CsaV3_7G023000 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G023000
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 11914641 .. 11915122 (+)
RNA-Seq ExpressionCsaV3_7G023000
SyntenyCsaV3_7G023000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCTTCAGCGCTGTACGTTGCCAACAAGAATTTGGGGCCGAGATTCTGGCACTTTCCTTAACCTCCTAAGGCTTGTGCATTCAGGTGCTCCTAAATTTTGAATATATCGCAATTTTGATATTCCTAAATTACCATCTTTTTAGGTCCATTGCTTCATTTAAGCGGACTACGCTTTGCCCTTCTTTTCTTTTTTATTTACTACAATCATTTTCTTGAACAGATTGGTGTTTGGAATATATGATTTTTCGAATGTTCTTCCTTTTATTAGTTCACTCTCAACCCAGGTAGAGACCATCCTTGTTCTAATGGTTGGAGTATTGTTAATACATGGATTTTTAGTCATATTCCAGTTTTAAAATATGTTAATACGTCGGTAGAGGATTAATCGACCACTTGGCCTTGATAATTTGATTACAATTATTTTTTAATTGCAGAAATAGCGGCTGGCAGAATTTGGAGGACTCTTTTGCAACTGCGTGCA

mRNA sequence

CGTCTTCAGCGCTGTACGTTGCCAACAAGAATTTGGGGCCGAGATTCTGGCACTTTCCTTAACCTCCTAAGGCTTGTGCATTCAGATTGGTGTTTGGAATATATGATTTTTCGAATGTTCTTCCTTTTATTAGTTCACTCTCAACCCAGAAATAGCGGCTGGCAGAATTTGGAGGACTCTTTTGCAACTGCGTGCA

Coding sequence (CDS)

CGTCTTCAGCGCTGTACGTTGCCAACAAGAATTTGGGGCCGAGATTCTGGCACTTTCCTTAACCTCCTAAGGCTTGTGCATTCAGATTGGTGTTTGGAATATATGATTTTTCGAATGTTCTTCCTTTTATTAGTTCACTCTCAACCCAGAAATAGCGGCTGGCAGAATTTGGAGGACTCTTTTGCAACTGCGTGCA

Protein sequence

RLQRCTLPTRIWGRDSGTFLNLLRLVHSDWCLEYMIFRMFFLLLVHSQPRNSGWQNLEDSFATACX
Homology
[Close]
BLAST of CsaV3_7G023000 vs. NCBI nr
Match: KAE8646112.1 (hypothetical protein Csa_015950, partial [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  RLQRCTLPTRIWGRDSGTFLNLLRLVHSDWCLEYMIFRMFFLLLVHSQPRNSGWQNLEDS 60
          RLQRCTLPTRIWGRDSGTFLNLLRLVHSDWCLEYMIFRMFFLLLVHSQPRNSGWQNLEDS
Sbjct: 1  RLQRCTLPTRIWGRDSGTFLNLLRLVHSDWCLEYMIFRMFFLLLVHSQPRNSGWQNLEDS 60

Query: 61 FATAC 66
          FATAC
Sbjct: 61 FATAC 65

[Close]
BLAST of CsaV3_7G023000 vs. ExPASy TrEMBL
Match: A0A0A0K918 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239580 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  RLQRCTLPTRIWGRDSGTFLNLLRLVHSDWCLEYMIFRMFFLLLVHSQPRNSGWQNLEDS 60
          RLQRCTLPTRIWGRDSGTFLNLLRLVHSDWCLEYMIFRMFFLLLVHSQPRNSGWQNLEDS
Sbjct: 33 RLQRCTLPTRIWGRDSGTFLNLLRLVHSDWCLEYMIFRMFFLLLVHSQPRNSGWQNLEDS 92

Query: 61 FATAC 66
          FATAC
Sbjct: 93 FATAC 97

The following BLAST results are available for this feature:
BLAST of CsaV3_7G023000 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646112.13.4e-31100.00hypothetical protein Csa_015950, partial [Cucumis sativus][more]
BLAST of CsaV3_7G023000 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G023000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9181.6e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239580 PE=4 SV=1[more]
BLAST of CsaV3_7G023000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G023000.1CsaV3_7G023000.1mRNA