CsaV3_7G006490 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G006490
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	copper-transporting ATPase PAA1, chloroplastic-like
Location	chr7: 4018440 .. 4021813 (-)
RNA-Seq Expression	CsaV3_7G006490
Synteny	CsaV3_7G006490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATCTATGTGATTGCATCGAAAATTAGGTATTACCATTATGATATGAGTTTGAGTTTATGATTACAATTTTATAGATAAAAAAAAAAAACATTATTTTAACATGGTTTTCAATACTCAAACCATAACGAATAACTCTAAAATTGACAAAATTCAGTAAACGCAATCAAACACAATTCAATTACGTTTGCGATTACGATTTATGTATCGATCAAATTTAATTAGGATTTTAGTAACAATAACAAAATGATACATATGTGTGTGTTAAGTAACAATAATAACACAATAATAAGTGAACACATTTTTTTGAAGAAGAGTGGGGGAAAAACCAACGGACACAAAAGCGCCCATCAGTCGAGTGGTTGACCATTTTTCTCCCTCCCTCAGTTACCCGGAGAGATTCATTTCTTCAATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGTACGAGACGAGTTCTTTATGTTTTCAGTTTTCGATTGGTGCTAATTTTGATGGGTTTTGTTCTATTTGGTATAGGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGGTGGTTATATACACTTTTGCTTTCTTCTTGTCTGTTTTACTTGTCATTATCTAAGGAAGATAGATGAGCTATTTGACGATTGGTTTTGAGAAGAATCCATGTTATCCAATAGTATCAAAACCCATAAAGCCCAGATGGACCCAAATGCACCTTATGTTGAGATTCCACATTAGACGAATCAAAAAACCTCACAATGTAAATAGATGGCTACTCCTACCATTGGTACTTGGTTTTGAGAAGAACCCATATTATCTAATCGACTAATCCCTATTTTTTGGTTGCTGGTTGAATTTACAATGTAGAAACTGCATAGTGTAGGACTTGATTGATTTTTCTTATCCTAAAAACAATCTCTTCTTGTTTTATTGATATCTAATTATCTAATTGCATTTTCAGTATTGAAATGACTTGTTTTACATTTCTAGCTCTCCTCTACTGGTGTTAAAGAATATATATATATGGAAGATTAAATTTATCATAATCAACCAGCTTAGATTTTTTATTTGACCACGGTTTAATATGGTATTAAAGCTGGACTTGCGGCTTGATAGTTCCATTTTCTTTTCAATTAGTATTGGTTTCAAACTGACAGTAAGACTACAAACTTTCTCTGCCCTCCAAGTAATTCTTCATTGTTATTCTTTTTGTATTATGAACAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGTCAGCAAGCATCATAAATTCATAACTCATAAGTCACAGCTCATAATCATATCTCATTTATTGCGCTAGCTTCCCCTTTCTTCTTTTGTTGTTGCTGTCAAGATTGCCACTTTCAAATCTTAAGATTTCTTCTTTGCTGTTTGGTTGGGCATCACAACCACCATGCTCACTGACGCTTGAGCTTTTAAGCTAAGATATATGGTTTTCTTATGGTGCTTTTATGTAGTATTATATTTAAAGCTTCCGAAAATCTAGAATCTTTTATGAATCCTATTGTCATCTAACAGCTATAGTTGCTAGAATTCACTTGTTTTGTATTTCTGTTCACCATTCACTGAGAGGTTTTTGACAGATTCCTCCACATTCAATAATGGGATTCTGGGTTCTGAAATTTAGAATTTTGAGTATTTCATATTAGGATTCACCATGTATGATTGAGTGACGGATTTTGCTTCACCAGTTTGAAACGAAGTAGTCTGAAGTCTCCTCCTCTTGTGCTCGTGAAATTTTCTTACACACTTTTTGGGGCCTGATTGTTTTCCATTCTACAATTCTGGTTCTACTTTATTCATGCATAGTTCAAGAATTCAGTTGAAGCTTCCTTGAACTACACAATTTTGCGGCAGCTGAATTGCATAAATTAATTTCACCGATGTCTTATTGGTTAGTGCATTCTCATTCTTGCATGCATTCCAATTCAACTAATGCACAGGAATATCAAAGGGCGATTTCTTTAACTAGCATGTTGTATTTCTAGTGGTTTTGTGTGTGTTTGATCAACTCTTGTTATTACTATAATAAATGATGCTGAGTTTGATGAGACTTGCCAGCTAAGAATTTCTTTCTGTCTTCTGTATATCCAGGGACTTTTGGACTTCCAATTTATTTTTTTCATCTTCTTTCCTCATCCTTAGAAATTGGCTACGAAAGATTAAACCATAAAATCTTGTCACGGATGGTATACAAAGCAAATCAACATCTAGTACTGATAACAAAAACGGCTTAAGAAAATGAAAAGTTACTGTTTTTTTCACATTACATAAATCTACTTATGATAAGTTCGTAATCTCAACTTTTTCTTTATCTCGAAGTTCATGATTCAAACATTGTGAGACTTACAATACAATTAACAGTTCACATGTATTATTCAGAATTTCTGTTATTCTCATAACTTATGTGAACAATGTGGTTCTCTACAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAGTAATGCAAAAGTTCGATGGGGCAAGTGAATTTTATGGTGCTAATGTTATGACACGACATGAATTTCAAGTAGTTCTATCTGCTAACTTGAATTGAACTCAACAATAAGTGCAGAAGCCAAAGAACAGGACTCAATTTGTAGCATATCAATATGTATCAATAAAGTGATTAATTTCAGCAATGGACGGAGTAAAGATTGTTTGGAGACCCTTGATACTGGAAATCTTTTGTTGCATACTGTGAGAAGAGTGACATGTTTCAAGTAGAGTATGAATACGATTGTAGTCTTGGAAGTTGATTACAAACTACAGTTATGGTTTTTTTATGTGCAAATGATATATTATCAGCTGCTGTTAAGAATGTTAGCATTTGAAAAGTTATCTTTTTCTAGAACAGCTTCTCTAGAAACTCTCCCACACTGCTCCCCTCCCACCATTCCCAAACACTAAACATGGATAACAACACATGATCGGGGC

mRNA sequence

ATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAG

Coding sequence (CDS)

ATGGATTCCGCCATATCTCTAATGGCCTCCAATTCCTTTCTCTCCACTCTCTCCTCCACCTCTGTTTCCACTATCTCCACACTTTCTTTCCCGCGTCGAGCTGCTCTTCCTCCCATACACCGTCGTCAGAAATTCATCTCCATTTTTGCGTCAGGTAATGGCAATGGCGGCGTTCGAGGAGAGAGCGGCGGTGGAGGTGGCGGCGGCGATGATGGTGGACCCAAAGGCAGCGATGTCGACTCGAAATTGCTTGCTGGAGAAGCTGACGACGATGCCACGCTGTCTGCGGACGTCATTGTTCTCGGTGTTGAAGGGATGACGTGCAAGGGGTGTTGTGCGAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCGAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAG

Protein sequence

MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGGDVSL*

Homology

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BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_004136875.1 (copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus] >KGN43717.1 hypothetical protein Csa_017069 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 2.4e-90
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRG 60
           MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRG
Sbjct: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRG 60

Query: 61  ESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120
           ESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE
Sbjct: 61  ESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120

Query: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180
           SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG
Sbjct: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180

Query: 181 DVSL 185
           DVSL
Sbjct: 181 DVSL 184

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BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_008455207.1 (PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 324.3 bits (830), Expect = 6.7e-85
Identity = 175/190 (92.11%), Postives = 181/190 (95.26%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60
           MDSAISLMASNSFLSTLS+      TS+STISTLSFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120
           NGGVRGESGGGGGGGDDGGP GSDVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 181 QGAIGGDVSL 185
           QGAIGGDV+L
Sbjct: 181 QGAIGGDVTL 190

[Close]

BLAST of CsaV3_7G006490 vs. NCBI nr
Match: KAA0031482.1 (copper-transporting ATPase PAA1 [Cucumis melo var. makuwa] >TYK06935.1 copper-transporting ATPase PAA1 [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80
Identity = 168/183 (91.80%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60
           MDSAISLMASNSFLSTLS+      TS+STISTLSFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120
           NGGVRGESGGGGGGGDDGGP GSDVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 178
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

[Close]

BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_038887264.1 (copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.6e-76
Identity = 167/197 (84.77%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSS-------------TSVSTISTLSFPRRAALPPIHRRQKFIS 60
           MDSAISLMASN+ LSTLS+             TS+S ISTLSF  RA+LPP+HRRQKFIS
Sbjct: 1   MDSAISLMASNAPLSTLSTISRSFSSLNFTHPTSISPISTLSFSLRASLPPLHRRQKFIS 60

Query: 61  IFASGNGNGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMT 120
            F+SGNGNGGVRGE+ GGGGGGDDGGP G+DVDSKLLAGEADDDATLSADVIVLGV GMT
Sbjct: 61  NFSSGNGNGGVRGEN-GGGGGGDDGGPDGADVDSKLLAGEADDDATLSADVIVLGVGGMT 120

Query: 121 CKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG 180
           CKGC ASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 185
           FSSKVQGQGAIGGDVSL
Sbjct: 181 FSSKVQGQGAIGGDVSL 196

[Close]

BLAST of CsaV3_7G006490 vs. NCBI nr
Match: XP_023553917.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553918.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553920.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 8.0e-70
Identity = 155/194 (79.90%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLS----------STSVSTISTLSFPRRAALPPIHRRQKFISIFA 60
           MDSA+SLMASN+ LST++          STS+S ISTLSF  RAA+PP+HRR KFIS  +
Sbjct: 1   MDSALSLMASNAPLSTITRSFSTLYFTHSTSISPISTLSFSLRAAVPPLHRRHKFISNSS 60

Query: 61  SGNGNGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKG 120
           SGNGNGGVRGES GGGGG DDGGP G DV S LLAGEA+DDATLSAD IVLGV GM CKG
Sbjct: 61  SGNGNGGVRGES-GGGGGDDDGGPDGGDVGSNLLAGEAEDDATLSADAIVLGVGGMRCKG 120

Query: 121 CCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 180
           C ASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSS
Sbjct: 121 CSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGFSS 180

Query: 181 KVQGQGAIGGDVSL 185
           KVQGQGAIGGDVSL
Sbjct: 181 KVQGQGAIGGDVSL 193

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BLAST of CsaV3_7G006490 vs. ExPASy Swiss-Prot
Match: Q9SZC9 (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27
Identity = 81/161 (50.31%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 19  STSVSTISTLSFPRRAALPPIHRRQKFISIFA---------SGNGNGGVRGESGGGGGGG 78
           S   S+ S L     A LP I  R + +S  +          G+G GG  G SGGGGGGG
Sbjct: 65  SRFTSSNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGG 124

Query: 79  DDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHAS 138
            + G    D  SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ AS
Sbjct: 125 SESG----DSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASAS 184

Query: 139 VDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 171
           V+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 185 VNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of CsaV3_7G006490 vs. ExPASy Swiss-Prot
Match: B9DFX7 (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-06
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 99  IVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 158
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 159 LAKHLTTCGFSSK--VQGQG 177
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

[Close]

BLAST of CsaV3_7G006490 vs. ExPASy TrEMBL
Match: A0A0A0K5Z3 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062830 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRG 60
           MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRG
Sbjct: 1   MDSAISLMASNSFLSTLSSTSVSTISTLSFPRRAALPPIHRRQKFISIFASGNGNGGVRG 60

Query: 61  ESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120
           ESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE
Sbjct: 61  ESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILE 120

Query: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180
           SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG
Sbjct: 121 SQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQGAIGG 180

Query: 181 DVSL 185
           DVSL
Sbjct: 181 DVSL 184

[Close]

BLAST of CsaV3_7G006490 vs. ExPASy TrEMBL
Match: A0A1S3BZZ1 (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495426 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.3e-85
Identity = 175/190 (92.11%), Postives = 181/190 (95.26%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60
           MDSAISLMASNSFLSTLS+      TS+STISTLSFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120
           NGGVRGESGGGGGGGDDGGP GSDVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 181 QGAIGGDVSL 185
           QGAIGGDV+L
Sbjct: 181 QGAIGGDVTL 190

[Close]

BLAST of CsaV3_7G006490 vs. ExPASy TrEMBL
Match: A0A5A7SK85 (Copper-transporting ATPase PAA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002460 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 168/183 (91.80%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLSS------TSVSTISTLSFPRRAALPPIHRRQKFISIFASGNG 60
           MDSAISLMASNSFLSTLS+      TS+STISTLSFP RAALPPIHRRQKF+S+FASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 61  NGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120
           NGGVRGESGGGGGGGDDGGP GSDVDSKLLAGEADDDATLSADVIV+GV GMTCKGCCAS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 178
           VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

[Close]

BLAST of CsaV3_7G006490 vs. ExPASy TrEMBL
Match: A0A6J1HFH1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69
Identity = 155/197 (78.68%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLS-------------STSVSTISTLSFPRRAALPPIHRRQKFIS 60
           MDSA+S+MASN+ L TLS             S S+S ISTLSF  RAA+PP+HRR KFIS
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPISTLSFSLRAAVPPLHRRHKFIS 60

Query: 61  IFASGNGNGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMT 120
             +SGNGNGGVRGES GGGGGGDDGGP G DV S LLAGEA+DDA LSAD IVLGV GMT
Sbjct: 61  NSSSGNGNGGVRGES-GGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG 180
           CKGC ASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 185
           FSSKVQGQGAIGGDVSL
Sbjct: 181 FSSKVQGQGAIGGDVSL 196

[Close]

BLAST of CsaV3_7G006490 vs. ExPASy TrEMBL
Match: A0A6J1HX97 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 152/197 (77.16%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MDSAISLMASNSFLSTLS-------------STSVSTISTLSFPRRAALPPIHRRQKFIS 60
           MDSA+S+MASN+ L  LS             S S+S ISTLSF  RAA+PP+HRR KFIS
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPISTLSFSLRAAVPPLHRRHKFIS 60

Query: 61  IFASGNGNGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMT 120
             +SGNGNGGVRGES GGGGGGDDGGP G DV S LL+GEA+DDATLSAD IVLGV GMT
Sbjct: 61  NSSSGNGNGGVRGES-GGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG 180
           CKGC ASVKRILESQPQVS+ASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 185
           FSSKVQGQGAIGG VSL
Sbjct: 181 FSSKVQGQGAIGGGVSL 196

[Close]

BLAST of CsaV3_7G006490 vs. TAIR 10
Match: AT4G33520.1 (P-type ATP-ase 1 )

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 82/166 (49.40%), Postives = 102/166 (61.45%), Query Frame = 0


Query: 19  STSVSTISTLSFPRRAALPPIHRRQKFISIFA---------SGNGNGGVRGESGGGGGGG 78
           S   S+ S L     A LP I  R + +S  +          G+G GG  G SGGGGGGG
Sbjct: 65  SRFTSSNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGG 124

Query: 79  DDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHAS 138
            + G    D  SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ AS
Sbjct: 125 SESG----DSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASAS 184

Query: 139 VDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQGQ 176
           V+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S  +G+
Sbjct: 185 VNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRGE 226

[Close]

BLAST of CsaV3_7G006490 vs. TAIR 10
Match: AT4G33520.2 (P-type ATP-ase 1 )

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-29
Identity = 81/161 (50.31%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 19  STSVSTISTLSFPRRAALPPIHRRQKFISIFA---------SGNGNGGVRGESGGGGGGG 78
           S   S+ S L     A LP I  R + +S  +          G+G GG  G SGGGGGGG
Sbjct: 65  SRFTSSNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGG 124

Query: 79  DDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHAS 138
            + G    D  SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ AS
Sbjct: 125 SESG----DSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASAS 184

Query: 139 VDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 171
           V+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 185 VNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of CsaV3_7G006490 vs. TAIR 10
Match: AT4G33520.3 (P-type ATP-ase 1 )

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-29
Identity = 81/161 (50.31%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 19  STSVSTISTLSFPRRAALPPIHRRQKFISIFA---------SGNGNGGVRGESGGGGGGG 78
           S   S+ S L     A LP I  R + +S  +          G+G GG  G SGGGGGGG
Sbjct: 65  SRFTSSNSALRSLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGG 124

Query: 79  DDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCASVKRILESQPQVSHAS 138
            + G    D  SKL A  +D  +  S+D+I+L V GMTC GC ASVK+ILESQPQV+ AS
Sbjct: 125 SESG----DSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASAS 184

Query: 139 VDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS 171
           V+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Sbjct: 185 VNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of CsaV3_7G006490 vs. TAIR 10
Match: AT5G21930.1 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-07
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 99  IVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 158
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 159 LAKHLTTCGFSSK--VQGQG 177
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

[Close]

BLAST of CsaV3_7G006490 vs. TAIR 10
Match: AT5G21930.2 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-07
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 99  IVLGVEGMTCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVA 158
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 159 LAKHLTTCGFSSK--VQGQG 177
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

The following BLAST results are available for this feature:

BLAST of CsaV3_7G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136875.1	2.4e-90	100.00	copper-transporting ATPase PAA1, chloroplastic [Cucumis sativus] >KGN43717.1 hyp...	[more]
XP_008455207.1	6.7e-85	92.11	PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo]	[more]
KAA0031482.1	2.9e-80	91.80	copper-transporting ATPase PAA1 [Cucumis melo var. makuwa] >TYK06935.1 copper-tr...	[more]
XP_038887264.1	2.6e-76	84.77	copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida]	[more]
XP_023553917.1	8.0e-70	79.90	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo s...	[more]

BLAST of CsaV3_7G006490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZC9	1.0e-27	50.31	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B9DFX7	3.8e-06	42.50	Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_7G006490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Z3	1.2e-90	100.00	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062830 PE=4 SV...	[more]
A0A1S3BZZ1	3.3e-85	92.11	copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5A7SK85	1.4e-80	91.80	Copper-transporting ATPase PAA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1HFH1	1.5e-69	78.68	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1HX97	1.1e-67	77.16	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxi...	[more]

BLAST of CsaV3_7G006490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33520.1	1.1e-29	49.40	P-type ATP-ase 1	[more]
AT4G33520.2	7.3e-29	50.31	P-type ATP-ase 1	[more]
AT4G33520.3	7.3e-29	50.31	P-type ATP-ase 1	[more]
AT5G21930.1	2.7e-07	42.50	P-type ATPase of Arabidopsis 2	[more]
AT5G21930.2	2.7e-07	42.50	P-type ATPase of Arabidopsis 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 103..148 e-value: 4.2E-8 score: 33.5
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 98..172 score: 13.525477
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 103..144 e-value: 4.15262E-10 score: 51.4525
None	No IPR available	GENE3D	3.30.70.100		coord: 97..172 e-value: 1.5E-14 score: 56.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..82
None	No IPR available	PANTHER	PTHR43520:SF22	COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC	coord: 87..171
None	No IPR available	PANTHER	PTHR43520	ATP7, ISOFORM B	coord: 87..171
IPR017969	Heavy-metal-associated, conserved site	PROSITE	PS01047	HMA_1	coord: 103..132
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 99..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G006490.1	CsaV3_7G006490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding