CsaV3_7G007350 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAACGAATCTTTGATCGTTGTAGGTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATAGTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAATTAAGCAAAAAAAAATAGGACAGAGCAAGACGTGAGTTTGTGAACAATATTGATGACAGCAATAAAGAAAGAAGTTTCAGAATTGTTCAACCATCTCTATAAATTTATCAATAAATCAGATGCTATTAGTGTGTATTTTGAGAAATTCAACTATATCAGCAAAGCTGGATGTGAGCATAAAAAATATTGCAAAGCTATATTTTGTTAATAGGCTTTTATCTTTAAAAAAAAGTATTGAAAATGTGATGTTTGTCCTTGTGAAATGAGAATTATATATAATAACATGCAGCATATTGTACATAAAGTAAACTGATCTCTCCGTCTCTTCCTTTCTTACGTTCCCCTCAGTTGTTTCGTTTGCTACCAACATATATATTCTTCCATTTCAATTTAATTTCCACACAATATCTAATTAAGCTACTTCTTCTGCATTTCTTTCCCTCTTTTTTCTCTATTTTCATTTAGTTTTGCAATGAGCTAGACAAGAAAATAAGAAGTAGAAAAAAGGGGTTATCGTAACTTCTCTTCAGATATTCGATCCATCACTTGCTGCCAAAGGGGTTCAAGGGATTTTCATCTTCGCTTCAGTGTCTTCCTTATTTTTCGTTTTTAATGGCTTTTGTTTGATTTTGATTGACTTAATTACTACTAGATTTTAGGTTTAGGGTTTGAATTTTTAGTTCCTGTGATAACATGGATATGTGTTTAATTATTTGTTCTAGTTTATGCGCTTCTTTTGTCAATCTTTTCGGAATTTTCTTGTTTCTATATGGTCTTGGTATATATTTATGAAAAACTATATAAGGATGTTGTTGGTGATGGAAGAGAGAAAGATCACAAAAGAGATTTTTGGTGTTGTGCTTAAGATTTTGTTGACGGTATTTTGGTGGTTGTTTGTTTGCTGTTTTGGAAGGTATTTTTATTTTATAAAAAATAATATAAATTTCGACGCACTAATTGCATCAGAGAGTTGTATACGTCCATAGTTGTCGAGAGTTGTATAGGATCTCCCAACGCTATATTTCTCAAATGTTGGAAAAGCCTCTCCCGACCTGCATTTATGCGTACGATTTTGTGTCTGTTGATCTATAATTTTTTGTAGCGATAATGTTTTCAATTTTTTTTTCTTTTTTTACTTTTTGCTTTCAAATGTAGCATAACTAATCTAAATTATATTTACCAACATAGCATTAATAGAAGGTGATAGAGATATATATAGACTACTATGATCTATTCTAAATTTTTGTTATACTGAGTTTGTAGATTTTTTATTTTATTTTATTTTTGGAGTTTTGTTGTTTAATTAACAATTTTTTTTGTGAAGAAAATAGACTTTGATTGGTTGAGCTTAAATTGTATCTTTGAGTTTTGTTTGGAAGGGTCAAGCATAATTGATGTGTGTTATTTCATTATTTAAAAAAAATGAATATATATATATACATATTTGAATATGTTGTTTCTTGTTTAGGAGATTTGAATCCGTGGGAATGAAAAATGGTGCGAATAATGATCAAGTTTCAAATGAAGTAGTGATTAGTGAGATTAAACCAAATCATTGGGGTGATACTGTGATATCAATCAAGAGCAAGCTGGAACAACTGCCTGTTGTTAATAAAGAATGCAAGATTTATAGAGTTCCCAAATTGCTATGTCAAATGAAAAAGACGACGTATGTCCCTCAAGTCATTTCTATCGGCCCTTTTCATCATGGTTCTAAAGATTTGAATGCTACAGAACCTTATAAGCTTCAAGGTCTTCGTAACTTTCTACGTCGTCTCGATAATCATAAGGAGAAATCATTGGAGGAGCTTGTGAAAATAGCTCGATCTTGGATAGAAGAAGCCCGTAGTTGTTATGTCGATCCGATAGACATGGATGACTACGAGTTTGTTAAGATGATGCTTGTGGATGGTTGTTTCATAGTAGAATTTTTTATACTTGTATACAGCCAATATACTACTTCAAATGATCATAAGTTCCCTCAAATTGATCCAAACGCTGGCCTTCTATTTTATCAAGGAATAATTCCTGACATGTATTTTGACTTGATAAAGCTCGAAAATCAACTTCCTTTCTTCATTCTCCAACGCTTGTTTGAGCTAATGCCAAAAGAAAACAACCCCAAATCTCTAATTCCGAGAGAATGA ATGGCCGAACGAATCTTTGATCGTTGTAGGTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATAGTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGAGATTTGAATCCGTGGGAATGAAAAATGGTGCGAATAATGATCAAGTTTCAAATGAAGTAGTGATTAGTGAGATTAAACCAAATCATTGGGGTGATACTGTGATATCAATCAAGAGCAAGCTGGAACAACTGCCTGTTGTTAATAAAGAATGCAAGATTTATAGAGTTCCCAAATTGCTATGTCAAATGAAAAAGACGACGTATGTCCCTCAAGTCATTTCTATCGGCCCTTTTCATCATGGTTCTAAAGATTTGAATGCTACAGAACCTTATAAGCTTCAAGGTCTTCGTAACTTTCTACGTCGTCTCGATAATCATAAGGAGAAATCATTGGAGGAGCTTGTGAAAATAGCTCGATCTTGGATAGAAGAAGCCCGTAGTTGTTATGTCGATCCGATAGACATGGATGACTACGAGTTTGTTAAGATGATGCTTGTGGATGGTTGTTTCATAGTAGAATTTTTTATACTTGTATACAGCCAATATACTACTTCAAATGATCATAAGTTCCCTCAAATTGATCCAAACGCTGGCCTTCTATTTTATCAAGGAATAATTCCTGACATGTATTTTGACTTGATAAAGCTCGAAAATCAACTTCCTTTCTTCATTCTCCAACGCTTGTTTGAGCTAATGCCAAAAGAAAACAACCCCAAATCTCTAATTCCGAGAGAATGA ATGGCCGAACGAATCTTTGATCGTTGTAGGTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATAGTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGAGATTTGAATCCGTGGGAATGAAAAATGGTGCGAATAATGATCAAGTTTCAAATGAAGTAGTGATTAGTGAGATTAAACCAAATCATTGGGGTGATACTGTGATATCAATCAAGAGCAAGCTGGAACAACTGCCTGTTGTTAATAAAGAATGCAAGATTTATAGAGTTCCCAAATTGCTATGTCAAATGAAAAAGACGACGTATGTCCCTCAAGTCATTTCTATCGGCCCTTTTCATCATGGTTCTAAAGATTTGAATGCTACAGAACCTTATAAGCTTCAAGGTCTTCGTAACTTTCTACGTCGTCTCGATAATCATAAGGAGAAATCATTGGAGGAGCTTGTGAAAATAGCTCGATCTTGGATAGAAGAAGCCCGTAGTTGTTATGTCGATCCGATAGACATGGATGACTACGAGTTTGTTAAGATGATGCTTGTGGATGGTTGTTTCATAGTAGAATTTTTTATACTTGTATACAGCCAATATACTACTTCAAATGATCATAAGTTCCCTCAAATTGATCCAAACGCTGGCCTTCTATTTTATCAAGGAATAATTCCTGACATGTATTTTGACTTGATAAAGCTCGAAAATCAACTTCCTTTCTTCATTCTCCAACGCTTGTTTGAGCTAATGCCAAAAGAAAACAACCCCAAATCTCTAATTCCGAGAGAATGA MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWRFESVGMKNGANNDQVSNEVVISEIKPNHWGDTVISIKSKLEQLPVVNKECKIYRVPKLLCQMKKTTYVPQVISIGPFHHGSKDLNATEPYKLQGLRNFLRRLDNHKEKSLEELVKIARSWIEEARSCYVDPIDMDDYEFVKMMLVDGCFIVEFFILVYSQYTTSNDHKFPQIDPNAGLLFYQGIIPDMYFDLIKLENQLPFFILQRLFELMPKENNPKSLIPRE* Homology
BLAST of CsaV3_7G007350 vs. NCBI nr
Match: KAE8645830.1 (hypothetical protein Csa_017091 [Cucumis sativus]) HSP 1 Score: 954.9 bits (2467), Expect = 2.6e-274 Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. NCBI nr
Match: XP_031744666.1 (UPF0481 protein At3g47200-like [Cucumis sativus]) HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-122 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. NCBI nr
Match: XP_016899969.1 (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo] >KAA0064944.1 UPF0481 protein [Cucumis melo var. makuwa]) HSP 1 Score: 376.7 bits (966), Expect = 2.9e-100 Identity = 184/213 (86.38%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK06863.1 putative zinc finger protein [Cucumis melo var. makuwa]) HSP 1 Score: 293.1 bits (749), Expect = 4.2e-75 Identity = 164/253 (64.82%), Postives = 195/253 (77.08%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. NCBI nr
Match: KAE8652200.1 (hypothetical protein Csa_022279 [Cucumis sativus]) HSP 1 Score: 287.3 bits (734), Expect = 2.3e-73 Identity = 156/225 (69.33%), Postives = 175/225 (77.78%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.8e-15 Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. ExPASy Swiss-Prot
Match: Q8GYT9 (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 3.7e-05 Identity = 27/71 (38.03%), Postives = 40/71 (56.34%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. ExPASy TrEMBL
Match: A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 7.2e-137 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. ExPASy TrEMBL
Match: A0A0A0K4A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068570 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122 Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. ExPASy TrEMBL
Match: A0A5A7VCD8 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002630 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100 Identity = 184/213 (86.38%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. ExPASy TrEMBL
Match: A0A1S4DVF8 (UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488291 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100 Identity = 184/213 (86.38%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. ExPASy TrEMBL
Match: A0A5D3C4K6 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001670 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 2.1e-75 Identity = 164/253 (64.82%), Postives = 195/253 (77.08%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). ) HSP 1 Score: 121.7 bits (304), Expect = 1.6e-27 Identity = 68/184 (36.96%), Postives = 110/184 (59.78%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 119.8 bits (299), Expect = 6.0e-27 Identity = 77/223 (34.53%), Postives = 118/223 (52.91%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. TAIR 10
Match: AT3G50170.2 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 119.8 bits (299), Expect = 6.0e-27 Identity = 77/223 (34.53%), Postives = 118/223 (52.91%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 113.6 bits (283), Expect = 4.3e-25 Identity = 73/224 (32.59%), Postives = 117/224 (52.23%), Query Frame = 0
BLAST of CsaV3_7G007350 vs. TAIR 10
Match: AT2G36430.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 109.8 bits (273), Expect = 6.2e-24 Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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