CsaV3_7G023110 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G023110
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 12025251 .. 12026099 (-)
RNA-Seq ExpressionCsaV3_7G023110
SyntenyCsaV3_7G023110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATCACGGAAAATATTCCCAACTTTCCTGCCACTTGTCGAATCGTTGATGATGCCAGTTCCAAAATTTCCTTAGCCCGTGGGGCTGCCAAAGTTGCACGTAGTTGTGCTTCTGTTGCTCGTGATCGTGCTTCTACTGCCCTCTGCATCGACAAGGCCAATGCTGCTCGTGCTGCTGCTGACGCTGCTGCGGTTGTCGCTGATGACGCTGCAGATGCTGTCGATGCTGCGACCAATTGTATTGCCGCTGGCATTGCTGCTATTAGTCACACTAAAGCTGTCGATGATTATGAAGCTGCCAACACTTTATATATCAACCACCCAGAGTATTATGCTGCTCTAGTGACGGCTAGTGAGGAAGCTTGTGCTGCCAGTCGTGCAGCCAAATTTGCTGCCAAAGAGGCTTATGGTTCCAAGTATGCCGTTATCGCCGCTGGCAGTAGGACCCTAAAAAGGTGATAGAATGTCTCCAAACTATTTGTCAAAATTCTCTTTTGCTGCTCATACTGCCGTTTTCATTAGCTTTAAAAATCCAGCTTTTGAAGCCTTTATATTAAACCTTTACAATTAATTAGTTTCAATAGGAAGGCTGATCTCAGGACCCACAAAAATCGTCCTTCGAAAGATACTTTTTTTTTAATTTATTGTTAATTAAAATGCAAAAATTGTGATGGTTTCTATATCAATCCTAAAAGAAACATGGAGGCGAAAGAAATCTCCACAGGCACGAAGTCTAAAGATGATGCACGTCCAACAAAGGAACCAAAGAATTCCGAGGACTATTCAGGCACGAAGTCTAAAGATGATGCACATCCAACAAAGGAACCAAAGAATTCCGAGGGGAAAAAG

mRNA sequence

TTTATCACGGAAAATATTCCCAACTTTCCTGCCACTTGTCGAATCGTTGATGATGCCAGTTCCAAAATTTCCTTAGCCCGTGGGGCTGCCAAAGTTGCACGTAGTTGTGCTTCTGTTGCTCGTGATCGTGCTTCTACTGCCCTCTGCATCGACAAGGCCAATGCTGCTCGTGCTGCTGCTGACGCTGCTGCGGTTGTCGCTGATGACGCTGCAGATGCTGTCGATGCTGCGACCAATTGTATTGCCGCTGGCATTGCTGCTATTAGTCACACTAAAGCTGTCGATGATTATGAAGCTGCCAACACTTTATATATCAACCACCCAGAGTATTATGCTGCTCTAGTGACGGCTAGTGAGGAAGCTTGTGCTGCCAGTCGTGCAGCCAAATTTGCTGCCAAAGAGGCTTATGGTTCCAAGTATGCCGTTATCGCCGCTGGCAGTAGGACCCTAAAAAGAAACATGGAGGCGAAAGAAATCTCCACAGGCACGAAGTCTAAAGATGATGCACGTCCAACAAAGGAACCAAAGAATTCCGAGGACTATTCAGGCACGAAGTCTAAAGATGATGCACATCCAACAAAGGAACCAAAGAATTCCGAGGGGAAAAAG

Coding sequence (CDS)

TTTATCACGGAAAATATTCCCAACTTTCCTGCCACTTGTCGAATCGTTGATGATGCCAGTTCCAAAATTTCCTTAGCCCGTGGGGCTGCCAAAGTTGCACGTAGTTGTGCTTCTGTTGCTCGTGATCGTGCTTCTACTGCCCTCTGCATCGACAAGGCCAATGCTGCTCGTGCTGCTGCTGACGCTGCTGCGGTTGTCGCTGATGACGCTGCAGATGCTGTCGATGCTGCGACCAATTGTATTGCCGCTGGCATTGCTGCTATTAGTCACACTAAAGCTGTCGATGATTATGAAGCTGCCAACACTTTATATATCAACCACCCAGAGTATTATGCTGCTCTAGTGACGGCTAGTGAGGAAGCTTGTGCTGCCAGTCGTGCAGCCAAATTTGCTGCCAAAGAGGCTTATGGTTCCAAGTATGCCGTTATCGCCGCTGGCAGTAGGACCCTAAAAAGAAACATGGAGGCGAAAGAAATCTCCACAGGCACGAAGTCTAAAGATGATGCACGTCCAACAAAGGAACCAAAGAATTCCGAGGACTATTCAGGCACGAAGTCTAAAGATGATGCACATCCAACAAAGGAACCAAAGAATTCCGAGGGGAAAAAG

Protein sequence

FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAADAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEEACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSEDYSGTKSKDDAHPTKEPKNSEGKK
Homology
[Close]
BLAST of CsaV3_7G023110 vs. NCBI nr
Match: XP_031744842.1 (uncharacterized protein LOC105436127 isoform X1 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 9.3e-96
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0 

Query: 1   FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA 60
           FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA
Sbjct: 261 FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA 320

Query: 61  DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE 120
           DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE
Sbjct: 321 DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE 380

Query: 121 ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED 180
           ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED
Sbjct: 381 ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED 440

Query: 181 YSGTKSKDDAHPTKEPKNSEGKK 204
           YSGTKSKDDAHPTKEPKNSEGKK
Sbjct: 441 YSGTKSKDDAHPTKEPKNSEGKK 463

[Close]
BLAST of CsaV3_7G023110 vs. NCBI nr
Match: KAE8646118.1 (hypothetical protein Csa_015884, partial [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 9.3e-96
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0 

Query: 1   FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA 60
           FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA
Sbjct: 1   FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA 60

Query: 61  DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE 120
           DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE
Sbjct: 61  DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE 120

Query: 121 ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED 180
           ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED
Sbjct: 121 ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED 180

Query: 181 YSGTKSKDDAHPTKEPKNSEGKK 204
           YSGTKSKDDAHPTKEPKNSEGKK
Sbjct: 181 YSGTKSKDDAHPTKEPKNSEGKK 203

[Close]
BLAST of CsaV3_7G023110 vs. NCBI nr
Match: XP_031744843.1 (uncharacterized protein LOC105436127 isoform X2 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 9.3e-96
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0 

Query: 1   FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA 60
           FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA
Sbjct: 143 FITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARAAA 202

Query: 61  DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE 120
           DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE
Sbjct: 203 DAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTASEE 262

Query: 121 ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED 180
           ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED
Sbjct: 263 ACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNSED 322

Query: 181 YSGTKSKDDAHPTKEPKNSEGKK 204
           YSGTKSKDDAHPTKEPKNSEGKK
Sbjct: 323 YSGTKSKDDAHPTKEPKNSEGKK 345

[Close]
BLAST of CsaV3_7G023110 vs. NCBI nr
Match: KAE8646115.1 (hypothetical protein Csa_016498 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 8.2e-84
Identity = 188/205 (91.71%), Postives = 189/205 (92.20%), Query Frame = 0 

Query: 2   ITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARA--- 61
           ITEN PNFPATCRIVDDASS  SLARGAAKVARSCASVARDRASTALCIDKANAARA   
Sbjct: 49  ITENTPNFPATCRIVDDASSNTSLARGAAKVARSCASVARDRASTALCIDKANAARAAAD 108

Query: 62  AADAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTAS 121
           AADAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHP+         
Sbjct: 109 AADAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPD--------- 168

Query: 122 EEACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNS 181
           EEACAASRAAKFAAKEAYG KYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNS
Sbjct: 169 EEACAASRAAKFAAKEAYGPKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNS 228

Query: 182 EDYSGTKSKDDAHPTKEPKNSEGKK 204
           EDYSGTKSKDDAHPTKEPKNSEGKK
Sbjct: 229 EDYSGTKSKDDAHPTKEPKNSEGKK 244

[Close]
BLAST of CsaV3_7G023110 vs. NCBI nr
Match: XP_031744844.1 (uncharacterized protein LOC116405174 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 3.6e-71
Identity = 164/205 (80.00%), Postives = 179/205 (87.32%), Query Frame = 0 

Query: 2   ITENIPNFPATCRIVDDASSKISLARGAAKVARSCASVARDRASTALCIDKANAARA--- 61
           +TEN  NFPATCR V D     SLAR +AK+AR+ ASVARDRASTALCIDKANAARA   
Sbjct: 52  LTENTSNFPATCRFVADGRINASLARWSAKIARNRASVARDRASTALCIDKANAARAAAD 111

Query: 62  AADAAAVVADDAADAVDAATNCIAAGIAAISHTKAVDDYEAANTLYINHPEYYAALVTAS 121
           AADAAAVVADDAADAVD AT+CIAAGI A SHTKAVDDYEAANTLY+NHP+YYAAL+TA 
Sbjct: 112 AADAAAVVADDAADAVDTATDCIAAGIVAFSHTKAVDDYEAANTLYMNHPDYYAALMTAI 171

Query: 122 EEACAASRAAKFAAKEAYGSKYAVIAAGSRTLKRNMEAKEISTGTKSKDDARPTKEPKNS 181
           ++A AAS AA+ AA+EA  +KYA++  G RTLKRNMEAKEISTGTKSKDDARPTKEPKNS
Sbjct: 172 KDAGAASGAARSAAEEADAAKYALMDTGKRTLKRNMEAKEISTGTKSKDDARPTKEPKNS 231

Query: 182 EDYSGTKSKDDAHPTKEPKNSEGKK 204
           EDYSGTKSKDDAHPTKEPKNSEGKK
Sbjct: 232 EDYSGTKSKDDAHPTKEPKNSEGKK 256

The following BLAST results are available for this feature:
BLAST of CsaV3_7G023110 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744842.19.3e-96100.00uncharacterized protein LOC105436127 isoform X1 [Cucumis sativus][more]
KAE8646118.19.3e-96100.00hypothetical protein Csa_015884, partial [Cucumis sativus][more]
XP_031744843.19.3e-96100.00uncharacterized protein LOC105436127 isoform X2 [Cucumis sativus][more]
KAE8646115.18.2e-8491.71hypothetical protein Csa_016498 [Cucumis sativus][more]
XP_031744844.13.6e-7180.00uncharacterized protein LOC116405174 [Cucumis sativus][more]
BLAST of CsaV3_7G023110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G023110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G023110 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G023110.1CsaV3_7G023110.1mRNA