CsaV3_7G023620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G023620
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 12660354 .. 12660800 (-)
RNA-Seq ExpressionCsaV3_7G023620
SyntenyCsaV3_7G023620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTCTCCAAGAAGAACATGGCCGTTTTTATTGGCATTCTTTTGTTTAGCATCAACTTTGTTGAAATTGCAAGTGCAGCTAGACCCATCAAACGTCGTCCTTATGAAGATAATACCAAAGTTGTATGTGGTCCACCAAGAAGGTCTATAGATTTTGAATTAGACGATGATGCTCAAAAATATGCAAGTTGGTACAATACAGTTTATCCTTGCAAATCTCTACGTAAAGCCAAACACAGTATCAACCGAGACAAAGTAGGAAATACTTTTGATGTCAACACCTCACAAAATGTTAAAGGAGATAAAGATCCTCACATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTGTTGACACCATCTCACAAGAGATTAAAGGAGATAAAGATCATCATTTGATTATTCTTCCTCAACCATCCATTGTTTAA

mRNA sequence

ATGGTGGTCTCCAAGAAGAACATGGCCGTTTTTATTGGCATTCTTTTGTTTAGCATCAACTTTGTTGAAATTGCAAGTGCAGCTAGACCCATCAAACGTCGTCCTTATGAAGATAATACCAAAGTTGTATGTGGTCCACCAAGAAGGTCTATAGATTTTGAATTAGACGATGATGCTCAAAAATATGCAAGTTGGTACAATACAGTTTATCCTTGCAAATCTCTACGTAAAGCCAAACACAGTATCAACCGAGACAAAGTAGGAAATACTTTTGATGTCAACACCTCACAAAATGTTAAAGGAGATAAAGATCCTCACATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTGTTGACACCATCTCACAAGAGATTAAAGGAGATAAAGATCATCATTTGATTATTCTTCCTCAACCATCCATTGTTTAA

Coding sequence (CDS)

ATGGTGGTCTCCAAGAAGAACATGGCCGTTTTTATTGGCATTCTTTTGTTTAGCATCAACTTTGTTGAAATTGCAAGTGCAGCTAGACCCATCAAACGTCGTCCTTATGAAGATAATACCAAAGTTGTATGTGGTCCACCAAGAAGGTCTATAGATTTTGAATTAGACGATGATGCTCAAAAATATGCAAGTTGGTACAATACAGTTTATCCTTGCAAATCTCTACGTAAAGCCAAACACAGTATCAACCGAGACAAAGTAGGAAATACTTTTGATGTCAACACCTCACAAAATGTTAAAGGAGATAAAGATCCTCACATTGTTGACAACACCTCACAAGAGATTAAAGGGGATAAAGATCATCATATTGTTGACACCATCTCACAAGAGATTAAAGGAGATAAAGATCATCATTTGATTATTCTTCCTCAACCATCCATTGTTTAA

Protein sequence

MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQKYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKDHHIVDTISQEIKGDKDHHLIILPQPSIV*
Homology
[Close]
BLAST of CsaV3_7G023620 vs. NCBI nr
Match: KAE8646140.1 (hypothetical protein Csa_015664 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQ 60
           MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQ
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120
           KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120

Query: 121 HHIVDTISQEIKGDKDHHLIILPQPSIV 149
           HHIVDTISQEIKGDKDHHLIILPQPSIV
Sbjct: 121 HHIVDTISQEIKGDKDHHLIILPQPSIV 148

[Close]
BLAST of CsaV3_7G023620 vs. NCBI nr
Match: KGN44636.2 (hypothetical protein Csa_016656 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQ 60
           MVVSKKNMAVFIGILLFSINFVEIASAARPIKRR Y DNTKVVCGPPRRSIDFELDDDAQ
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120
           KYASWYNTVYPCKSLRKAKHSIN DKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINGDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120

Query: 121 HHIVDTISQEIKGDKDHHLIILPQPSIV 149
           HH+VDTISQEIKGDKDHHLIILPQPS+V
Sbjct: 121 HHLVDTISQEIKGDKDHHLIILPQPSMV 148

[Close]
BLAST of CsaV3_7G023620 vs. ExPASy TrEMBL
Match: A0A0A0K3T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270050 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.8e-76
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQ 60
           MVVSKKNMAVFIGILLFSINFVEIASAARPIKRR Y DNTKVVCGPPRRSIDFELDDDAQ
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120
           KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120

Query: 121 HHIVDTISQEIKGDKDHHLIILPQPSIV 149
           HHIVDTISQEIKGDKDHHLIILPQPSIV
Sbjct: 121 HHIVDTISQEIKGDKDHHLIILPQPSIV 148

[Close]
BLAST of CsaV3_7G023620 vs. ExPASy TrEMBL
Match: A0A0A0K605 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.5e-75
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRPYEDNTKVVCGPPRRSIDFELDDDAQ 60
           MVVSKKNMAVFIGILLFSINFVEIASAARPIKRR Y DNTKVVCGPPRRSIDFELDDDAQ
Sbjct: 1   MVVSKKNMAVFIGILLFSINFVEIASAARPIKRRSYGDNTKVVCGPPRRSIDFELDDDAQ 60

Query: 61  KYASWYNTVYPCKSLRKAKHSINRDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120
           KYASWYNTVYPCKSLRKAKHSIN DKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD
Sbjct: 61  KYASWYNTVYPCKSLRKAKHSINGDKVGNTFDVNTSQNVKGDKDPHIVDNTSQEIKGDKD 120

Query: 121 HHIVDTISQEIKGDKDHHLIILPQPSIV 149
           HHIVDTISQEIKGDKDHHLIILPQPS+V
Sbjct: 121 HHIVDTISQEIKGDKDHHLIILPQPSMV 148

The following BLAST results are available for this feature:
BLAST of CsaV3_7G023620 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646140.11.4e-77100.00hypothetical protein Csa_015664 [Cucumis sativus][more]
KGN44636.21.9e-7496.62hypothetical protein Csa_016656 [Cucumis sativus][more]
BLAST of CsaV3_7G023620 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G023620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3T53.8e-7698.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G270050 PE=4 SV=1[more]
A0A0A0K6055.5e-7597.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269050 PE=4 SV=1[more]
BLAST of CsaV3_7G023620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G023620.1CsaV3_7G023620.1mRNA