CsaV3_7G008940 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G008940
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 5556058 .. 5556262 (+)
RNA-Seq ExpressionCsaV3_7G008940
SyntenyCsaV3_7G008940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTTGATGAGATTATTATGGCCATTGTTGTTGTTAAGGAGTTAGGAGGAGTGAAGGTGGACGGAATTGCAGTAATGTTCATGGTTTATGGAGAAGATAAAGATTTTGATTTGTGGTTAAACCAATTTAGTGAAACTGTAATTAGCGCAGCGGCAAATTTGAGATTTAAGCGTTGTTGAACAAAGATTAGTAATGCATTAA

mRNA sequence

ATGATCGTTGATGAGATTATTATGGCCATTGTTGTTGTTAAGGAGTTAGGAGGAGTGAAGGTGGACGGAATTGCAGTAATGTTCATGGTTTATGGAGAAGATAAAGATTTTGATTTGTGGTTAAACCAATTTAGTGAAACTGTAATTAGCGCAGCGGCAAATTTGAGATTTAAGCGTTGTTGA

Coding sequence (CDS)

ATGATCGTTGATGAGATTATTATGGCCATTGTTGTTGTTAAGGAGTTAGGAGGAGTGAAGGTGGACGGAATTGCAGTAATGTTCATGGTTTATGGAGAAGATAAAGATTTTGATTTGTGGTTAAACCAATTTAGTGAAACTGTAATTAGCGCAGCGGCAAATTTGAGATTTAAGCGTTGTTGA

Protein sequence

MIVDEIIMAIVVVKELGGVKVDGIAVMFMVYGEDKDFDLWLNQFSETVISAAANLRFKRC*
Homology
[Close]
BLAST of CsaV3_7G008940 vs. NCBI nr
Match: KAE8645875.1 (hypothetical protein Csa_023856 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 4.1e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MIVDEIIMAIVVVKELGGVKVDGIAVMFMVYGEDKDFDLWLNQFSETVISAAANLRFKRC 60
          MIVDEIIMAIVVVKELGGVKVDGIAVMFMVYGEDKDFDLWLNQFSETVISAAANLRFKRC
Sbjct: 1  MIVDEIIMAIVVVKELGGVKVDGIAVMFMVYGEDKDFDLWLNQFSETVISAAANLRFKRC 60

The following BLAST results are available for this feature:
BLAST of CsaV3_7G008940 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645875.14.1e-23100.00hypothetical protein Csa_023856 [Cucumis sativus][more]
BLAST of CsaV3_7G008940 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G008940 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G008940 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G008940.1CsaV3_7G008940.1mRNA