CsaV3_7G018460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G018460
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 8388125 .. 8388670 (-)
RNA-Seq ExpressionCsaV3_7G018460
SyntenyCsaV3_7G018460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGAGGTGGCAGAGCAAGCGATAAGAAAAAAAAAGGTTTTGAAAGAAGAAAAAACAGTGAATTCCCGCTTGTGAAAGGCCAAAATTTTTGTCAATTACAATATTTAAGAACCAAAATTGGTATCGATTACAACTTTCAGGACACAGAAAGACCAAATCACCTGGAATATGTATGCTCATTATACAATGCTTCTCCCCCAATCTTTCAAAAGATTTACAAAGAGTTCTGTTATAAGTTTCAAACGAGACCTTTCAGTGAGAGCATGCGACTGCTAATAGCTCACCACCTTTTGAATGACCATGCAGAGACATGGCAGGTAAGAATTCCATCTCTAGTCTTGCCAAAGAATTTCAGCTGTCATTGAACTCTAAACTGGAGTAGTTCATAATCTGAGTATGGCTACCAGAACGACAAAAGAATGGCAAAATTTATGTTCATAAACGCCCTGCATCGCAACCAGAACATTCACGCCATACCTTCACTTCAAGTTAGTAGATGGAAGAACCCCGAGGTGCAATCAAGTCATTTCACTTTGGAGTAA

mRNA sequence

ATGGCTCGAGGTGGCAGAGCAAGCGATAAGAAAAAAAAAGGTTTTGAAAGAAGAAAAAACAGTGAATTCCCGCTTGTGAAAGGCCAAAATTTTTGTCAATTACAATATTTAAGAACCAAAATTGGTATCGATTACAACTTTCAGGACACAGAAAGACCAAATCACCTGGAATATGTATGCTCATTATACAATGCTTCTCCCCCAATCTTTCAAAAGATTTACAAAGAGTTCTGTTATAAGTTTCAAACGAGACCTTTCAGTGAGAGCATGCGACTGCTAATAGCTCACCACCTTTTGAATGACCATGCAGAGACATGGCAGAACGACAAAAGAATGGCAAAATTTATGTTCATAAACGCCCTGCATCGCAACCAGAACATTCACGCCATACCTTCACTTCAAGTTAGTAGATGGAAGAACCCCGAGGTGCAATCAAGTCATTTCACTTTGGAGTAA

Coding sequence (CDS)

ATGGCTCGAGGTGGCAGAGCAAGCGATAAGAAAAAAAAAGGTTTTGAAAGAAGAAAAAACAGTGAATTCCCGCTTGTGAAAGGCCAAAATTTTTGTCAATTACAATATTTAAGAACCAAAATTGGTATCGATTACAACTTTCAGGACACAGAAAGACCAAATCACCTGGAATATGTATGCTCATTATACAATGCTTCTCCCCCAATCTTTCAAAAGATTTACAAAGAGTTCTGTTATAAGTTTCAAACGAGACCTTTCAGTGAGAGCATGCGACTGCTAATAGCTCACCACCTTTTGAATGACCATGCAGAGACATGGCAGAACGACAAAAGAATGGCAAAATTTATGTTCATAAACGCCCTGCATCGCAACCAGAACATTCACGCCATACCTTCACTTCAAGTTAGTAGATGGAAGAACCCCGAGGTGCAATCAAGTCATTTCACTTTGGAGTAA

Protein sequence

MARGGRASDKKKKGFERRKNSEFPLVKGQNFCQLQYLRTKIGIDYNFQDTERPNHLEYVCSLYNASPPIFQKIYKEFCYKFQTRPFSESMRLLIAHHLLNDHAETWQNDKRMAKFMFINALHRNQNIHAIPSLQVSRWKNPEVQSSHFTLE*
Homology
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BLAST of CsaV3_7G018460 vs. NCBI nr
Match: KAE8645974.1 (hypothetical protein Csa_015460 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 3.0e-83
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MARGGRASDKKKKGFERRKNSEFPLVKGQNFCQLQYLRTKIGIDYNFQDTERPNHLEYVC 60
           MARGGRASDKKKKGFERRKNSEFPLVKGQNFCQLQYLRTKIGIDYNFQDTERPNHLEYVC
Sbjct: 1   MARGGRASDKKKKGFERRKNSEFPLVKGQNFCQLQYLRTKIGIDYNFQDTERPNHLEYVC 60

Query: 61  SLYNASPPIFQKIYKEFCYKFQTRPFSESMRLLIAHHLLNDHAETWQNDKRMAKFMFINA 120
           SLYNASPPIFQKIYKEFCYKFQTRPFSESMRLLIAHHLLNDHAETWQNDKRMAKFMFINA
Sbjct: 61  SLYNASPPIFQKIYKEFCYKFQTRPFSESMRLLIAHHLLNDHAETWQNDKRMAKFMFINA 120

Query: 121 LHRNQNIHAIPSLQVSRWKNPEVQSSHFTLE 152
           LHRNQNIHAIPSLQVSRWKNPEVQSSHFTLE
Sbjct: 121 LHRNQNIHAIPSLQVSRWKNPEVQSSHFTLE 151

The following BLAST results are available for this feature:
BLAST of CsaV3_7G018460 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645974.13.0e-83100.00hypothetical protein Csa_015460 [Cucumis sativus][more]
BLAST of CsaV3_7G018460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G018460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G018460 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G018460.1CsaV3_7G018460.1mRNA