CsaV3_7G005690 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAGGAGTATCTTTTTATTCTATGAAATTTTAAGTTAGCTCATAATTAAATAAGAGCAAATTACAAAAACCACCTCTTAAAATCGAACTCAATTTGAAGGTAAAATTACAAATAACACTGGGTGATTTTTGTAAATTTTCCATTTAAATAATAATCCAAAAGTAAAGGAAGTGCAGCAACGAGTAAAAAATTCAAACATTAACTTGTAGCGCCGCGCGCTCGAGGCCAAAAGAAAAAACCAACCAAAGCAATGAGGAAGCGGAAGGGCAATCGCGCCAATGGATTGATCCAAGTGCCGCTTTAAACCAATTCCTTCGACACGTTCGCTTTCCACTACACTTCACCGCTTTCCTTTCTCTCCCCAAATATTACACTGCCTTGCCTTCCTTCCCGCATGCAAAACCCGCCGTAATCACCACCGCCGCCACGATTCCCCACCAGCCACAGTCCTCCCCTCTCCCCCTCCTTCTCATGCCTTCCACCGTTCCACTTCGCGAAGACTCTTGGACTTTCGACCATACTTCCACTCTCATCCATGCCTGGGGTCAACGTCATCTCGATTTGAACCGCGGCAGTCTTCGCCATAAACACTGGCAAGAGATCGCTGATGCTGTCAACTCCAGCCATGGCCACGACAGGAAGTTCTTTCGTACGGCTATTCAGTGTAAAAACCGTATCGATACGCTTAAGAGGAAGTACAAAATCGAGAAGGTGCGAATTCAAGAATCCGGTGGTAAGTACGTTTGCGCTTGGCCGTTTTTCTCATGCCTTGACGATCTTATAGGGAATAGCCACAAGGCTTCGACGTCGGTCTCCGTGTCTAACTCTCAATCCTCACCGGTTACGTCTCCGAAATTGTCGCTGTTCTCGAAGGTCCCGGTTGCTCCTCGATCCGTAACTAAGAAGCGTCGTTCGACTCACGTTTATAGGAGCTTTTGCGACTCCTACCTTCGTCGGGATGAGAACTTGAATGAGGATGAAGGAAAAGATGGCTTAGATTCTGATAATTCGCTCTCGGGTTCAAGTTTCAAGGACAGAGAGGTAGGTTATAGAAAACTGGCCGAGGCAATAAGGACGATTACTGATATTTATGAGAGAGTGGAGGCAGAAAAACAGAGGCAGGTGTTGGAATTGGAGATGCAACGGATGCAATTCATGAAGGATTTAGAGTATCAGAGAATGCAACTTCTTTTGGACATACACCTTAAGTTTCAAAAGATCAAACGCGCCAGGCGAGCTTCTGAGGCCGGTTAGTGCTTAGCTTCTAACTTCATTTGTCACTTTCTCTATCCCTTCTTGCTTTGTTTTGCTTTATTTCTTGTTGTCGTAGTAGCGAGGTAACTTTAGATTAAGATGATTTCCCATTAGGTTTGTTTCTTCTTATGTTTGCTCGAATTGCTATAGATTAGAAGTAGACGCACCCCATATTCGGATATATTTCTGATGAAAGAGCAGTATGTCTTCGGCGTATACTTGTAGAATACGAATAGGTGGATCAGATTATTTCGTGGCTGTATGGAGAAAGTGTTATAGGAGTAATAGTTGTTTGAATCAAAATTTCACATGATTGGTTAATGGGTTGGGAGGAAAATGAATCAAAATTTGGCATCACTTGCGCATAAACTCTGGGTTTGGCAGTGTTATGAGGTCGTACTAGGGAATGGAACTGTTGAGCCTTCTCAGGGTAAGCTGATTTTTTCGTGGAGGGAATATTTGTCTTCAATTTTACGGTTATATCATCTTGGTTCTCATGATTCGAACTGTTTGAGTCTCAAGCTTATATAAAAACCTTGATCATTGCTGTGAAAAATTTTCATGTAAGGTTTTGCGAGGCGCACTATAGAACTAGAAACTTATTGTTAGCGGTCAAATTAGTTCTTTATGCAAAACTGAAGGACCAAGTGACAATTAGAACATTCGAGATTAGATTAAAGATGAAACTGAAAGTTAATGGATCAAAGTAGGTTTTGAAGAGATTTAAACTCACGTTTCCACATCCCAGGGATGTAATGATGAATCTTTTAAGCATTCTCCTTTTCATTGTGTATTTAGGAAAATGAAGGTGTTTTATCAGAGCTCTGTTCGGTGATTCATGATTCCCCCAACATTTTCATTTTATCATCTAATGGCCTAGTAGTTAGAATAAATTTCATGTCCTTATAATGTGCCCACCACCCTCTTCTCTTTCCGCTAATTTTAATGGTGCATCCATAAAATCAATTATTTCTCTTTCCACGTGAGTGTCATGGGAGCTTAGCTGCTGGGAATAATCCACGGCTGCACAGTGGGAAGGAAGGATTCTTATGGTCTCTTGGGTTAGGAAATAGCTGAGAATGGGAGAGATAGAGTATATGTTAATACGGCCACGTTTCTCATTTTTACTAGACCGTTCCTTCACCCTGTAACTGACAAAAGGAGAAAGTGAGAGCTGTTCTTTCTGCCCAGCTTTGTCATTTTACCAATCTGGGAGTGTTAAGGGAGGACATATTGCATCTATGATCTAATGGCAACACTAGAGGGAGTTGAATAGGGTTGTCTACCAATTTTAATTTTGCAATGCAAATCAACAAGATAAACCTAACATGCAATCTAACAAATTGAAAATAAACTCAGTGCAAAAGTAAAGCAAGTGTAGGAAAAAGATGACACCGAACTTATAGTGGTTCGGCAATGTGCCTATGTCCACTCTCCAAGATTTTTGGTTTTTGAGAATATTCTCTTCCAGTGAGAACAAAACCTACACGACCCTCTTTTCTTTACCTAGGTTAAAGCGAAACCCGGATCCTTTTCAATCTAACCAATTTCTTTTTCACAAACCTTAATAAAAAAAATTCCAATAAAAAACTAAACAAAAAGCGATCCACCTCTAAATAGGTAAGATTCACAAGTTTTGCTTCACAACACTCCAACCAATTTTCTCTCAACAATTACGCTTACAAGAATTTGATAAGAATGAGAGAAATTTTAGCCTTTTGAGCACTTGGATGATGGATCAAAATTGAGTATAGTTTGCTGGAATTTTTCTCTTAATTTTCAAGAAAAGGTGGCTAGAAGAATGAATGAATGATTGATAATAAAAAGGGGGGTTTAACCTCAACCATTGGATCTAGGTTAAAATGATGGATGGTTAAGATTAAATGGGATAGAAAATAAGGGATGGAGTGTAGAGAGCTTCACGATTTTCACCTCTCTTTTTTTTCTTCTCTAAAATGAAAATCCACACGTTGCAAGTTTATGTGGTTCAATATTTTCTCTCTTTTTTCTCCTTTTCTTTTCATCTCTCTCCCACAACTCGCCACATTTCATCTTATCGGTGATCCATGTTTTCCACGTTATTGCCATGTCATTGACCACATCAAAGCTAATTTTACAATCTTGACCCCATCAAAATTAATTTCCAATCTACTTTTACTCATATTTTTGTCTGTAGAGCTTCGATTTGAAAAATTCAAGATGCATCGAAATCGTTTTTTGAACTCTACAAAATAATTACTTTAAAACACTAAAAATCATTAGTACCACAACTTACGTTTGTTATCATCAAAATATTTGGTTTGATTGAAGCCCTAAAGCTAACAACGGCGTGGAATGGAAACTTGTTTAGGAGTCTATAGACATATGTCAGGTTGATGATCTACCTTGATCAGAACTGGTAGGAAGAAATGATTTTGGTTTGGCTTCAGACTGAAATTTACTACCTGGCTTCATAGTTTTGACCTTTATGATGAAAACAAGAGAGAAACCACTGCATTTCAAGTTTTATGTGCTGTTCTTACATTGCAGGCGAGTTGCATCAAGCATGCAACAAGAACATTAGTAAAGACAAAGGGTTAAACATTAACTATCATGAAGCTGTATTAATAAAGCCCCACTTGCTCAATGTTTCAACTGCTCTTGGTTTCTCCTACTTCAAAAATTACATATTAAGTACTGATTTTTAAATTTTACTTCCGTTCAGTCTGTCAGATATCAGATGCAGAGGTCTTTTTTTTTTTTTTTTTTGTCGTGGACAACTAGTTCTTCCTTAGCTATACTTTGTGAAGAAGTTGAAATATTAACGATACTGCATCTCTCCTTCATTATAACAGAAGAGAAGAAGATTCTGACTCAGTTCATTTCTAATATGTTCTCTACTAAAAACAAGATTATGCATGTTATTGGTGAAAAGTCATATGAGTTTGTTGATTGCTTCTCCATGGATTTGGCAAAAGGGGGGGAAAAAGTTTCTCACGTGTTCTTGATTCATGACTTGCTTTTTAAATATCATACAAAGGGGTTAACTATCTCGTGCCTGTCCATTTTTGTTTCAGATTGTTACACGTAGCCAACGGACCATAGTAAAGACTTCTTCATTATTTGAAATAATGAAAGAAGTTGTTTTCATCTGAGGAAAATGAAAAACCCAAAGTAGTAAAGACGTCGATGTTTATTTCTTTTGTGAAAAACACACATGCACAGCACAGCCTTGATGCAGGTCATGATTTCAGCTTAGTTTCGGGCGGAGGATCTGGTGGTGCTGCCTGGCAATGGAATGAACAAGTTTTTGGATTAACCATCATTTCCTCCCTTTTTGTGAAGTTTCCAACAGTTTACGTTTCAGTAATTACTAATGTAATCACCTGCTTATTTTGTTCATCTGAATCAGCTACCCAAATATACACATATATATATATTCTATATATATATTCTATATTTCTCCCTACAAGTTCTGTGCATACTATATGTATTTTATATGTATC ATGCCTTCCACCGTTCCACTTCGCGAAGACTCTTGGACTTTCGACCATACTTCCACTCTCATCCATGCCTGGGGTCAACGTCATCTCGATTTGAACCGCGGCAGTCTTCGCCATAAACACTGGCAAGAGATCGCTGATGCTGTCAACTCCAGCCATGGCCACGACAGGAAGTTCTTTCGTACGGCTATTCAGTGTAAAAACCGTATCGATACGCTTAAGAGGAAGTACAAAATCGAGAAGGTGCGAATTCAAGAATCCGGTGGTAAGTACGTTTGCGCTTGGCCGTTTTTCTCATGCCTTGACGATCTTATAGGGAATAGCCACAAGGCTTCGACGTCGGTCTCCGTGTCTAACTCTCAATCCTCACCGGTTACGTCTCCGAAATTGTCGCTGTTCTCGAAGGTCCCGGTTGCTCCTCGATCCGTAACTAAGAAGCGTCGTTCGACTCACGTTTATAGGAGCTTTTGCGACTCCTACCTTCGTCGGGATGAGAACTTGAATGAGGATGAAGGAAAAGATGGCTTAGATTCTGATAATTCGCTCTCGGGTTCAAGTTTCAAGGACAGAGAGGTAGGTTATAGAAAACTGGCCGAGGCAATAAGGACGATTACTGATATTTATGAGAGAGTGGAGGCAGAAAAACAGAGGCAGGTGTTGGAATTGGAGATGCAACGGATGCAATTCATGAAGGATTTAGAGTATCAGAGAATGCAACTTCTTTTGGACATACACCTTAAGTTTCAAAAGATCAAACGCGCCAGGCGAGCTTCTGAGGCCGATTGTTACACGTAG ATGCCTTCCACCGTTCCACTTCGCGAAGACTCTTGGACTTTCGACCATACTTCCACTCTCATCCATGCCTGGGGTCAACGTCATCTCGATTTGAACCGCGGCAGTCTTCGCCATAAACACTGGCAAGAGATCGCTGATGCTGTCAACTCCAGCCATGGCCACGACAGGAAGTTCTTTCGTACGGCTATTCAGTGTAAAAACCGTATCGATACGCTTAAGAGGAAGTACAAAATCGAGAAGGTGCGAATTCAAGAATCCGGTGGTAAGTACGTTTGCGCTTGGCCGTTTTTCTCATGCCTTGACGATCTTATAGGGAATAGCCACAAGGCTTCGACGTCGGTCTCCGTGTCTAACTCTCAATCCTCACCGGTTACGTCTCCGAAATTGTCGCTGTTCTCGAAGGTCCCGGTTGCTCCTCGATCCGTAACTAAGAAGCGTCGTTCGACTCACGTTTATAGGAGCTTTTGCGACTCCTACCTTCGTCGGGATGAGAACTTGAATGAGGATGAAGGAAAAGATGGCTTAGATTCTGATAATTCGCTCTCGGGTTCAAGTTTCAAGGACAGAGAGGTAGGTTATAGAAAACTGGCCGAGGCAATAAGGACGATTACTGATATTTATGAGAGAGTGGAGGCAGAAAAACAGAGGCAGGTGTTGGAATTGGAGATGCAACGGATGCAATTCATGAAGGATTTAGAGTATCAGAGAATGCAACTTCTTTTGGACATACACCTTAAGTTTCAAAAGATCAAACGCGCCAGGCGAGCTTCTGAGGCCGATTGTTACACGTAG MPSTVPLREDSWTFDHTSTLIHAWGQRHLDLNRGSLRHKHWQEIADAVNSSHGHDRKFFRTAIQCKNRIDTLKRKYKIEKVRIQESGGKYVCAWPFFSCLDDLIGNSHKASTSVSVSNSQSSPVTSPKLSLFSKVPVAPRSVTKKRRSTHVYRSFCDSYLRRDENLNEDEGKDGLDSDNSLSGSSFKDREVGYRKLAEAIRTITDIYERVEAEKQRQVLELEMQRMQFMKDLEYQRMQLLLDIHLKFQKIKRARRASEADCYT* Homology
BLAST of CsaV3_7G005690 vs. NCBI nr
Match: XP_004137029.2 (trihelix transcription factor ASIL2 [Cucumis sativus] >KGN43629.1 hypothetical protein Csa_017125 [Cucumis sativus]) HSP 1 Score: 520.8 bits (1340), Expect = 7.0e-144 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. NCBI nr
Match: XP_016901748.1 (PREDICTED: trihelix transcription factor ASIL1-like isoform X2 [Cucumis melo]) HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135 Identity = 249/260 (95.77%), Postives = 255/260 (98.08%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. NCBI nr
Match: KAA0031562.1 (trihelix transcription factor ASIL1-like isoform X1 [Cucumis melo var. makuwa] >TYK07013.1 trihelix transcription factor ASIL1-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 490.7 bits (1262), Expect = 7.7e-135 Identity = 248/259 (95.75%), Postives = 254/259 (98.07%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. NCBI nr
Match: XP_016901747.1 (PREDICTED: trihelix transcription factor ASIL1-like isoform X1 [Cucumis melo]) HSP 1 Score: 490.7 bits (1262), Expect = 7.7e-135 Identity = 248/259 (95.75%), Postives = 254/259 (98.07%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. NCBI nr
Match: XP_016901749.1 (PREDICTED: trihelix transcription factor ASIL1-like isoform X3 [Cucumis melo]) HSP 1 Score: 490.7 bits (1262), Expect = 7.7e-135 Identity = 248/259 (95.75%), Postives = 254/259 (98.07%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. ExPASy Swiss-Prot
Match: Q9LJG8 (Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana OX=3702 GN=ASIL2 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.7e-23 Identity = 97/333 (29.13%), Postives = 157/333 (47.15%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. ExPASy Swiss-Prot
Match: Q9SYG2 (Trihelix transcription factor ASIL1 OS=Arabidopsis thaliana OX=3702 GN=ASIL1 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.6e-21 Identity = 83/256 (32.42%), Postives = 128/256 (50.00%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. ExPASy TrEMBL
Match: A0A0A0K3T3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048620 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.4e-144 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. ExPASy TrEMBL
Match: A0A1S4E0J4 (trihelix transcription factor ASIL1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495499 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 5.8e-136 Identity = 249/260 (95.77%), Postives = 255/260 (98.08%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. ExPASy TrEMBL
Match: A0A5A7SKG9 (Trihelix transcription factor ASIL1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003290 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135 Identity = 248/259 (95.75%), Postives = 254/259 (98.07%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. ExPASy TrEMBL
Match: A0A1S4E0I0 (trihelix transcription factor ASIL1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495499 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135 Identity = 248/259 (95.75%), Postives = 254/259 (98.07%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. ExPASy TrEMBL
Match: A0A1S4E0K6 (trihelix transcription factor ASIL1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495499 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135 Identity = 248/259 (95.75%), Postives = 254/259 (98.07%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. TAIR 10
Match: AT3G58630.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 178.3 bits (451), Expect = 7.9e-45 Identity = 113/281 (40.21%), Postives = 169/281 (60.14%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. TAIR 10
Match: AT3G11100.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 143.7 bits (361), Expect = 2.2e-34 Identity = 100/256 (39.06%), Postives = 144/256 (56.25%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. TAIR 10
Match: AT5G05550.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29 Identity = 90/256 (35.16%), Postives = 135/256 (52.73%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. TAIR 10
Match: AT5G05550.2 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29 Identity = 90/256 (35.16%), Postives = 135/256 (52.73%), Query Frame = 0
BLAST of CsaV3_7G005690 vs. TAIR 10
Match: AT3G14180.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 110.2 bits (274), Expect = 2.6e-24 Identity = 97/333 (29.13%), Postives = 157/333 (47.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|