CsaV3_7G021280 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G021280
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 9759812 .. 9760162 (+)
RNA-Seq ExpressionCsaV3_7G021280
SyntenyCsaV3_7G021280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTCCTTTGGACCTGTCTTACCGCGGAGTGAGCTTAGTCTTGAGCCTAAATTTGATCTTGCTACGTGGGTTAGGAGGCGTCTCCAGTCCCTTCGTACCAGGTGGTCGTATTCCTTATGCCTTTTCATTAATTGCCTGGGGACTGAAGAAGCAGAAACTGAAAAAGCAAGAGCTTCTGAATCTGCCACTGAAAGAAAAAGAACTACTGATCTCTCCTTCCTGCGAAAGTCATAATCAGATATTCATAAGATATAATAAGTATATAAAGCTCTGCGAATGGCGAAAGCTAATCAGAGAAGACCGCCTCAATGAACAAGTCAATGCCTACTACGCGGAGAAACTCTAA

mRNA sequence

ATGGATAGTCCTTTGGACCTGTCTTACCGCGGAGTGAGCTTAGTCTTGAGCCTAAATTTGATCTTGCTACGTGGGTTAGGAGGCGTCTCCAGTCCCTTCGTACCAGGTGGTCGTATTCCTTATGCCTTTTCATTAATTGCCTGGGGACTGAAGAAGCAGAAACTGAAAAAGCAAGAGCTTCTGAATCTGCCACTGAAAGAAAAAGAACTACTGATCTCTCCTTCCTGCGAAAGTCATAATCAGATATTCATAAGATATAATAAGTATATAAAGCTCTGCGAATGGCGAAAGCTAATCAGAGAAGACCGCCTCAATGAACAAGTCAATGCCTACTACGCGGAGAAACTCTAA

Coding sequence (CDS)

ATGGATAGTCCTTTGGACCTGTCTTACCGCGGAGTGAGCTTAGTCTTGAGCCTAAATTTGATCTTGCTACGTGGGTTAGGAGGCGTCTCCAGTCCCTTCGTACCAGGTGGTCGTATTCCTTATGCCTTTTCATTAATTGCCTGGGGACTGAAGAAGCAGAAACTGAAAAAGCAAGAGCTTCTGAATCTGCCACTGAAAGAAAAAGAACTACTGATCTCTCCTTCCTGCGAAAGTCATAATCAGATATTCATAAGATATAATAAGTATATAAAGCTCTGCGAATGGCGAAAGCTAATCAGAGAAGACCGCCTCAATGAACAAGTCAATGCCTACTACGCGGAGAAACTCTAA

Protein sequence

MDSPLDLSYRGVSLVLSLNLILLRGLGGVSSPFVPGGRIPYAFSLIAWGLKKQKLKKQELLNLPLKEKELLISPSCESHNQIFIRYNKYIKLCEWRKLIREDRLNEQVNAYYAEKL*
Homology
[Close]
BLAST of CsaV3_7G021280 vs. NCBI nr
Match: KAE8646030.1 (hypothetical protein Csa_016890 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 5.8e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MDSPLDLSYRGVSLVLSLNLILLRGLGGVSSPFVPGGRIPYAFSLIAWGLKKQKLKKQEL 60
           MDSPLDLSYRGVSLVLSLNLILLRGLGGVSSPFVPGGRIPYAFSLIAWGLKKQKLKKQEL
Sbjct: 1   MDSPLDLSYRGVSLVLSLNLILLRGLGGVSSPFVPGGRIPYAFSLIAWGLKKQKLKKQEL 60

Query: 61  LNLPLKEKELLISPSCESHNQIFIRYNKYIKLCEWRKLIREDRLNEQVNAYYAEKL 117
           LNLPLKEKELLISPSCESHNQIFIRYNKYIKLCEWRKLIREDRLNEQVNAYYAEKL
Sbjct: 61  LNLPLKEKELLISPSCESHNQIFIRYNKYIKLCEWRKLIREDRLNEQVNAYYAEKL 116

The following BLAST results are available for this feature:
BLAST of CsaV3_7G021280 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646030.15.8e-58100.00hypothetical protein Csa_016890 [Cucumis sativus][more]
BLAST of CsaV3_7G021280 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021280 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021280 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G021280.1CsaV3_7G021280.1mRNA