CsaV3_7G004320 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G004320
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Epidermal patterning factor-like protein
Location	chr7: 3120713 .. 3121962 (-)
RNA-Seq Expression	CsaV3_7G004320
Synteny	CsaV3_7G004320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGTTTAAGGAGGCACTTTCTATTCTGATCTTTTGTTTCTTCTTCTTTTTTAATTTAGTTCTCATAGTTTTGCAAAGCTCGGATTCCCTGTGATCTCATCACTAAAAAAAAAAAACCTGTCTTTGGCCTGTGACTTGCTTCAATTCTCATAGTTTTTCAGAATCTTTCCCTTTATATATCCTCTTCATTTCCCCTCTTTCTTTACACATTTCCCTCTCTCTAAAAAAACTAATTACTTCTTAATTTCTTCAACTTCTACTCTCAATATCATGAAGCCTTTCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCTCAACACCCATCTCCTCTAGACGCATTTCTCAACAAAACTCACGTAATTCACGCTCTTTTACCCTTTCTTTTTCCTTTTTACTATCGGGAAAAAACCAAAAGCGTAAACAGTACGCAGAGAAATTTACATAGTTTACTAATTAATATGCATGCTAGCTAGCTACCACCACGGAGAAAAAGAGAGTAGTTTTATATACTGAGGTTATAATAGGATTAGTTAGTTTATATATGACACTCTTTTAAACTCTTTACGCCTAAAATCGTAATTAAGTAATTTTGTTATATGTAGATAAGTATATCTGAAACATTTTGTCATTTAATTTTTATGTGTAGGTCATGGCCATCACCGCAAGGGGGCGGCATCATCCTCTGGTAAAGCAGCAATGGTGGTGGTGAAAGAGAAGGCAGCGATGATGACGAGGATGGGGAGAAAAGGGACTGAGACTGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCTTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAGTAATCCAAACCCCCCTTTTTTCTTAATTTCGTTGGAGCAACTTTACAGGGTTGGATGTATAAGGAAAAAAAAGGCTAAAGTTATAGTTTTATTTGATTGTATATCCAATGATTTAGAGACTACTAACTGCAGTGTGACCGTCACACATTGTATGTACAAATATATCGACCAACTGTAGTTTTTCTTAGTAATTTGCGAGTTGTAATCAAAGAGCATTTTAGTAACGTTTTGACAACTTACATATATTTGTTATATGTTCATGTTAGTGATGTATTGATTTTAATAATGTCCTCAACTCTGAAATATTGTTTCCAA

mRNA sequence

ATGAAGCCTTTCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCTCAACACCCATCTCCTCTAGACGCATTTCTCAACAAAACTCACGTCATGGCCATCACCGCAAGGGGGCGGCATCATCCTCTGGTAAAGCAGCAATGGTGGTGGTGAAAGAGAAGGCAGCGATGATGACGAGGATGGGGAGAAAAGGGACTGAGACTGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCTTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAG

Coding sequence (CDS)

ATGAAGCCTTTCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCTCAACACCCATCTCCTCTAGACGCATTTCTCAACAAAACTCACGTCATGGCCATCACCGCAAGGGGGCGGCATCATCCTCTGGTAAAGCAGCAATGGTGGTGGTGAAAGAGAAGGCAGCGATGATGACGAGGATGGGGAGAAAAGGGACTGAGACTGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCTTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAG

Protein sequence

MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP*

Homology

[Close]

BLAST of CsaV3_7G004320 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60
           MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
           RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of CsaV3_7G004320 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 116/124 (93.55%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60
           MKPFTCFSI+FI FLL STPISSRRISQQNSRHGHHRKGAA SSGKAAMVVV EK  MMT
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAA-SSGKAAMVVVNEKVTMMT 60

Query: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  -MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 122

[Close]

BLAST of CsaV3_7G004320 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.4 bits (459), Expect = 4.8e-42
Identity = 96/131 (73.28%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASS-------SGKAAMVVVK 60
           MK   CFS++FIAFLLF  PISSRRISQ NSR GHH K A  S        GK+   V K
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  EKAAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYR 120
             AA +  MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYR
Sbjct: 61  AVAAAV--MGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYR 120

Query: 121 CMCNNKSYPVP 125
           CMCNNKSYPVP
Sbjct: 121 CMCNNKSYPVP 129

[Close]

BLAST of CsaV3_7G004320 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 6.2e-42
Identity = 93/124 (75.00%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60
           M P T FSILFIAF LF TPISSR ISQ+NS HGHHRK  A+++ K  +   ++KA    
Sbjct: 1   MNPSTWFSILFIAFFLFPTPISSRHISQRNSHHGHHRK-MATTTVKEKLYSPEKKAV--- 60

Query: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            +GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  -IGRKGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 119

Query: 121 YPVP 125
           YP+P
Sbjct: 121 YPIP 119

[Close]

BLAST of CsaV3_7G004320 vs. NCBI nr
Match: KAG6572355.1 (Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.2 bits (448), Expect = 9.0e-41
Identity = 95/124 (76.61%), Postives = 99/124 (79.84%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60
           MK  T FSI+FIAFLLF TPISS+RIS QNSRH HHRK AA            E+AA   
Sbjct: 1   MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMAA------------EEAA--- 60

Query: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            MGRKG ETVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  -MGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 108

Query: 121 YPVP 125
           YP+P
Sbjct: 121 YPLP 108

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.8e-26
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 64  RKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 123
           R+  +TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPV
Sbjct: 44  RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPV 103

Query: 124 P 125
           P
Sbjct: 104 P 104

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-11
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 74  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-11
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 71  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 38/124 (30.65%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 4   FTCFSILFIAFLL------FSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAA 63
           F+ F +L + F+L        TP S+     +NS  G      A   GK+ +V+ K +  
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKI 90

Query: 64  MMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 122
                  +    +   GSS P CS  CG C+PC+ V +     +   AE  P A+RC C 
Sbjct: 91  GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCG 150

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.9e-63
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60
           MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
           RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.2e-56
Identity = 116/124 (93.55%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60
           MKPFTCFSI+FI FLL STPISSRRISQQNSRHGHHRKGAA SSGKAAMVVV EK  MMT
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAA-SSGKAAMVVVNEKVTMMT 60

Query: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  -MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 122

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-42
Identity = 96/131 (73.28%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASS-------SGKAAMVVVK 60
           MK   CFS++FIAFLLF  PISSRRISQ NSR GHH K A  S        GK+   V K
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  EKAAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYR 120
             AA +  MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYR
Sbjct: 61  AVAAAV--MGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYR 120

Query: 121 CMCNNKSYPVP 125
           CMCNNKSYPVP
Sbjct: 121 CMCNNKSYPVP 129

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.8e-40
Identity = 89/124 (71.77%), Postives = 96/124 (77.42%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60
           MK   CFS++FIAFLLF  PISSRRISQ NSR GHH K A  S      V   ++ +   
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDS---VRAVEAAKQNSYWP 60

Query: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            + RKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCMCNNKS
Sbjct: 61  ALWRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 121

[Close]

BLAST of CsaV3_7G004320 vs. ExPASy TrEMBL
Match: A0A5A7SMZ1 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003530 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 87/92 (94.57%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 33  HGHHRKGAASSSGKAAMVVVKEKAAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRL 92
           HGHHRKGAA SSGKAAMVVV EK  MMT MGRKGTETVEVAGSSLPDCSHACGSCSPCRL
Sbjct: 15  HGHHRKGAA-SSGKAAMVVVNEKVTMMT-MGRKGTETVEVAGSSLPDCSHACGSCSPCRL 74

Query: 93  VMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           VMISFVCASLQEAETCPMAYRCMCNNKSYPVP
Sbjct: 75  VMISFVCASLQEAETCPMAYRCMCNNKSYPVP 104

[Close]

BLAST of CsaV3_7G004320 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 )

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 64  RKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 123
           R+  +TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPV
Sbjct: 44  RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPV 103

Query: 124 P 125
           P
Sbjct: 104 P 104

[Close]

BLAST of CsaV3_7G004320 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein )

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 74  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of CsaV3_7G004320 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). )

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 71  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of CsaV3_7G004320 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06
Identity = 38/124 (30.65%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 4   FTCFSILFIAFLL------FSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAA 63
           F+ F +L + F+L        TP S+     +NS  G      A   GK+ +V+ K +  
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKI 90

Query: 64  MMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 122
                  +    +   GSS P CS  CG C+PC+ V +     +   AE  P A+RC C 
Sbjct: 91  GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCG 150

[Close]

BLAST of CsaV3_7G004320 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 45.4 bits (106), Expect = 3.8e-05
Identity = 26/77 (33.77%), Postives = 37/77 (48.05%), Query Frame = 0


Query: 45  GKAAMVVVKEKAAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQE 104
           GK+ +V+ K +         +    +   GSS P CS  CG C+PC+ V +     +   
Sbjct: 152 GKSTVVIKKTRKIGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVT 211

Query: 105 AETCPMAYRCMCNNKSY 122
           AE  P A+RC C NK Y
Sbjct: 212 AEYYPEAWRCKCGNKLY 228

The following BLAST results are available for this feature:

BLAST of CsaV3_7G004320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136818.1	1.4e-62	100.00	protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical...	[more]
XP_008455333.1	1.3e-55	93.55	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]
XP_022930814.1	4.8e-42	73.28	uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 unchar...	[more]
XP_038888568.1	6.2e-42	75.00	protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]	[more]
KAG6572355.1	9.0e-41	76.61	Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of CsaV3_7G004320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8I4	3.8e-26	83.61	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE...	[more]
Q8LC53	2.6e-11	60.78	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE...	[more]
C4B8C5	2.6e-11	51.85	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	2.8e-05	30.65	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of CsaV3_7G004320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5P8	6.9e-63	100.00	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047...	[more]
A0A1S3C0N9	6.2e-56	93.55	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522...	[more]
A0A6J1ESJ9	2.3e-42	73.28	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JEL1	2.8e-40	71.77	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A5A7SMZ1	1.1e-39	94.57	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CsaV3_7G004320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20875.1	2.7e-27	83.61	epidermal patterning factor 1	[more]
AT1G34245.1	1.9e-12	60.78	Putative membrane lipoprotein	[more]
AT1G71866.1	1.9e-12	51.85	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Put...	[more]
AT2G30370.2	2.0e-06	30.65	allergen-related	[more]
AT2G30370.1	3.8e-05	33.77	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 73..122 e-value: 4.1E-15 score: 55.5
None	No IPR available	PANTHER	PTHR33109:SF41	PROTEIN EPIDERMAL PATTERNING FACTOR 1	coord: 5..124
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 5..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G004320.1	CsaV3_7G004320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010374	stomatal complex development