CsaV3_7G006610 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G006610
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr7: 4108345 .. 4112650 (-)
RNA-Seq ExpressionCsaV3_7G006610
SyntenyCsaV3_7G006610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACATCACCATTGTGGTTCATATCTTAGTCGAATCCTCATCACCTCAGTTCATTTCTATTCTACTTTTACAACTTCTCCTCCCACCATTCCCCTCATTTCCTTATTGAGACAATGCAAGACGTTGATCAATGCGAAGCTTGCTCACCAGCAAATTTTTGTCCATGGCTTCACCGAAATGTTCAGCTACGCCGTTGGTGCCTATATCGAGTGTGGTGCTTCTGCAGAAGCTGTATCACTCCTCCAACGTCTTATACCGTCACATTCCACCGTTTTCTGGTGGAATGCACTGATTCGACGCTCTGTGAAACTTGGTCTCCTTGATGATACATTGGGTTTTTATTGTCAGATGCAGAGGCTTGGGTGGTTGCCTGACCATTACACCTTTCCTTTTGTTCTCAAAGCCTGTGGTGAGATACCATCGTTACGGCATGGTGCTTCAGTTCATGCCATAGTTTGTGCAAATGGATTAGGGTCAAATGTATTTATTTGTAATTCAATTGTGGCTATGTACGGGCGATGTGGGGCATTGGATGATGCACACCAAATGTTCGATGAGGTGCTTGAAAGAAAGATTGAAGACATTGTGTCTTGGAATTCAATTCTTGCTGCTTATGTACAAGGTGGGCAGTCAAGAACTGCCCTTAGAATTGCTTTTCGAATGGGTAACCACTACAGTCTTAAACTTCGCCCGGATGCAATCACGCTTGTGAATATTCTTCCTGCTTGTGCGTCAGTATTTGCACTTCAACATGGTAAGCAGGTACATGGATTTTCAGTACGAAATGGATTGGTGGATGATGTATTTGTAGGCAATGCTCTCGTGAGTATGTATGCCAAATGCTCAAAGATGAATGAGGCGAACAAGGTCTTTGAGGGGATAAAGAAGAAGGATGTGGTTTCTTGGAATGCTATGGTCACCGGGTATTCTCAGATTGGTAGCTTTGATAGTGCCCTTTCCTTGTTTAAGATGATGCAAGAGGAAGATATCAAGTTAGATGTGATAACGTGGAGTGCTGTAATTGCTGGGTACGCTCAAAAGGGGCATGGTTTTGAAGCCCTTGATGTATTTAGACAAATGCAGCTTTATGGGTTGGAGCCCAATGTTGTTACTCTCGCGTCTCTTCTTTCAGGTTGTGCATCTGTGGGAGCATTGCTTTATGGGAAGCAAACACATGCGTATGTCATAAAAAATATTCTCAACTTGAATTGGAATGATAAAGAGGACGACTTGTTGGTTCTCAACGGTCTAATTGATATGTATGCTAAATGCAAAAGCTATAGAGTCGCTCGCAGCATTTTTGACTCGATAGAAGGAAAAGACAAGAATGTGGTGACTTGGACTGTGATGATTGGTGGATATGCTCAGCATGGGGAAGCCAATGATGCATTAAAACTGTTTGCTCAGATATTTAAACAGAAGACCTCTTTAAAGCCTAACGCCTTTACTCTATCATGTGCCTTGATGGCTTGTGCACGTTTGGGCGAGTTAAGGCTTGGAAGACAACTCCATGCCTATGCTTTGCGGAATGAAAATGAGTCTGAGGTTTTATATGTAGGCAATTGCCTCATTGACATGTATTCCAAATCGGGGGACATTGATGCTGCTCGAGCTGTGTTTGACAACATGAAATTACGAAATGTTGTTTCTTGGACTTCTTTGATGACGGGCTATGGTATGCATGGTCGTGGTGAAGAAGCTTTGCATCTTTTTGATCAAATGCAGAAACTGGGTTTTGCTGTTGATGGGATTACCTTTCTTGTCGTTTTATATGCTTGTAGTCACTCTGGAATGGTGGATCAAGGCATGATCTACTTCCACGATATGGTCAAGGGCTTTGGGATTACCCCTGGAGCCGAACATTATGCATGTATGGTCGATCTCTTGGGTCGTGCAGGTCGTCTTAACGAAGCAATGGAACTCATCAAAAACATGTCAATGGAGCCGACTGCAGTTGTATGGGTGGCATTATTAAGTGCCAGTAGAATCCATGCAAATATTGAGCTTGGGGAATATGCAGCAAGTAAATTGACAGAGTTAGGGGCAGAGAACGATGGTTCATACACATTACTTTCAAACTTGTATGCAAATGCACGACGTTGGAAAGACGTAGCAAGAATTAGGTCATTGATGAAGCATACCGGGATCAGAAAGAGGCCGGGATGTAGTTGGATACAAGGGAAGAAAAGCACTACAACTTTCTTTGTAGGTGATAGAAGTCATCCAGAATCAGAGCAAATATACAATCTTCTTTTGGATTTGATTAAACGAATAAAAGACATGGGGTACGTTCCTCAAACGAGCTTTGCTCTTCATGATGTTGATGATGAAGAGAAAGGTGATCTCCTGTTTGAGCATAGTGAAAAGTTGGCTGTTGCTTATGGGATTTTAACAACAGCCCCAGGACAGCCAATTCGGATACACAAGAATTTGCGCATCTGCGGTGATTGCCACAGTGCCTTAACCTACATTTCCATGATTATTGACCACGAGATCGTATTGAGAGACTCGAGTAGGTTCCATCATTTCAAGAAAGGCTCATGTTCTTGTAGAAGCTATTGGTGATGGAAAAATTCAGACGAAACTTTGAGGTTAGAATTTTATTTGATTTGTATTAGTTCATACCAGCACAATTCACATGTAGCATGACTTAAATGTAATCAAACATCAAAGTTTCTTCTCAAGTTCAATTCCCTACTACAAAATTGACATTACGTGATGCATGCAACTTTTAATTATTTAAATGTCAAGTAACATGTATCTTTTCCAGAAAAGGTCAAGAATAATAATAAAAAAGCGGAGTTTCACGGAATCTTTCATATATTTTCAAGCTTGCCTAAACTTGACATTTTAAAAAAGTCAAGTAATATCAAGTACACAAACTATATAATATTCTCTATTTTATTTTCCATTATCTCTCATTTTTGTTGAAAAACCCTACCTCCTTTGCGTGAAAGTAGCCACAACACACCCATCCCCCATCATCTTCTTCGATTTTCTCTTTCTCACATTAACTCTTTTTTTTGACCAACTCCTCTCAACGTTGAAAGCAGCCACAACTGCACGATTGTTGCTCTCTCATTCTCTCAACTCTCTCTAGCACTTCCTGCTTGAGTCATTGCTCCTAGGTCTGCGAGTCCACTTGGGGTTTTGAAAGATTTGATGTTCTCAGTCATCTGATGCGAATAGGTGACATGTAGGTTGGGTATTTATGTCTCCACTTAAGGTTTTCATTTTTCCTCTTTTGTTTTACTTTAATTCTAGAGAGAAAAGGGTAGTGTTGTGGGTCTCCTGATCGAGTGAAATTTGTTTTTGACATTGTATTATTTGTAGGTTTTTATAAATTCTACTCATGGGATGCGATAGGCTGTAGCTGTTTAATTTCACAGATGGGAAGCAGGGCAAAGTTTGGAAAGAAATTAATTCATCTATTGAATGTTTCTGTATTCAGTGACAGTTTAATTGTTGTAAATGTAATTCAATTGTGTTATTTTGTGATTTCTTCTCAAATTTGAATGACTAAATTAAATTTATCACCTCTTGCTTTTTTTTTTGATTTATTGATTATGGGTATTTATTTTGGTTTTAGGATCGGAGAGCGAGTAGTTCATTCACGAAGAGGGGTTCAATGATTTACATAAACATTAATTTATAAGAGCAGTTCGGTTATATAGGGATTTGATTCAAGACCTCTTTGAAAGTGAAAATAAAGAGGTTCGTAGCTTTAAAGCCAGATGTGACTTATGCTTCATTTTTTAGTACTATGTAATATGGATAAAGAAAATAACAATTTGTTTCAGAGTGTCCTCACAAACTGGACCAGAATGTGCTGCCCTTCCACCGTGGAACTCCTATGACCCATTTTCTTGGATTAGTTCTAAAGAGTTCCTAACAAATTCAGAGATGATTGCCAATCAGCTTAAATCTAAGGATATGAGGTAGGAAATTCTAACTGGCAGCCAAATTGTTTTTGTAACATTGGTCATTTTTATGATCTAATGGGTGGATTTTCAGCTTTATTGTAATGTAATGAAGGTAGTTGGTGTTTCTTGAGAAATTATTCAGTTAGGCCGCCATGATGTAGTTGGTAATTTTTCACTATTGAAAAGATTTTTGAATTTATATTTTGTAGTTATTAAGTGGCATACAAAGTTTTTGAACTTTCATTGTGCAGGACTCCCATGCACGAGTAGCAATAAATGCACTCATCGTCAGTCGTCTCCTTCTGCTCGTAGAACTCAAGGGTTGGCAACTGCATCTTTCCTTTGGCACCAACAACCCGAGGAGTGATGAGACTGGCTAG

mRNA sequence

ATGATACATCACCATTGTGGTTCATATCTTAGTCGAATCCTCATCACCTCAGTTCATTTCTATTCTACTTTTACAACTTCTCCTCCCACCATTCCCCTCATTTCCTTATTGAGACAATGCAAGACGTTGATCAATGCGAAGCTTGCTCACCAGCAAATTTTTGTCCATGGCTTCACCGAAATGTTCAGCTACGCCGTTGGTGCCTATATCGAGTGTGGTGCTTCTGCAGAAGCTGTATCACTCCTCCAACGTCTTATACCGTCACATTCCACCGTTTTCTGGTGGAATGCACTGATTCGACGCTCTGTGAAACTTGGTCTCCTTGATGATACATTGGGTTTTTATTGTCAGATGCAGAGGCTTGGGTGGTTGCCTGACCATTACACCTTTCCTTTTGTTCTCAAAGCCTGTGGTGAGATACCATCGTTACGGCATGGTGCTTCAGTTCATGCCATAGTTTGTGCAAATGGATTAGGGTCAAATGTATTTATTTGTAATTCAATTGTGGCTATGTACGGGCGATGTGGGGCATTGGATGATGCACACCAAATGTTCGATGAGGTGCTTGAAAGAAAGATTGAAGACATTGTGTCTTGGAATTCAATTCTTGCTGCTTATGTACAAGGTGGGCAGTCAAGAACTGCCCTTAGAATTGCTTTTCGAATGGGTAACCACTACAGTCTTAAACTTCGCCCGGATGCAATCACGCTTGTGAATATTCTTCCTGCTTGTGCTGCCCTTTCCTTGTTTAAGATGATGCAAGAGGAAGATATCAAGTTAGATGTGATAACGTGGAGTGCTGTAATTGCTGGGTACGCTCAAAAGGGGCATGGTTTTGAAGCCCTTGATGTATTTAGACAAATGCAGCTTTATGGGTTGGAGCCCAATGTTGTTACTCTCGCGTCTCTTCTTTCAGGTTGTGCATCTGTGGGAGCATTGCTTTATGGGAAGCAAACACATGCGTATGTCATAAAAAATATTCTCAACTTGAATTGGAATGATAAAGAGGACGACTTGTTGGTTCTCAACGGTCTAATTGATATAGTGTCCTCACAAACTGGACCAGAATGTGCTGCCCTTCCACCGTGGAACTCCTATGACCCATTTTCTTGGATTAGTTCTAAAGAGTTCCTAACAAATTCAGAGATGATTGCCAATCAGCTTAAATCTAAGGATATGAGCTTTATTGACTCCCATGCACGAGTAGCAATAAATGCACTCATCGTCAGTCGTCTCCTTCTGCTCGTAGAACTCAAGGGTTGGCAACTGCATCTTTCCTTTGGCACCAACAACCCGAGGAGTGATGAGACTGGCTAG

Coding sequence (CDS)

ATGATACATCACCATTGTGGTTCATATCTTAGTCGAATCCTCATCACCTCAGTTCATTTCTATTCTACTTTTACAACTTCTCCTCCCACCATTCCCCTCATTTCCTTATTGAGACAATGCAAGACGTTGATCAATGCGAAGCTTGCTCACCAGCAAATTTTTGTCCATGGCTTCACCGAAATGTTCAGCTACGCCGTTGGTGCCTATATCGAGTGTGGTGCTTCTGCAGAAGCTGTATCACTCCTCCAACGTCTTATACCGTCACATTCCACCGTTTTCTGGTGGAATGCACTGATTCGACGCTCTGTGAAACTTGGTCTCCTTGATGATACATTGGGTTTTTATTGTCAGATGCAGAGGCTTGGGTGGTTGCCTGACCATTACACCTTTCCTTTTGTTCTCAAAGCCTGTGGTGAGATACCATCGTTACGGCATGGTGCTTCAGTTCATGCCATAGTTTGTGCAAATGGATTAGGGTCAAATGTATTTATTTGTAATTCAATTGTGGCTATGTACGGGCGATGTGGGGCATTGGATGATGCACACCAAATGTTCGATGAGGTGCTTGAAAGAAAGATTGAAGACATTGTGTCTTGGAATTCAATTCTTGCTGCTTATGTACAAGGTGGGCAGTCAAGAACTGCCCTTAGAATTGCTTTTCGAATGGGTAACCACTACAGTCTTAAACTTCGCCCGGATGCAATCACGCTTGTGAATATTCTTCCTGCTTGTGCTGCCCTTTCCTTGTTTAAGATGATGCAAGAGGAAGATATCAAGTTAGATGTGATAACGTGGAGTGCTGTAATTGCTGGGTACGCTCAAAAGGGGCATGGTTTTGAAGCCCTTGATGTATTTAGACAAATGCAGCTTTATGGGTTGGAGCCCAATGTTGTTACTCTCGCGTCTCTTCTTTCAGGTTGTGCATCTGTGGGAGCATTGCTTTATGGGAAGCAAACACATGCGTATGTCATAAAAAATATTCTCAACTTGAATTGGAATGATAAAGAGGACGACTTGTTGGTTCTCAACGGTCTAATTGATATAGTGTCCTCACAAACTGGACCAGAATGTGCTGCCCTTCCACCGTGGAACTCCTATGACCCATTTTCTTGGATTAGTTCTAAAGAGTTCCTAACAAATTCAGAGATGATTGCCAATCAGCTTAAATCTAAGGATATGAGCTTTATTGACTCCCATGCACGAGTAGCAATAAATGCACTCATCGTCAGTCGTCTCCTTCTGCTCGTAGAACTCAAGGGTTGGCAACTGCATCTTTCCTTTGGCACCAACAACCCGAGGAGTGATGAGACTGGCTAG

Protein sequence

MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACAALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEMIANQLKSKDMSFIDSHARVAINALIVSRLLLLVELKGWQLHLSFGTNNPRSDETG*
Homology
BLAST of CsaV3_7G006610 vs. NCBI nr
Match: KGN43784.2 (hypothetical protein Csa_017356 [Cucumis sativus])

HSP 1 Score: 889.0 bits (2296), Expect = 1.6e-254
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE
Sbjct: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR
Sbjct: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI
Sbjct: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240

Query: 241 LPACAALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 300
           LPACAALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL
Sbjct: 241 LPACAALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 300

Query: 301 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECAAL 360
           ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECAAL
Sbjct: 301 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECAAL 360

Query: 361 PPWNSYDPFSWISSKEFLTNSEMIANQLKSKDMSFIDSHARVAINALIVSRLLLLVELKG 420
           PPWNSYDPFSWISSKEFLTNSEMIANQLKSKDMSFIDSHARVAINALIVSRLLLLVELKG
Sbjct: 361 PPWNSYDPFSWISSKEFLTNSEMIANQLKSKDMSFIDSHARVAINALIVSRLLLLVELKG 420

Query: 421 WQLHLSFGTNNPRSDETG 439
           WQLHLSFGTNNPRSDETG
Sbjct: 421 WQLHLSFGTNNPRSDETG 438

BLAST of CsaV3_7G006610 vs. NCBI nr
Match: XP_004137054.2 (pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658790.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658791.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658792.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658793.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658794.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658795.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658796.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658797.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658798.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658799.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_011658800.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744346.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744347.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744348.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744349.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744350.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744351.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744352.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_031744353.1 pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus])

HSP 1 Score: 673.7 bits (1737), Expect = 1.1e-189
Identity = 347/421 (82.42%), Postives = 348/421 (82.66%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE
Sbjct: 14  MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 73

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR
Sbjct: 74  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 133

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD
Sbjct: 134 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 193

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI
Sbjct: 194 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 253

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 254 LPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDV 313

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ
Sbjct: 314 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 373

BLAST of CsaV3_7G006610 vs. NCBI nr
Match: KAA0031472.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06925.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 639.4 bits (1648), Expect = 2.2e-179
Identity = 329/421 (78.15%), Postives = 338/421 (80.29%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIH  CGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE
Sbjct: 1   MIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           MFSYAVGAYIECGASAEAVSLLQR+IPSHSTVFWWNALIRRSV+LGLLDDTLGFYCQMQ 
Sbjct: 61  MFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQMQS 120

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPS RHGASVHA+VCA G  SNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGALDD 180

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           A QMFDEVLER+IEDIVSWNSILAAYVQGG+SRTALRIAF+MGNHYSLKLRPDAITLVNI
Sbjct: 181 ARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLVNI 240

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 241 LPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKKDV 300

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 360

BLAST of CsaV3_7G006610 vs. NCBI nr
Match: KAA0031472.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06925.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 5.6e-13
Identity = 56/107 (52.34%), Postives = 66/107 (61.68%), Query Frame = 0

Query: 338 DLLVLNGLIDI------VSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEMIANQLKSK 397
           D+++LN L+ +      VSSQTG E AALPPW S+D FSWI SKEFLTN+EMIANQLKSK
Sbjct: 875 DVMLLNHLMRLGDMKVGVSSQTGLERAALPPWYSHDSFSWIISKEFLTNAEMIANQLKSK 934

Query: 398 DMSFIDSHARVAINALIVSRLLLLVELKGWQLHLSFGTNNPRSDETG 439
                          L   +L L  +       LSFGTNNP+SDETG
Sbjct: 935 GYEV----------ELKGWQLHLSFDT------LSFGTNNPQSDETG 965


HSP 2 Score: 639.4 bits (1648), Expect = 2.2e-179
Identity = 329/421 (78.15%), Postives = 338/421 (80.29%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIH  CGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE
Sbjct: 14  MIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 73

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           MFSYAVGAYIECGASAEAVSLLQR+IPSHSTVFWWNALIRRSV+LGLLDDTLGFYCQMQ 
Sbjct: 74  MFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQMQS 133

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPS RHGASVHA+VCA G  SNVFICNSIVAMYGRCGALDD
Sbjct: 134 LGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGALDD 193

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           A QMFDEVLER+IEDIVSWNSILAAYVQGG+SRTALRIAF+MGNHYSLKLRPDAITLVNI
Sbjct: 194 ARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLVNI 253

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 254 LPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKKDV 313

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ
Sbjct: 314 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 373

BLAST of CsaV3_7G006610 vs. NCBI nr
Match: XP_038889862.1 (pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889863.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889864.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889865.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889866.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889867.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889868.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889869.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889870.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889871.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889872.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889873.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889874.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_038889875.1 pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida])

HSP 1 Score: 585.9 bits (1509), Expect = 2.9e-163
Identity = 301/421 (71.50%), Postives = 322/421 (76.48%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIHH+CGSYL+R+L TSV FYST T SPPTIP IS+L+QCKTLINAKLAHQQIFV+GFTE
Sbjct: 1   MIHHYCGSYLNRVLSTSVQFYSTSTISPPTIPFISILKQCKTLINAKLAHQQIFVNGFTE 60

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           + SYAVGAYIECGA  EAV+LLQRLIPSHSTVFWWNALIRRSV+LG LDDTLGFYCQMQR
Sbjct: 61  IISYAVGAYIECGAFVEAVTLLQRLIPSHSTVFWWNALIRRSVRLGFLDDTLGFYCQMQR 120

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPS R GASVHAIVCANG  SNVFICNS+VAMYGRCGAL D
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSFRCGASVHAIVCANGFESNVFICNSLVAMYGRCGALGD 180

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           A Q+FDEVLERKIEDIVSWNSILAAYVQG +S+TALRIAFRM NHYS KLRPDAITLVNI
Sbjct: 181 ARQVFDEVLERKIEDIVSWNSILAAYVQGRESKTALRIAFRMANHYSFKLRPDAITLVNI 240

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 241 LPACASAFAPQHGKQVHGFSIRSGLVDDVFVGNALVDMYAKCSKMNEANKVFERMKEKDV 300

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFK MQEEDI LDV+TWSAVIAGY+Q+GHGFEAL+VFRQ
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKRMQEEDIALDVVTWSAVIAGYSQRGHGFEALNVFRQ 360

BLAST of CsaV3_7G006610 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.2e-72
Identity = 177/482 (36.72%), Postives = 244/482 (50.62%), Query Frame = 0

Query: 22  STFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGF--TEMFSYAVGAYIECGASAEAV 81
           S F+TS P I     + +CKT+   KL HQ++   G     + S+ +  YI  G  + AV
Sbjct: 21  SLFSTSAPEI-TPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAV 80

Query: 82  SLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGE 141
           SLL+R  PS + V+ WN+LIR     G  +  L  +  M  L W PD+YTFPFV KACGE
Sbjct: 81  SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 140

Query: 142 IPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSW 201
           I S+R G S HA+    G  SNVF+ N++VAMY RC +L DA ++FDE+    + D+VSW
Sbjct: 141 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSW 200

Query: 202 NSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACAALS----------- 261
           NSI+ +Y + G+ + AL +  RM N +    RPD ITLVN+LP CA+L            
Sbjct: 201 NSIIESYAKLGKPKVALEMFSRMTNEFG--CRPDNITLVNVLPPCASLGTHSLGKQLHCF 260

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 261 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 320

Query: 322 --LFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSG 381
             LF+ MQEE IK+DV+TWSA I+GYAQ+G G+EAL V RQM   G++PN VTL S+LSG
Sbjct: 321 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 380

Query: 382 CASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECA-----ALP 413
           CASVGAL++GK+ H Y IK  ++L  N   D+ +V+N LID+ +     + A     +L 
Sbjct: 381 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 440

BLAST of CsaV3_7G006610 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.2e-35
Identity = 109/436 (25.00%), Postives = 206/436 (47.25%), Query Frame = 0

Query: 10  LSRILITSVHFYSTFTTSPPTI--------PLISLLRQCKTLINAKLAHQQIFVHGF--- 69
           L  +L  S    +T TT+ P++           S L+ CKT+   K+ H+ +   G    
Sbjct: 4   LGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDND 63

Query: 70  TEMFSYAVGAYIECGASAEAVSLLQRLI---PSHSTVFWWNALIRRSVKLGLLDDTLGFY 129
               +  V    E G + E++S  + +     S+ T F +N+LIR     GL ++ +  +
Sbjct: 64  VSTITKLVARSCELG-TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 123

Query: 130 CQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRC 189
            +M   G  PD YTFPF L AC +  +  +G  +H ++   G   ++F+ NS+V  Y  C
Sbjct: 124 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 183

Query: 190 GALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAI 249
           G LD A ++FDE+ ER   ++VSW S++  Y +   ++ A+ + FRM      ++ P+++
Sbjct: 184 GELDSARKVFDEMSER---NVVSWTSMICGYARRDFAKDAVDLFFRMVR--DEEVTPNSV 243

Query: 250 TLVNILPACAAL-------SLFKMMQEEDIKLDVITWSAVI------------------- 309
           T+V ++ ACA L        ++  ++   I+++ +  SA++                   
Sbjct: 244 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 303

Query: 310 ------------AGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGK 369
                       + Y ++G   EAL VF  M   G+ P+ +++ S +S C+ +  +L+GK
Sbjct: 304 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 363

Query: 370 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECAALPPWNSYDPFSWISSKEF 394
             H YV++N    +W++      + N LID+       + A       +  F  +S+K  
Sbjct: 364 SCHGYVLRNGFE-SWDN------ICNALIDMYMKCHRQDTA-------FRIFDRMSNKTV 419

BLAST of CsaV3_7G006610 vs. ExPASy Swiss-Prot
Match: P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.6e-34
Identity = 92/295 (31.19%), Postives = 153/295 (51.86%), Query Frame = 0

Query: 96  NALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCA 155
           N +IR  V  G   + +  +  M      PDHYTFP VLKAC    ++  G  +H     
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168

Query: 156 NGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTA 215
            GL S +F+ N +V+MYG+CG L +A  + DE+  R   D+VSWNS++  Y Q  +   A
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR---DVVSWNSLVVGYAQNQRFDDA 228

Query: 216 LRIAFRMGNHYSLKLRPDAITLVNILPACAALSLFKMMQEEDI-----KLDVITWSAVIA 275
           L +   M    S+K+  DA T+ ++LPA +  +   +M  +D+     K  +++W+ +I 
Sbjct: 229 LEVCREM---ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 288

Query: 276 GYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNL 335
            Y +     EA++++ +M+  G EP+ V++ S+L  C    AL  GK+ H Y+ +  L  
Sbjct: 289 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 348

Query: 336 NWNDKEDDLLVLNGLIDIVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEMIA 386
           N       LL+ N LID+ +     +C  L    + D F  + S++ ++ + MI+
Sbjct: 349 N-------LLLENALIDMYA-----KCGCLE--KARDVFENMKSRDVVSWTAMIS 383

BLAST of CsaV3_7G006610 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.3e-33
Identity = 99/366 (27.05%), Postives = 169/366 (46.17%), Query Frame = 0

Query: 35  SLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRLIPS--HSTV 94
           SL+         K  H ++ V G  +   + +   I   +S   ++  +++        +
Sbjct: 26  SLIDSATHKAQLKQIHARLLVLGL-QFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 85

Query: 95  FWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAI 154
           F WNA+IR   +     D L  Y  MQ     PD +TFP +LKAC  +  L+ G  VHA 
Sbjct: 86  FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 145

Query: 155 VCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQS 214
           V   G  ++VF+ N ++A+Y +C  L  A  +F E L      IVSW +I++AY Q G+ 
Sbjct: 146 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQNGEP 205

Query: 215 RTALRIAFRMGNHYSLKLRPDAITLVNILPA----------------------------- 274
             AL I  +M     + ++PD + LV++L A                             
Sbjct: 206 MEALEIFSQM---RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 265

Query: 275 ---------CAALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLE 334
                    C  ++  K++ ++    ++I W+A+I+GYA+ G+  EA+D+F +M    + 
Sbjct: 266 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 325

Query: 335 PNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTG 361
           P+ +++ S +S CA VG+L   +  + YV +       +D  DD+ + + LID+ +    
Sbjct: 326 PDTISITSAISACAQVGSLEQARSMYEYVGR-------SDYRDDVFISSALIDMFAKCGS 379

BLAST of CsaV3_7G006610 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.1e-33
Identity = 108/432 (25.00%), Postives = 192/432 (44.44%), Query Frame = 0

Query: 22  STFTTSPPTIPLI-SLLRQCKTLINAKLAHQQIFVHGFT-EMF--SYAVGAYIECGASAE 81
           S+FT S P   L+ S ++   + I  +  H  +   GF+ E+F  +  + AY +CG+  +
Sbjct: 14  SSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLED 73

Query: 82  AVSLLQRLIPSHSTVFWWNALIRRSVKLGLLD---------------------------- 141
              +  ++      ++ WN+++    KLG LD                            
Sbjct: 74  GRQVFDKM--PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHD 133

Query: 142 ---DTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICN 201
              + L ++  M + G++ + Y+F  VL AC  +  +  G  VH+++  +   S+V+I +
Sbjct: 134 RCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 193

Query: 202 SIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHY 261
           ++V MY +CG ++DA ++FDE+ +R   ++VSWNS++  + Q G +  AL + F+M    
Sbjct: 194 ALVDMYSKCGNVNDAQRVFDEMGDR---NVVSWNSLITCFEQNGPAVEALDV-FQM--ML 253

Query: 262 SLKLRPDAITLVNILPACAALSLFKMMQE------------EDIKL-------------- 321
             ++ PD +TL +++ ACA+LS  K+ QE             DI L              
Sbjct: 254 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 313

Query: 322 --------------------------------------------DVITWSAVIAGYAQKG 349
                                                       +V++W+A+IAGY Q G
Sbjct: 314 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 373

BLAST of CsaV3_7G006610 vs. ExPASy TrEMBL
Match: A0A0A0K225 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G063940 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 5.2e-190
Identity = 347/421 (82.42%), Postives = 348/421 (82.66%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE
Sbjct: 14  MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 73

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR
Sbjct: 74  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 133

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD
Sbjct: 134 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 193

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI
Sbjct: 194 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 253

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 254 LPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDV 313

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ
Sbjct: 314 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 373

BLAST of CsaV3_7G006610 vs. ExPASy TrEMBL
Match: A0A1S3C0G3 (pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN=LOC103495413 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.1e-179
Identity = 329/421 (78.15%), Postives = 338/421 (80.29%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIH  CGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE
Sbjct: 14  MIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 73

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           MFSYAVGAYIECGASAEAVSLLQR+IPSHSTVFWWNALIRRSV+LGLLDDTLGFYCQMQ 
Sbjct: 74  MFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQMQS 133

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPS RHGASVHA+VCA G  SNVFICNSIVAMYGRCGALDD
Sbjct: 134 LGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGALDD 193

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           A QMFDEVLER+IEDIVSWNSILAAYVQGG+SRTALRIAF+MGNHYSLKLRPDAITLVNI
Sbjct: 194 ARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLVNI 253

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 254 LPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKKDV 313

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ
Sbjct: 314 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 373

BLAST of CsaV3_7G006610 vs. ExPASy TrEMBL
Match: A0A5A7SK77 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002350 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.1e-179
Identity = 329/421 (78.15%), Postives = 338/421 (80.29%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIH  CGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE
Sbjct: 1   MIHPRCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           MFSYAVGAYIECGASAEAVSLLQR+IPSHSTVFWWNALIRRSV+LGLLDDTLGFYCQMQ 
Sbjct: 61  MFSYAVGAYIECGASAEAVSLLQRIIPSHSTVFWWNALIRRSVRLGLLDDTLGFYCQMQS 120

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGWLPDHYTFPFVLKACGEIPS RHGASVHA+VCA G  SNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAMYGRCGALDD 180

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           A QMFDEVLER+IEDIVSWNSILAAYVQGG+SRTALRIAF+MGNHYSLKLRPDAITLVNI
Sbjct: 181 ARQMFDEVLERRIEDIVSWNSILAAYVQGGKSRTALRIAFQMGNHYSLKLRPDAITLVNI 240

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 241 LPACASIFAIQHGKQVHGFSVRSGLVDDVFVGNALVSMYAKCSKMNEANKVFERIKKKDV 300

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 360

BLAST of CsaV3_7G006610 vs. ExPASy TrEMBL
Match: A0A5A7SK77 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002350 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-13
Identity = 56/107 (52.34%), Postives = 66/107 (61.68%), Query Frame = 0

Query: 338 DLLVLNGLIDI------VSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEMIANQLKSK 397
           D+++LN L+ +      VSSQTG E AALPPW S+D FSWI SKEFLTN+EMIANQLKSK
Sbjct: 875 DVMLLNHLMRLGDMKVGVSSQTGLERAALPPWYSHDSFSWIISKEFLTNAEMIANQLKSK 934

Query: 398 DMSFIDSHARVAINALIVSRLLLLVELKGWQLHLSFGTNNPRSDETG 439
                          L   +L L  +       LSFGTNNP+SDETG
Sbjct: 935 GYEV----------ELKGWQLHLSFDT------LSFGTNNPQSDETG 965


HSP 2 Score: 557.8 bits (1436), Expect = 4.2e-155
Identity = 291/421 (69.12%), Postives = 316/421 (75.06%), Query Frame = 0

Query: 1   MIHHHCGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTE 60
           MIHH C SY+SRIL +SV  YST  TS   IPLISLL+QC+TLINAKLAHQQI V+GFT+
Sbjct: 1   MIHHSCASYVSRILPSSVPCYSTSATS---IPLISLLQQCRTLINAKLAHQQILVNGFTQ 60

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           M +YA+GAYIECGASA+AVSLLQRLIPSHSTVFWWNALIRRSV+LG LDD LGFYCQMQR
Sbjct: 61  MVTYAIGAYIECGASAQAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDVLGFYCQMQR 120

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGW PDHYTFPFVLKACGEIPS R GASVHA+VCANG  SNVFICNSIVAMYGRCGALDD
Sbjct: 121 LGWSPDHYTFPFVLKACGEIPSFRRGASVHAVVCANGFESNVFICNSIVAMYGRCGALDD 180

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           A Q+FDEVLERKIEDIVSWNSILAAYVQGG+S+TALRIA RM NHY+ KL PDAITLVNI
Sbjct: 181 ARQVFDEVLERKIEDIVSWNSILAAYVQGGESKTALRIAVRMANHYNCKLLPDAITLVNI 240

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 241 LPACASTLAPQHGKQVHGYAVRSGLVDDVFVGNALVDMYAKCWKMDEASRVFELMKEKDV 300

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFK MQEEDI+L+V+TWSA+IAGY+Q+G GFEALDVFRQ
Sbjct: 301 VSWNAMVTGYSQISRFDDALSLFKRMQEEDIELNVVTWSALIAGYSQRGLGFEALDVFRQ 360

BLAST of CsaV3_7G006610 vs. ExPASy TrEMBL
Match: A0A6J1CP62 (pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013040 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.7e-132
Identity = 248/361 (68.70%), Postives = 267/361 (73.96%), Query Frame = 0

Query: 61  MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
           M +YA+GAYIECGASA+AVSLLQRLIPSHSTVFWWNALIRRSV+LG LDD LGFYCQMQR
Sbjct: 1   MVTYAIGAYIECGASAQAVSLLQRLIPSHSTVFWWNALIRRSVRLGFLDDVLGFYCQMQR 60

Query: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
           LGW PDHYTFPFVLKACGEIPS R GASVHA+VCANG  SNVFICNSIVAMYGRCGALDD
Sbjct: 61  LGWSPDHYTFPFVLKACGEIPSFRRGASVHAVVCANGFESNVFICNSIVAMYGRCGALDD 120

Query: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
           A Q+FDEVLERKIEDIVSWNSILAAYVQGG+S+TALRIA RM NHY+ KL PDAITLVNI
Sbjct: 121 ARQVFDEVLERKIEDIVSWNSILAAYVQGGESKTALRIAVRMANHYNCKLLPDAITLVNI 180

Query: 241 LPACA------------------------------------------------------- 300
           LPACA                                                       
Sbjct: 181 LPACASTLAPQHGKQVHGYAVRSGLVDDVFVGNALVDMYAKCWKMDEASRVFELMKEKDV 240

Query: 301 ------------------ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 349
                             ALSLFK MQEEDI+L+V+TWSA+IAGY+Q+G GFEALDVFRQ
Sbjct: 241 VSWNAMVTGYSQISRFDDALSLFKRMQEEDIELNVVTWSALIAGYSQRGLGFEALDVFRQ 300

BLAST of CsaV3_7G006610 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-73
Identity = 177/482 (36.72%), Postives = 244/482 (50.62%), Query Frame = 0

Query: 22  STFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGF--TEMFSYAVGAYIECGASAEAV 81
           S F+TS P I     + +CKT+   KL HQ++   G     + S+ +  YI  G  + AV
Sbjct: 21  SLFSTSAPEI-TPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAV 80

Query: 82  SLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGE 141
           SLL+R  PS + V+ WN+LIR     G  +  L  +  M  L W PD+YTFPFV KACGE
Sbjct: 81  SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 140

Query: 142 IPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSW 201
           I S+R G S HA+    G  SNVF+ N++VAMY RC +L DA ++FDE+    + D+VSW
Sbjct: 141 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSW 200

Query: 202 NSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACAALS----------- 261
           NSI+ +Y + G+ + AL +  RM N +    RPD ITLVN+LP CA+L            
Sbjct: 201 NSIIESYAKLGKPKVALEMFSRMTNEFG--CRPDNITLVNVLPPCASLGTHSLGKQLHCF 260

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 261 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 320

Query: 322 --LFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSG 381
             LF+ MQEE IK+DV+TWSA I+GYAQ+G G+EAL V RQM   G++PN VTL S+LSG
Sbjct: 321 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 380

Query: 382 CASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECA-----ALP 413
           CASVGAL++GK+ H Y IK  ++L  N   D+ +V+N LID+ +     + A     +L 
Sbjct: 381 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 440

BLAST of CsaV3_7G006610 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 149.4 bits (376), Expect = 6.6e-36
Identity = 109/436 (25.00%), Postives = 206/436 (47.25%), Query Frame = 0

Query: 10  LSRILITSVHFYSTFTTSPPTI--------PLISLLRQCKTLINAKLAHQQIFVHGF--- 69
           L  +L  S    +T TT+ P++           S L+ CKT+   K+ H+ +   G    
Sbjct: 4   LGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDND 63

Query: 70  TEMFSYAVGAYIECGASAEAVSLLQRLI---PSHSTVFWWNALIRRSVKLGLLDDTLGFY 129
               +  V    E G + E++S  + +     S+ T F +N+LIR     GL ++ +  +
Sbjct: 64  VSTITKLVARSCELG-TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 123

Query: 130 CQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRC 189
            +M   G  PD YTFPF L AC +  +  +G  +H ++   G   ++F+ NS+V  Y  C
Sbjct: 124 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 183

Query: 190 GALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAI 249
           G LD A ++FDE+ ER   ++VSW S++  Y +   ++ A+ + FRM      ++ P+++
Sbjct: 184 GELDSARKVFDEMSER---NVVSWTSMICGYARRDFAKDAVDLFFRMVR--DEEVTPNSV 243

Query: 250 TLVNILPACAAL-------SLFKMMQEEDIKLDVITWSAVI------------------- 309
           T+V ++ ACA L        ++  ++   I+++ +  SA++                   
Sbjct: 244 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 303

Query: 310 ------------AGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGK 369
                       + Y ++G   EAL VF  M   G+ P+ +++ S +S C+ +  +L+GK
Sbjct: 304 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 363

Query: 370 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECAALPPWNSYDPFSWISSKEF 394
             H YV++N    +W++      + N LID+       + A       +  F  +S+K  
Sbjct: 364 SCHGYVLRNGFE-SWDN------ICNALIDMYMKCHRQDTA-------FRIFDRMSNKTV 419

BLAST of CsaV3_7G006610 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 149.4 bits (376), Expect = 6.6e-36
Identity = 109/436 (25.00%), Postives = 206/436 (47.25%), Query Frame = 0

Query: 10  LSRILITSVHFYSTFTTSPPTI--------PLISLLRQCKTLINAKLAHQQIFVHGF--- 69
           L  +L  S    +T TT+ P++           S L+ CKT+   K+ H+ +   G    
Sbjct: 4   LGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDND 63

Query: 70  TEMFSYAVGAYIECGASAEAVSLLQRLI---PSHSTVFWWNALIRRSVKLGLLDDTLGFY 129
               +  V    E G + E++S  + +     S+ T F +N+LIR     GL ++ +  +
Sbjct: 64  VSTITKLVARSCELG-TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 123

Query: 130 CQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRC 189
            +M   G  PD YTFPF L AC +  +  +G  +H ++   G   ++F+ NS+V  Y  C
Sbjct: 124 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 183

Query: 190 GALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAI 249
           G LD A ++FDE+ ER   ++VSW S++  Y +   ++ A+ + FRM      ++ P+++
Sbjct: 184 GELDSARKVFDEMSER---NVVSWTSMICGYARRDFAKDAVDLFFRMVR--DEEVTPNSV 243

Query: 250 TLVNILPACAAL-------SLFKMMQEEDIKLDVITWSAVI------------------- 309
           T+V ++ ACA L        ++  ++   I+++ +  SA++                   
Sbjct: 244 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 303

Query: 310 ------------AGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGK 369
                       + Y ++G   EAL VF  M   G+ P+ +++ S +S C+ +  +L+GK
Sbjct: 304 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 363

Query: 370 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTGPECAALPPWNSYDPFSWISSKEF 394
             H YV++N    +W++      + N LID+       + A       +  F  +S+K  
Sbjct: 364 SCHGYVLRNGFE-SWDN------ICNALIDMYMKCHRQDTA-------FRIFDRMSNKTV 419

BLAST of CsaV3_7G006610 vs. TAIR 10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-35
Identity = 92/295 (31.19%), Postives = 153/295 (51.86%), Query Frame = 0

Query: 96  NALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCA 155
           N +IR  V  G   + +  +  M      PDHYTFP VLKAC    ++  G  +H     
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168

Query: 156 NGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTA 215
            GL S +F+ N +V+MYG+CG L +A  + DE+  R   D+VSWNS++  Y Q  +   A
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR---DVVSWNSLVVGYAQNQRFDDA 228

Query: 216 LRIAFRMGNHYSLKLRPDAITLVNILPACAALSLFKMMQEEDI-----KLDVITWSAVIA 275
           L +   M    S+K+  DA T+ ++LPA +  +   +M  +D+     K  +++W+ +I 
Sbjct: 229 LEVCREM---ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 288

Query: 276 GYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNL 335
            Y +     EA++++ +M+  G EP+ V++ S+L  C    AL  GK+ H Y+ +  L  
Sbjct: 289 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 348

Query: 336 NWNDKEDDLLVLNGLIDIVSSQTGPECAALPPWNSYDPFSWISSKEFLTNSEMIA 386
           N       LL+ N LID+ +     +C  L    + D F  + S++ ++ + MI+
Sbjct: 349 N-------LLLENALIDMYA-----KCGCLE--KARDVFENMKSRDVVSWTAMIS 383

BLAST of CsaV3_7G006610 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-34
Identity = 99/366 (27.05%), Postives = 169/366 (46.17%), Query Frame = 0

Query: 35  SLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRLIPS--HSTV 94
           SL+         K  H ++ V G  +   + +   I   +S   ++  +++        +
Sbjct: 26  SLIDSATHKAQLKQIHARLLVLGL-QFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 85

Query: 95  FWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAI 154
           F WNA+IR   +     D L  Y  MQ     PD +TFP +LKAC  +  L+ G  VHA 
Sbjct: 86  FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 145

Query: 155 VCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQS 214
           V   G  ++VF+ N ++A+Y +C  L  A  +F E L      IVSW +I++AY Q G+ 
Sbjct: 146 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQNGEP 205

Query: 215 RTALRIAFRMGNHYSLKLRPDAITLVNILPA----------------------------- 274
             AL I  +M     + ++PD + LV++L A                             
Sbjct: 206 MEALEIFSQM---RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 265

Query: 275 ---------CAALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLE 334
                    C  ++  K++ ++    ++I W+A+I+GYA+ G+  EA+D+F +M    + 
Sbjct: 266 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 325

Query: 335 PNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDIVSSQTG 361
           P+ +++ S +S CA VG+L   +  + YV +       +D  DD+ + + LID+ +    
Sbjct: 326 PDTISITSAISACAQVGSLEQARSMYEYVGR-------SDYRDDVFISSALIDMFAKCGS 379

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43784.21.6e-254100.00hypothetical protein Csa_017356 [Cucumis sativus][more]
XP_004137054.21.1e-18982.42pentatricopeptide repeat-containing protein At5g16860 [Cucumis sativus] >XP_0116... [more]
KAA0031472.12.2e-17978.15pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06925... [more]
KAA0031472.15.6e-1352.34pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06925... [more]
XP_038889862.12.9e-16371.50pentatricopeptide repeat-containing protein At5g16860 [Benincasa hispida] >XP_03... [more]
Match NameE-valueIdentityDescription
Q9LFL54.2e-7236.72Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... [more]
Q9LUJ29.2e-3525.00Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
P0C8991.6e-3431.19Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... [more]
Q9LTV82.3e-3327.05Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9SIT75.1e-3325.00Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0K2255.2e-19082.42DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G0639... [more]
A0A1S3C0G31.1e-17978.15pentatricopeptide repeat-containing protein At5g16860 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7SK771.1e-17978.15Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7SK772.7e-1352.34Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1CP621.7e-13268.70pentatricopeptide repeat-containing protein At5g16860 isoform X2 OS=Momordica ch... [more]
Match NameE-valueIdentityDescription
AT5G16860.13.0e-7336.72Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G22690.16.6e-3625.00CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... [more]
AT3G22690.26.6e-3625.00INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... [more]
AT3G49142.11.1e-3531.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.11.6e-3427.05mitochondrial editing factor 22 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 156..207
e-value: 0.0035
score: 17.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 95..126
e-value: 5.5E-4
score: 17.9
coord: 164..194
e-value: 0.0032
score: 15.5
coord: 263..297
e-value: 1.2E-7
score: 29.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 95..122
e-value: 0.077
score: 13.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 261..308
e-value: 4.0E-11
score: 42.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 91..125
score: 9.04313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..195
score: 9.898111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..295
score: 11.838262
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 246..321
e-value: 3.2E-19
score: 71.0
coord: 27..145
e-value: 3.9E-9
score: 38.1
coord: 147..245
e-value: 2.8E-16
score: 61.4
NoneNo IPR availablePANTHERPTHR47929:SF20BNACNNG07920D PROTEINcoord: 246..350
coord: 195..250
NoneNo IPR availablePANTHERPTHR47929:SF20BNACNNG07920D PROTEINcoord: 31..222
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 31..222
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 195..250
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 246..350

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G006610.1CsaV3_7G006610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding