 12676433 (+)
RNA-Seq ExpressionCsaV3_7G023640
SyntenyCsaV3_7G023640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAAAATCTACACCGAGCTGCCTCTGCCACCGTCCACTACGGTGGTCCGGCCAAAGACGAAGATAAGTTGGAAACACCCCAGAAAGTGAATCTGAAAGTGATATTTAGCTTCTTCGGACGGTAATGTGGAGTGATGGGTGTGAGAATCGGCCGCCGGTGAGCACCACCGTTCACGGCGGAGGACGAAAAAACAGGGATTTTGCGAAGTGGGTTTTTTTGGTTTTCCCTGTTTTCGTATATTTTTCTGTTGTCGTTGTCGATTTGAGGATGGTGGATGGAGAAAAAGGAAAAGGGGAGTTGTGA

mRNA sequence

ATGGCGAAAAATCTACACCGAGCTGCCTCTGCCACCGTCCACTACGGTGGTCCGGCCAAAGACGAAGATAAGTTGGAAACACCCCAGAAACTTCTTCGGACGGTAATGTGGAGTGATGGGTGTGAGAATCGGCCGCCGGTGAGCACCACCGTTCACGGCGGAGGACGAAAAAACAGGGATTTTGCGAAGTGGGTTTTTTTGGTTTTCCCTGTTTTCGTATATTTTTCTGTTGTCGTTGTCGATTTGAGGATGGTGGATGGAGAAAAAGGAAAAGGGGAGTTGTGA

Coding sequence (CDS)

ATGGCGAAAAATCTACACCGAGCTGCCTCTGCCACCGTCCACTACGGTGGTCCGGCCAAAGACGAAGATAAGTTGGAAACACCCCAGAAACTTCTTCGGACGGTAATGTGGAGTGATGGGTGTGAGAATCGGCCGCCGGTGAGCACCACCGTTCACGGCGGAGGACGAAAAAACAGGGATTTTGCGAAGTGGGTTTTTTTGGTTTTCCCTGTTTTCGTATATTTTTCTGTTGTCGTTGTCGATTTGAGGATGGTGGATGGAGAAAAAGGAAAAGGGGAGTTGTGA

Protein sequence

MAKNLHRAASATVHYGGPAKDEDKLETPQKLLRTVMWSDGCENRPPVSTTVHGGGRKNRDFAKWVFLVFPVFVYFSVVVVDLRMVDGEKGKGEL*
Homology
[Close]
BLAST of CsaV3_7G023640 vs. NCBI nr
Match: KGN44362.1 (hypothetical protein Csa_016444 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 3.4e-48
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MAKNLHRAASATVHYGGPAKDEDKLETPQKLLRTVMWSDGCENRPPVSTTVHGGGRKNRD 60
          MAKNLHRAASATVHYGGPAKDEDKLETPQKLLRTVMWSDGCENRPPVSTTVHGGGRKNRD
Sbjct: 1  MAKNLHRAASATVHYGGPAKDEDKLETPQKLLRTVMWSDGCENRPPVSTTVHGGGRKNRD 60

Query: 61 FAKWVFLVFPVFVYFSVVVVDLRMVDGEKGKGEL 95
          FAKWVFLVFPVFVYFSVVVVDLRMVDGEKGKGEL
Sbjct: 61 FAKWVFLVFPVFVYFSVVVVDLRMVDGEKGKGEL 94

[Close]
BLAST of CsaV3_7G023640 vs. ExPASy TrEMBL
Match: A0A0A0K7Q3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270560 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MAKNLHRAASATVHYGGPAKDEDKLETPQKLLRTVMWSDGCENRPPVSTTVHGGGRKNRD 60
          MAKNLHRAASATVHYGGPAKDEDKLETPQKLLRTVMWSDGCENRPPVSTTVHGGGRKNRD
Sbjct: 1  MAKNLHRAASATVHYGGPAKDEDKLETPQKLLRTVMWSDGCENRPPVSTTVHGGGRKNRD 60

Query: 61 FAKWVFLVFPVFVYFSVVVVDLRMVDGEKGKGEL 95
          FAKWVFLVFPVFVYFSVVVVDLRMVDGEKGKGEL
Sbjct: 61 FAKWVFLVFPVFVYFSVVVVDLRMVDGEKGKGEL 94

The following BLAST results are available for this feature:
BLAST of CsaV3_7G023640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44362.13.4e-48100.00hypothetical protein Csa_016444 [Cucumis sativus][more]
BLAST of CsaV3_7G023640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G023640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7Q31.6e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270560 PE=4 SV=1[more]
BLAST of CsaV3_7G023640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G023640.1CsaV3_7G023640.1mRNA