CsaV3_7G011300 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G011300
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 6013722 .. 6014222 (+)
RNA-Seq ExpressionCsaV3_7G011300
SyntenyCsaV3_7G011300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGCCTCACATCTCCCTCTCCTTTTCGCTCGTCCGCCAACCACCATCACCGCCCAAATCTTCTCATCCCGCCCTCGCCGCTGCACTATTTGCCTGAAGTCGTCGTCCGTTCAGGTTACAAAGTCGTCGCGTACTGTTTCTGTTCGTGCTGCATCCCACTGCTTCCTCCAGCCGTCGAACATCTCCTCTCTCCCTTCTCCTTCATTTTTCTGGCGCCGCCGTTACCCAAACCCCCAACTGCTCGTCGCGGTTCGTCAGCGCCTCCCGGCTGTCCAGATCCGCAACCACTCGAGCCACTTCATCACATTGTCCGTCATCTTCTGCTAGTCGCACTGCTTGAAATCCGCGTTGCTCAGCTTGCACAAGTCTTCTGCCTCACGTTTTGTGCCGTCGTGACGTTCGCAACCGTACCACAGCCGCCACGACTTTCCATATTCCAACTGAGGGTTTTGTTCCGCTTTCGTCAACCATCTGCACCACCGCGTCTGTTCGTCGGCGGACA

mRNA sequence

GCCTCACATCTCCCTCTCCTTTTCGCTCGTCCGCCAACCACCATCACCGCCCAAATCTTCTCATCCCGCCCTCGCCGCTGCACTATTTGCCTGAAGTCGTCGTCCGTTCAGGTTACAAAGTCGTCGCGTACTGTTTCTGTTCGTGCTGCATCCCACTGCTTCCTCCAGCCGTCGAACATCTCCTCTCTCCCTTCTCCTTCATTTTTCTGGCGCCGCCGTTACCCAAACCCCCAACTGCTCGTCGCGGTTCGTCAGCGCCTCCCGGCTGTCCAGATCCGCAACCACTCGAGCCACTTCATCACATTGTCCGTCATCTTCTGCTA

Coding sequence (CDS)

GCCTCACATCTCCCTCTCCTTTTCGCTCGTCCGCCAACCACCATCACCGCCCAAATCTTCTCATCCCGCCCTCGCCGCTGCACTATTTGCCTGAAGTCGTCGTCCGTTCAGGTTACAAAGTCGTCGCGTACTGTTTCTGTTCGTGCTGCATCCCACTGCTTCCTCCAGCCGTCGAACATCTCCTCTCTCCCTTCTCCTTCATTTTTCTGGCGCCGCCGTTACCCAAACCCCCAACTGCTCGTCGCGGTTCGTCAGCGCCTCCCGGCTGTCCAGATCCGCAACCACTCGAGCCACTTCATCACATTGTCCGTCATCTTCTGCTA

Protein sequence

ASHLPLLFARPPTTITAQIFSSRPRRCTICLKSSSVQVTKSSRTVSVRAASHCFLQPSNISSLPSPSFFWRRRYPNPQLLVAVRQRLPAVQIRNHSSHFITLSVIFCX
Homology
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BLAST of CsaV3_7G011300 vs. NCBI nr
Match: KAE8645898.1 (hypothetical protein Csa_023729, partial [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 1.7e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   ASHLPLLFARPPTTITAQIFSSRPRRCTICLKSSSVQVTKSSRTVSVRAASHCFLQPSNI 60
           ASHLPLLFARPPTTITAQIFSSRPRRCTICLKSSSVQVTKSSRTVSVRAASHCFLQPSNI
Sbjct: 1   ASHLPLLFARPPTTITAQIFSSRPRRCTICLKSSSVQVTKSSRTVSVRAASHCFLQPSNI 60

Query: 61  SSLPSPSFFWRRRYPNPQLLVAVRQRLPAVQIRNHSSHFITLSVIFC 108
           SSLPSPSFFWRRRYPNPQLLVAVRQRLPAVQIRNHSSHFITLSVIFC
Sbjct: 61  SSLPSPSFFWRRRYPNPQLLVAVRQRLPAVQIRNHSSHFITLSVIFC 107

The following BLAST results are available for this feature:
BLAST of CsaV3_7G011300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645898.11.7e-51100.00hypothetical protein Csa_023729, partial [Cucumis sativus][more]
BLAST of CsaV3_7G011300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011300 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G011300.1CsaV3_7G011300.1mRNA