CsaV3_7G004090 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G004090
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Wound-responsive family protein
Location	chr7: 2996036 .. 2996284 (+)
RNA-Seq Expression	CsaV3_7G004090
Synteny	CsaV3_7G004090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCATCAACAAGAGCTTTGGTTGTAGCAGCCACCGTCGGCGTCGTGGAAGCACTGAAGGATCAAGGAATTTGCCGGTGGAATCATCTCTTAAGATCGGCGCACCACTACGCTAGAAACCATGTCCGGTCTATTTCTCAGGCTAAGAAGCTTTCATCCGCCGTGCCTTCCGCCAACCGCTTCCAACAGTCGGAGGAATCCCTGAGGACGGTCATGTATCTTAGTTGTTGGGGTCCTAATAACTGA

mRNA sequence

ATGAGTTCATCAACAAGAGCTTTGGTTGTAGCAGCCACCGTCGGCGTCGTGGAAGCACTGAAGGATCAAGGAATTTGCCGGTGGAATCATCTCTTAAGATCGGCGCACCACTACGCTAGAAACCATGTCCGGTCTATTTCTCAGGCTAAGAAGCTTTCATCCGCCGTGCCTTCCGCCAACCGCTTCCAACAGTCGGAGGAATCCCTGAGGACGGTCATGTATCTTAGTTGTTGGGGTCCTAATAACTGA

Coding sequence (CDS)

ATGAGTTCATCAACAAGAGCTTTGGTTGTAGCAGCCACCGTCGGCGTCGTGGAAGCACTGAAGGATCAAGGAATTTGCCGGTGGAATCATCTCTTAAGATCGGCGCACCACTACGCTAGAAACCATGTCCGGTCTATTTCTCAGGCTAAGAAGCTTTCATCCGCCGTGCCTTCCGCCAACCGCTTCCAACAGTCGGAGGAATCCCTGAGGACGGTCATGTATCTTAGTTGTTGGGGTCCTAATAACTGA

Protein sequence

MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQQSEESLRTVMYLSCWGPNN*

Homology

[Close]

BLAST of CsaV3_7G004090 vs. NCBI nr
Match: XP_004136808.1 (uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED: uncharacterized protein LOC103495545 [Cucumis melo] >KAA0031605.1 Wound-responsive family protein [Cucumis melo var. makuwa] >KGN43576.1 hypothetical protein Csa_020502 [Cucumis sativus] >TYK07057.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          RFQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. NCBI nr
Match: XP_008455358.1 (PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo] >KAA0031604.1 Wound-responsive family protein [Cucumis melo var. makuwa] >TYK07056.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 3.2e-34
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. NCBI nr
Match: XP_038888472.1 (uncharacterized protein LOC120078309 [Benincasa hispida])

HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTR LVVAATVGVVEALKDQGICRWNHLLRS HHYARNHVRSISQAKKLSS VPSAN
Sbjct: 1  MSSSTRTLVVAATVGVVEALKDQGICRWNHLLRSTHHYARNHVRSISQAKKLSSTVPSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
            ++SEESLRTVMYLSCWGPNN
Sbjct: 61 HLRRSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. NCBI nr
Match: XP_004136807.1 (uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical protein Csa_020183 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRAL VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV S+SQAKK SSAV SAN
Sbjct: 1  MSSSTRALFVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. NCBI nr
Match: XP_022952159.1 (uncharacterized protein LOC111454920 [Cucurbita moschata])

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSA- 60
          MSSSTRAL+VAA+VGVVEALKDQGICRWNH +RSAHHYA+NHV SISQAKK S+AVP A 
Sbjct: 1  MSSSTRALIVAASVGVVEALKDQGICRWNHFIRSAHHYAKNHVGSISQAKKFSAAVPPAP 60

Query: 61 -NRFQQSEESLRTVMYLSCWGPNN 83
            +  QSEESLRTVMYLSCWGPNN
Sbjct: 61 GKQLHQSEESLRTVMYLSCWGPNN 84

[Close]

BLAST of CsaV3_7G004090 vs. ExPASy TrEMBL
Match: A0A5D3C5F5 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003750 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          RFQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. ExPASy TrEMBL
Match: A0A0A0K6Y8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          RFQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. ExPASy TrEMBL
Match: A0A1S3C0A5 (uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          RFQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. ExPASy TrEMBL
Match: A0A5D3C9S0 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003740 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. ExPASy TrEMBL
Match: A0A1S3C1Y6 (uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of CsaV3_7G004090 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 107.8 bits (268), Expect = 4.1e-24
Identity = 52/83 (62.65%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQ-GICRWNHLLRSAHHYARNHVRSISQAKKL-SSAVPS 60
          MSS+++  +VAA++G VEALKDQ G+CRWN+++RSA+ Y RN++RS+SQAKKL SS++  
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 ANRFQQSEESLRTVMYLSCWGPN 82
           N+ +Q+EESLRTVMYLSCWGP+
Sbjct: 61 TNKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of CsaV3_7G004090 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 98.6 bits (244), Expect = 2.5e-21
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1  MSSSTRALVVAATVGVVEALKDQ-GICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSA 60
          MSS+++A  VA ++G VEALKDQ G+CRWN++LRS + + RN+VRS+SQ K+ SS+  SA
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 --------NRFQQSEESLRTVMYLSCWGPN 82
                   + +++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CsaV3_7G004090 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 48.9 bits (115), Expect = 2.3e-06
Identity = 29/80 (36.25%), Postives = 38/80 (47.50%), Query Frame = 0


Query: 10 VAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQ------ 69
          VA  +  VE LKDQG+ RWN+L R  H  A   VR+I+   + S    S++         
Sbjct: 11 VATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPL 70

Query: 70 ---QSEESLRTVMYLSCWGP 81
               E S    M LSC+GP
Sbjct: 71 STTPFETSFEKAMGLSCFGP 90

The following BLAST results are available for this feature:

BLAST of CsaV3_7G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136808.1	1.8e-37	100.00	uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED...	[more]
XP_008455358.1	3.2e-34	92.68	PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo] >KAA0031604.1 Wou...	[more]
XP_038888472.1	7.1e-34	91.46	uncharacterized protein LOC120078309 [Benincasa hispida]	[more]
XP_004136807.1	1.6e-33	91.46	uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical ...	[more]
XP_022952159.1	1.1e-29	82.14	uncharacterized protein LOC111454920 [Cucurbita moschata]	[more]

BLAST of CsaV3_7G004090 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G004090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5F5	8.7e-38	100.00	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0K6Y8	8.7e-38	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1	[more]
A0A1S3C0A5	8.7e-38	100.00	uncharacterized protein LOC103495545 OS=Cucumis melo OX=3656 GN=LOC103495545 PE=...	[more]
A0A5D3C9S0	1.5e-34	92.68	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C1Y6	1.5e-34	92.68	uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=...	[more]

BLAST of CsaV3_7G004090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	4.1e-24	62.65	Wound-responsive family protein	[more]
AT4G10270.1	2.5e-21	55.56	Wound-responsive family protein	[more]
AT4G33560.1	2.3e-06	36.25	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..80 e-value: 7.7E-32 score: 110.1
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..81
None	No IPR available	PANTHER	PTHR33090:SF56	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G004090.1	CsaV3_7G004090.1	mRNA