CsaV3_7G008720 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G008720
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 5428571 .. 5428866 (-)
RNA-Seq ExpressionCsaV3_7G008720
SyntenyCsaV3_7G008720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACAATCGAGCAGATTCATGTACTGTCAAAGGCTATGTGAAGGGAAACTCCCTAGTGTCTATTGGTCAGATGTGATATTATCTCCCTGTTCAGAAACCAAGGCTTATACAAGGTGAAATTAAGAGGAAAACGGAAGATACTACTTCGTATATTGTATTTAGAGCAGTAACATTTGTGATTAATAATTTTCAGCCCTTGCCTGGTTTTTCTTTCTATTCACAGGATAATTGAGAGCATGAATCCTAGACGAACTAATTGTTTCTCAGCACATCCATCACAAAAGGACTTCCAACTG

mRNA sequence

TTACAATCGAGCAGATTCATGTACTGTCAAAGGCTATGTGAAGGGAAACTCCCTAGTGTCTATTGGTCAGATGTGATATTATCTCCCTGTTCAGAAACCAAGGCTTATACAAGGATAATTGAGAGCATGAATCCTAGACGAACTAATTGTTTCTCAGCACATCCATCACAAAAGGACTTCCAACTG

Coding sequence (CDS)

TTACAATCGAGCAGATTCATGTACTGTCAAAGGCTATGTGAAGGGAAACTCCCTAGTGTCTATTGGTCAGATGTGATATTATCTCCCTGTTCAGAAACCAAGGCTTATACAAGGATAATTGAGAGCATGAATCCTAGACGAACTAATTGTTTCTCAGCACATCCATCACAAAAGGACTTCCAACTG

Protein sequence

LQSSRFMYCQRLCEGKLPSVYWSDVILSPCSETKAYTRIIESMNPRRTNCFSAHPSQKDFQL
Homology
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BLAST of CsaV3_7G008720 vs. NCBI nr
Match: KAE8645868.1 (hypothetical protein Csa_017259, partial [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  LQSSRFMYCQRLCEGKLPSVYWSDVILSPCSETKAYTRIIESMNPRRTNCFSAHPSQKDF 60
          LQSSRFMYCQRLCEGKLPSVYWSDVILSPCSETKAYTRIIESMNPRRTNCFSAHPSQKDF
Sbjct: 1  LQSSRFMYCQRLCEGKLPSVYWSDVILSPCSETKAYTRIIESMNPRRTNCFSAHPSQKDF 60

Query: 61 QL 63
          QL
Sbjct: 61 QL 62

The following BLAST results are available for this feature:
BLAST of CsaV3_7G008720 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645868.12.5e-28100.00hypothetical protein Csa_017259, partial [Cucumis sativus][more]
BLAST of CsaV3_7G008720 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G008720 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G008720 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G008720.1CsaV3_7G008720.1mRNA