CsaV3_7G005570 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACGTCGCTTGGAGGCACACACCTTGGCTTGGCTCTCACGCGCGCTAAGGGCGCCGTTCGCCCTCTCCGCCGTGCTTTTCAGGCAAGTCTCCAATATCCAGTATTATTCATTTTTCTCTATTTTATCAAAATTTGGGATCTTCTTTTGACGAGGAAGAAATTCGATCACTCTTTTATAATTACATTTCAAAATTATTTTCAAGATACAATTAAAATTTAAAAGCTTGAAAAAGTAGTTTCTAAAACTTTTTATAATAAAAAAACATTAGTTAATAATTCAAATGTCTTTGTAAGAATGGTGAGACAATTATTATAGAAATGGAGAATACGTGTGATTCATTTCAAATTTAAAGAAACAATAATGATTAACCTTTTTTTGTTACTTTGATTTAAAAAAAGTTTGATTTGTGAAATGAATGAAAAATATTTGGATGTGTGTAATCAAAATTGGCCGAATGACAAATTTTTGAAAAAGATTGTAATTGAAGGAAATGCGTAGAAAAACCGATACAGGTTATAGTTGCATCCAATTATTGCATGTAATGTATTTCATGGACTTCGAAAAAGTAGAGTTTCAACAAGTTAGGATGTATATTCTCAATTAGTTCTGTTACTATTTGTTTCTCTACATGTGGAGTTTGGGAAGAATACTTCATAATAGATATAGCCCCACCCCCCACTAATATTTTAGAGAGGCTTCACTTATCATCTCTAGACCCTACCATTTTTGAGACCTAAAAAAATGTCTTCAATTTTCTTTCTTTCTTTCTTTCTTTTCTGATAAACTAAGTCTTTATCACTAGGACCATCCCTTAGGAAATTGTGATATTAATTTAACCAAGAAGAAGAAGAAGAAGATGATGATGATGATTTATTAGCCTTCTTTGCAAATTGTTGATTATTTTTACAAATGCTCGTGCCTTTTAAATTTATTATTTCACAAATTTCCATTCTTAAATAATTGCAAAATATTAATGATTGTAATTTAAATAATAATTAGTAAAGCCCCTTATTTGTAGTTCACTAAAATAATTTGAACACTCCAAAATAGTCCTATCCAAATTATTGTTGAAATTCATGAGAAAAGAAAAATATTTAATTATTTTTCTATTTTTTTATGAAAATGTATATTTAAATCAATGGATTAGTCTAAAGCCAACTAAGCAAACTTGATTGATTGAAATAATTAAAAAATTTCTCTGGGTCAATAATAATAAATTAAGTCGAAGCAAATTATAAAGTCAGAATGTTGTTTCTTATAATTAAGAGAAAGAAAATCAATGTGGGAAGATGTTGACTTTGAGTTATAAGAACTTTATGCATAATTTGTTTTTAATATAGGGATTGGATCCTCTAGCAATTTCAGAAGTATTCTCTCCAGCTCAGTACATGGGAGAGAAACAAATCATGGCCATTGATTGTTTCGTATTGAAATTATCAGCCGACCAAACTGATCTTGCTGATCGAAGCGACAACACAGCTGAGATGATCAAGCATGCAATCTACGGTTACTTTTGTCAAAGACGTGGACTTTTGGTCTACTTAGAGGACTCCTCATTGACTCGAATTCAATCTCCTGGTTCTCACCCCATGTACTGGGAAACAACCATGTCAACAAAAATCGACGATTATCGAACAATTGACGGTGTTATGATTGCCCACTCTGGTGAGACCGATGTCATCATCACACGCTTTGGAGATGATCTTAAAACCGGCCCTATGATCACGCGATTGCAAGAGATTTGGAGTATTGATGACGTGGCGTTTAATGTTCCAGGATTGTCTATGGATAGTTTTATCCCACCTAAACAAGTTCAAAAGAATTGA ATGGCAACGTCGCTTGGAGGCACACACCTTGGCTTGGCTCTCACGCGCGCTAAGGGCGCCGTTCGCCCTCTCCGCCGTGCTTTTCAGGCAAGTCTCCAATATCCAGGATTGGATCCTCTAGCAATTTCAGAAGTATTCTCTCCAGCTCAGTACATGGGAGAGAAACAAATCATGGCCATTGATTGTTTCGTATTGAAATTATCAGCCGACCAAACTGATCTTGCTGATCGAAGCGACAACACAGCTGAGATGATCAAGCATGCAATCTACGGTTACTTTTGTCAAAGACGTGGACTTTTGGTCTACTTAGAGGACTCCTCATTGACTCGAATTCAATCTCCTGGTTCTCACCCCATGTACTGGGAAACAACCATGTCAACAAAAATCGACGATTATCGAACAATTGACGGTGTTATGATTGCCCACTCTGGTGAGACCGATGTCATCATCACACGCTTTGGAGATGATCTTAAAACCGGCCCTATGATCACGCGATTGCAAGAGATTTGGAGTATTGATGACGTGGCGTTTAATGTTCCAGGATTGTCTATGGATAGTTTTATCCCACCTAAACAAGTTCAAAAGAATTGA ATGGCAACGTCGCTTGGAGGCACACACCTTGGCTTGGCTCTCACGCGCGCTAAGGGCGCCGTTCGCCCTCTCCGCCGTGCTTTTCAGGCAAGTCTCCAATATCCAGGATTGGATCCTCTAGCAATTTCAGAAGTATTCTCTCCAGCTCAGTACATGGGAGAGAAACAAATCATGGCCATTGATTGTTTCGTATTGAAATTATCAGCCGACCAAACTGATCTTGCTGATCGAAGCGACAACACAGCTGAGATGATCAAGCATGCAATCTACGGTTACTTTTGTCAAAGACGTGGACTTTTGGTCTACTTAGAGGACTCCTCATTGACTCGAATTCAATCTCCTGGTTCTCACCCCATGTACTGGGAAACAACCATGTCAACAAAAATCGACGATTATCGAACAATTGACGGTGTTATGATTGCCCACTCTGGTGAGACCGATGTCATCATCACACGCTTTGGAGATGATCTTAAAACCGGCCCTATGATCACGCGATTGCAAGAGATTTGGAGTATTGATGACGTGGCGTTTAATGTTCCAGGATTGTCTATGGATAGTTTTATCCCACCTAAACAAGTTCAAAAGAATTGA MATSLGGTHLGLALTRAKGAVRPLRRAFQASLQYPGLDPLAISEVFSPAQYMGEKQIMAIDCFVLKLSADQTDLADRSDNTAEMIKHAIYGYFCQRRGLLVYLEDSSLTRIQSPGSHPMYWETTMSTKIDDYRTIDGVMIAHSGETDVIITRFGDDLKTGPMITRLQEIWSIDDVAFNVPGLSMDSFIPPKQVQKN* Homology
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: KAE8645779.1 (hypothetical protein Csa_017351 [Cucumis sativus]) HSP 1 Score: 399.1 bits (1024), Expect = 2.3e-107 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: KAA0043759.1 (uncharacterized protein E6C27_scaffold236G00890 [Cucumis melo var. makuwa] >TYK25374.1 uncharacterized protein E5676_scaffold352G005140 [Cucumis melo var. makuwa]) HSP 1 Score: 364.0 bits (933), Expect = 8.2e-97 Identity = 175/180 (97.22%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_004136553.2 (uncharacterized protein LOC101217417 [Cucumis sativus]) HSP 1 Score: 351.3 bits (900), Expect = 5.5e-93 Identity = 174/180 (96.67%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_008443008.1 (PREDICTED: uncharacterized protein LOC103486737 [Cucumis melo]) HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91 Identity = 169/180 (93.89%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_038906374.1 (uncharacterized protein LOC120092207 [Benincasa hispida]) HSP 1 Score: 344.7 bits (883), Expect = 5.1e-91 Identity = 168/180 (93.33%), Postives = 173/180 (96.11%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. ExPASy TrEMBL
Match: A0A5D3DP47 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005140 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 3.9e-97 Identity = 175/180 (97.22%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. ExPASy TrEMBL
Match: A0A0A0LBR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G797570 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 2.6e-93 Identity = 174/180 (96.67%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. ExPASy TrEMBL
Match: A0A1S3B7U5 (uncharacterized protein LOC103486737 OS=Cucumis melo OX=3656 GN=LOC103486737 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91 Identity = 169/180 (93.89%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. ExPASy TrEMBL
Match: A0A6J1FR88 (uncharacterized protein LOC111447715 OS=Cucurbita moschata OX=3662 GN=LOC111447715 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.4e-88 Identity = 161/180 (89.44%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. ExPASy TrEMBL
Match: A0A6J1KUK6 (uncharacterized protein LOC111498804 OS=Cucurbita maxima OX=3661 GN=LOC111498804 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 9.7e-88 Identity = 161/180 (89.44%), Postives = 169/180 (93.89%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR 10
Match: AT5G06610.1 (Protein of unknown function (DUF620) ) HSP 1 Score: 238.8 bits (608), Expect = 3.7e-63 Identity = 116/180 (64.44%), Postives = 146/180 (81.11%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR 10
Match: AT3G19540.1 (Protein of unknown function (DUF620) ) HSP 1 Score: 189.1 bits (479), Expect = 3.3e-48 Identity = 89/178 (50.00%), Postives = 126/178 (70.79%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR 10
Match: AT1G27690.1 (Protein of unknown function (DUF620) ) HSP 1 Score: 188.3 bits (477), Expect = 5.7e-48 Identity = 89/178 (50.00%), Postives = 124/178 (69.66%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR 10
Match: AT1G79420.1 (Protein of unknown function (DUF620) ) HSP 1 Score: 187.6 bits (475), Expect = 9.7e-48 Identity = 99/191 (51.83%), Postives = 125/191 (65.45%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR 10
Match: AT1G49840.1 (Protein of unknown function (DUF620) ) HSP 1 Score: 181.8 bits (460), Expect = 5.3e-46 Identity = 85/178 (47.75%), Postives = 124/178 (69.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|