CsaV3_7G006530 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G006530
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 4051185 .. 4051487 (-)
RNA-Seq ExpressionCsaV3_7G006530
SyntenyCsaV3_7G006530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCCTGTATCCATTCTAAAGAAGAAGAAGAGATGAAGTCCATCCTTGGTAACCTCAAGGCTGGGAGGCTAATAGATGCGAGAGGGTTGATATTTTTGTTGGGAAGCTTGCACTGGCCCTTAGGTGCTCCTCTGACCTCCCTTTTGGTCTTGTTTACATGACTGAAATGACGTGTCAACAGAATTCGCATTGGTGTGAGCTATTTATAAGCTCCATCTTTTAACTCAAATATGTACAACATTGCTGGTGCTATGTGGTGGCTTTCGAGGCTGCAGACTGCTAATGTCGAACTTGACTAA

mRNA sequence

ATGAAAGCCTGTATCCATTCTAAAGAAGAAGAAGAGATGAAGTCCATCCTTGGTAACCTCAAGGCTGGGAGGCTAATAGATGCGAGAGGGTTGATATTTTTGTTGGGAAGCTTGCACTGGCCCTTAGCTCCATCTTTTAACTCAAATATGTACAACATTGCTGGTGCTATGTGGTGGCTTTCGAGGCTGCAGACTGCTAATGTCGAACTTGACTAA

Coding sequence (CDS)

ATGAAAGCCTGTATCCATTCTAAAGAAGAAGAAGAGATGAAGTCCATCCTTGGTAACCTCAAGGCTGGGAGGCTAATAGATGCGAGAGGGTTGATATTTTTGTTGGGAAGCTTGCACTGGCCCTTAGCTCCATCTTTTAACTCAAATATGTACAACATTGCTGGTGCTATGTGGTGGCTTTCGAGGCTGCAGACTGCTAATGTCGAACTTGACTAA

Protein sequence

MKACIHSKEEEEMKSILGNLKAGRLIDARGLIFLLGSLHWPLAPSFNSNMYNIAGAMWWLSRLQTANVELD*
Homology
BLAST of CsaV3_7G006530 vs. NCBI nr
Match: KGN43721.1 (hypothetical protein Csa_017236 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1  MKACIHSKEEEEMKSILGNLKAGRLIDARGLIFLLGSLHWPLAPSFNSNMYNIAGAMWWL 60
          MKACIHSKEEEEMKSILGNLKAGRLIDARGLIFLLGSLHWPLAPSFNSNMYNIAGAMWWL
Sbjct: 1  MKACIHSKEEEEMKSILGNLKAGRLIDARGLIFLLGSLHWPLAPSFNSNMYNIAGAMWWL 60

Query: 61 SRLQTANVELD 72
          SRLQTANVELD
Sbjct: 61 SRLQTANVELD 71

BLAST of CsaV3_7G006530 vs. ExPASy TrEMBL
Match: A0A0A0K7C7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062870 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.6e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1  MKACIHSKEEEEMKSILGNLKAGRLIDARGLIFLLGSLHWPLAPSFNSNMYNIAGAMWWL 60
          MKACIHSKEEEEMKSILGNLKAGRLIDARGLIFLLGSLHWPLAPSFNSNMYNIAGAMWWL
Sbjct: 1  MKACIHSKEEEEMKSILGNLKAGRLIDARGLIFLLGSLHWPLAPSFNSNMYNIAGAMWWL 60

Query: 61 SRLQTANVELD 72
          SRLQTANVELD
Sbjct: 61 SRLQTANVELD 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43721.11.2e-32100.00hypothetical protein Csa_017236 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7C75.6e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062870 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G006530.1CsaV3_7G006530.1mRNA