CsaV3_7G011390 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G011390
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 6168102 .. 6173121 (+)
RNA-Seq ExpressionCsaV3_7G011390
SyntenyCsaV3_7G011390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTCTCCAGCCATTCCACCACAGCATCGACGTGGCACGCCTCGCAGACAGCTCCGATCTGTCTCCAGCCATTCCACCACAGCATCGGCGTCGCGCCGATTAGTCGCAGCCTCGGCATCGCAGGTGTCCATTTCCGCTCCGATCCGTCTCCATCCGCGAAGCACCAGTCTTCCTCTGTCGTTCCAAGCCGCACGCGACTACGCCGCTCCGATCTGTCTCCAATCTACGCCGCTCCGATCTGTCTCCATCCGCGAAGCACCAGTCTTCCTCTGTCGTTCCAAGCCGCACGCGACTTCTCTTCCAGCCGTGAGTGCAAGACGACGTCTACCGTCCGACGCCGCCCACCAGATCTGACGAATCCTTCAGCCGTTTGTCTTCAGATCTGACGAATCTTTCAGCCGTTTGTCTTCAAGTTTTTTTTGTCTCCGTTCCCAGCCGTGCACCCCTGAATCCAGTCGCCGCAACCCAGCCGTGCACCCCTGAATCCAGTCGCCGCAACCCAGCCGTGAACCCCTGAATCCAGTCGCCGCGACCCAGCTGTGAAGACGCTCACCTGCCACGAATCCCAGTCTTGCAAAGCAAATCTCAGCCGCCAAATACAGTGAAACCCAGATCTGACGAATCCAGTCACGAATCAGTCAAAACTCGGTCGAAAATCCGCATTGTTAACCCCAAATCAAAATGGAGAGAGACCATATCTTTAGACCCATTTCTACCATACTTGATGGTACAAATTATATCACATGGGCAAATCAAATGAAAAGTTTTCTTATTGGAAGAAAACTATGGCGCATTGTAACTGGCGACATCACCAAACCAACTGCAAAGGAAGGGGATAACACATTCATTGAACGTCTCGAAGATTGGGACAGTAAAAATCATCAAATTATCACCTGGCTTGGTAACACCTCTATTCCCGCTATACATGCACAGTTTGATGCCTTTGATGATGCTAAAATATTATGGGATTTTTTGTCTACACGCTTCAAGTCTATTGGTTTAGCCCATTATTACCAACTGCACAGTACACTTGTAAATCTAAATCAAGATTCTGGTCAGTCTGTTAATGAATATTTGGCAGTTCTTCAACCCATTTGGACTCAACTTGACCAAGCGAACATCAGCAAAGATCATCTTCGCCTTATTAAAGTCCTTATGGGATTACGTCCAGAATATGAATCTGTTAGAGCTGCTTTACTACACCGGAATCCCTTACCCTCATTAGATGCAGCTATTCAAGAAATTCTGTTTGAAGAAAAGCGTCTTGGCATCAACTCTACTAAACAATCTGATGTTGTCCTTGCTAGCACATACACTCCCAACAGAGCCGCAAATATGTTTTGTAAGAATTGTAAGCTCTCTGGTCACAAATTTAGTAACTGTCCTAAAATAGAGTGCAGGTACTGCCATAAACATGGCCACATTCTGGATAACTGCCCTACCAGACCACCCCGACCTCCTAGCACTTCCACAAAAGAGAAAATTTTTACCAAACATGGTTCCTCATCTGTTGTTGCTGCGACCTCGGATGATTCATCCCTCATTCAGATAAGTGATCTTCAGAGCTTATTGAATCAACTAATTTCATCATCCTCCGCTCTTGCTGTTTCATCAGGTAATCGATGGCTTCTTGATTCTGCCTGTTGTAATCATATGACCTCTGACTCTTCTCTTATGTCTACTTCTAGCCCTACAAAATCTTTACCTCCTATTTATGCTGCTGATGGTAATTGTATGAACATCTCTCATACTGGTACCATTGATACTCCCAGTTTACATCTTCCCCATACTTACTGTGTTCCTAACCTGACCTTTAATCTAGTGTCTGTTGGTCAATTATGTGATCTTGGCTTAAATGTTTCATTTTCTCCCAATGGTTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGAACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCACATCACTTCGGGTTTCATCTCCTTCTTCCATCTCTGCTTCGGTCACTGATTCTGACACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCCTCTGAAAAACTTCGTCATTTAATTTCTGTTAACAATTTGACTAATCTTACTAAATTTGTTCCTTTTAATTGTTTGAATTGCAAACTTGCTAAACAACCTGCCTTATCTTTTTCTCAATCCATCTCTAATTGTGATAAACCTTTTGATTTAGTGCATTCTGATATTTGGGGTCCTGCCCCAATTACTACTGTTCATGGTTATCGCTACTATGTTTTATTCATTGATGACTACTCTCGATTTACATGGATTTACTTTCTAAAACATCGTTCTGAATTATCTCGCACATATATTGAGTTTGCTAACATGATTCGCACTCAATTTTCCTCTCCCATCAAAATTCTTCGCACTGATAATGCTTTGGAATATAAAGATTCCATCCTTCTTTCTTTTCTTTCCCAACAGGGCACTATTGTTCAGCGCTCTTGCCCTCATACCTCTCAACAAAATGGACGTGCTGAGCGCAAACATCGTCACATTCTTGACTCAGTACGTGCCCTCCTTCTTTCTGCCTCTTGTCCAGAAAAATTCTGGGGTGAAGCTGCCCTTACATCAGTATATACAATCAATCGTCTCCCTTCCTCTGTCCTTCAAAACACCTCTCCGTTCGAAAAACTATATGGTATTTCTCCCGACTATTCTAAACTCAAAGTTTTTGGTAGTGCCTGCTTCGTTCTGTTACATCCTCATGAACACAATAAACTTGAACCACGTGCCCGTCTCTGTTGCTTCCTTGGCTATGGCACCGAACACAAAGGATTTCGTTGTTGGGACCCTCTTTCCAACCGACTCCGGATATCTCGGCATGTCACTTTTTGGGAACACACTATGTTCTCTCGTTTGTCCTCCTTCCACACCTCTTTCTCTAGTCCTCAATCTTTCTTTACAAATACATCTGTTGACCTTTTTCCTCTCTCTGAACCCACCTTGGATACTGAGCTTGCACAATCTTCACCTGCTACTGCAAATCCGGATCCACCGTCTGTCTCCGATGATGTTCCTGAATCGCCACCTGCTACTCCTCTTCGTCGCTCTACCCGGGTAAGAGAACCTCCCAGTCATCTCACTGATTACCATTGTTTTTCTACCATTGTTTCCCTTGTTGAACCCACCTCTTATCAAGAGGCCAGTACTAACCCAGTATGGCAGAAAGCAATGGATGAAGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGATTTACCTCCCGGTAAAAGACCCATTGGTTGCAAATGGATTTACAAAATCAAAACTCACTCTGATGGAACTATTGAACGTTATAAAGCTCGGCTTGTTGCAAAAGGATACTCACAAGAATATGGGATTGACTATGAAGAAACATTTGCCCCTGTTGCCCGGATGACATCTGTTCGCAGCTTGTTAGCTGTTGCTGCTGCCAAACAGTGGCCTCTTCTTCAGATGGATGTCAAAAATGCATTTCTTAACGGCAACCTATCTGAAGAAGTGTATATGAAGCCACCTCAGGGAACTTCTCCTCCTCCCAACAAGGTGTGTCTCCTTCGTCGCGCTCTCTATACGGTCTAAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCCACCATTACTCAACTTGGATTTACCTCCAGCTCTCACGACAATGCCCTTTTTACACGACAGACAACTCATGGTATTGTTCTTCTTCTTCTTTATGTTGATGATATGATTATTACTGGTAATGATCAACAGGCCATATCCGACCTACAACAATATCTTGGTCAACATTTTGAGATGAAAGACCTTGGATCTCTCAATTACTTTCTCGGTCTTGAAGTCTCTCACCGTTCAGATGGTTATCTGTTATCTCAAGCGAAATATGCATCTGATCTAATAGCGCGATCAGGAATTACAGACTCCACCACATCTTCAACACCGTTAGATCCTCATGTCCACCTAACTCCGTTTGATGGTGTTCCTCTTGACGATGCAAGCTTGTATCGGCAACTTGTTGGCAGTCTTATATACCTAACAGTAACTCGCCCAGATATTATATGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTCGAACAATTCATTTCACTGCTGTTCTACGCATACTTCGCTATGTCAAAGGCACCTTGGGACATGGTCTTCAATTCTCATCTCAGTCTTCCCTTGTGTTGTCGGGATATTCTGATGCTGATTGGGCGGGGGATCCTACTGATCGACGATCCACTACAGGATACATTTTTTACTTAGGTGATTCTCTCATCTCATGGCGTAGTAAGAAACAAAGTGTTATATCTCGTTCCAGTACGGAATCTGAATATCGTGCTCTGGCTGATGCTACAGCTGAACTTATATGGCTTCGGTGGCTCCTTGCCGATATGGGTGTCCCTCAACAGGGTCCTACCCTCCTCCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTTTCATGAACGTACAAAACACATTGAAAATGACTGTCACTTTGTTCGTCACCACCTCCTAAGCAACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATATCTTCACCAAAGCCTTGCCATCTAATCGATTCTGTCACTTACTTACCAAACTCAAGTTGATCGCTACTCTACCACCTTGAGTTTGAGGGAGGGTATTAATGTAAATTCTGTAAATGCAATTTATGCATAATTTTCCTAATACTCTTGTATAAATACACTACTTTGATCAATAAACAAAGTGAGGGAATATTCTTCAGCATATCCTTCCATATATATATATATATATATATTCATACTTATTTATCAAAAATAAAAATATAAGGGAATATTTTCTCGTGGGCAATGCGGGTTTTCGTAGAGAATCCTTGTCCGGTTGCTCTTGGAGAAATTTGTGAGAATGGAAATGTGGTATGGGATAAGAGGGTGGGGACGGGAAAGGAGAGTGGCATCTTCGTTCCACTACCCCGCTCTGCTCGGTGA

mRNA sequence

CTGTCTCCAGCCATTCCACCACAGCATCGACGTGGCACGCCTCGCAGACAGCTCCGATCTAATCCTTGTCCGGTTGCTCTTGGAGAAATTTGTGAGAATGGAAATGTGGTATGGGATAAGAGGGTGGGGACGGGAAAGGAGAGTGGCATCTTCGTTCCACTACCCCGCTCTGCTCGGTGA

Coding sequence (CDS)

CTGTCTCCAGCCATTCCACCACAGCATCGACGTGGCACGCCTCGCAGACAGCTCCGATCTAATCCTTGTCCGGTTGCTCTTGGAGAAATTTGTGAGAATGGAAATGTGGTATGGGATAAGAGGGTGGGGACGGGAAAGGAGAGTGGCATCTTCGTTCCACTACCCCGCTCTGCTCGGTGA

Protein sequence

LSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR*
Homology
[Close]
BLAST of CsaV3_7G011390 vs. NCBI nr
Match: KGN44032.1 (hypothetical protein Csa_011862 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 7.9e-27
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  LSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 60
          +SPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR
Sbjct: 1  MSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 59

[Close]
BLAST of CsaV3_7G011390 vs. ExPASy TrEMBL
Match: A0A0A0K6Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G115350 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-27
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  LSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 60
          +SPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR
Sbjct: 1  MSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 59

The following BLAST results are available for this feature:
BLAST of CsaV3_7G011390 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44032.17.9e-2798.31hypothetical protein Csa_011862 [Cucumis sativus][more]
BLAST of CsaV3_7G011390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6Y23.8e-2798.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G115350 PE=4 SV=1[more]
BLAST of CsaV3_7G011390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G011390.1CsaV3_7G011390.1mRNA