CsaV3_7G003480 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G003480
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 2576741 .. 2577087 (-)
RNA-Seq ExpressionCsaV3_7G003480
SyntenyCsaV3_7G003480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACTCGAAATTATTCTTGATGTAGTGAAGTTAAAGATTATTGTTGAAGTAAAGGTTATCCTTGATGAAGCAAAGTCTTTTGCTAGGGGTTTTGGTGTTCACTTCTTTCATGAGATGGTGTTACAATTTTCTGGCCAACCTTCTTGTGCATAAGAGAGCGTAGGAGCTAGTTTTCATCTTCGTTACTTTTTTCTCTTTACCCTACAAACCACCGTAAGAGTTTGTCATCAAAGGCCAGTGAAGTAACTGTTTTTGCAAGTTTTGATTTCAATTTTTGGGCTAAGGCCCACCAAGCCCAACAGGCTCACCAAACCCAGAAAAACCGAGCCGAGGAGCACCACTGA

mRNA sequence

ATGCAACTCGAAATTATTCTTGATGTAGTGAAGTTAAAGATTATTGTTGAAGTAAAGGTTATCCTTGATGAAGCAAAGTCTTTTGCTAGGGGTTTTGGTGTTCACTTCTTTCATGAGATGGCCAGTGAAGTAACTGTTTTTGCAAGTTTTGATTTCAATTTTTGGGCTAAGGCCCACCAAGCCCAACAGGCTCACCAAACCCAGAAAAACCGAGCCGAGGAGCACCACTGA

Coding sequence (CDS)

ATGCAACTCGAAATTATTCTTGATGTAGTGAAGTTAAAGATTATTGTTGAAGTAAAGGTTATCCTTGATGAAGCAAAGTCTTTTGCTAGGGGTTTTGGTGTTCACTTCTTTCATGAGATGGCCAGTGAAGTAACTGTTTTTGCAAGTTTTGATTTCAATTTTTGGGCTAAGGCCCACCAAGCCCAACAGGCTCACCAAACCCAGAAAAACCGAGCCGAGGAGCACCACTGA

Protein sequence

MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQAQQAHQTQKNRAEEHH*
Homology
[Close]
BLAST of CsaV3_7G003480 vs. NCBI nr
Match: KGN43510.1 (hypothetical protein Csa_020312 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60
          MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ
Sbjct: 1  MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60

Query: 61 AQQAHQTQKNRAEEHH 77
          AQQAHQTQKNRAEEHH
Sbjct: 61 AQQAHQTQKNRAEEHH 76

[Close]
BLAST of CsaV3_7G003480 vs. ExPASy TrEMBL
Match: A0A0A0K1K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043030 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60
          MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ
Sbjct: 1  MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60

Query: 61 AQQAHQTQKNRAEEHH 77
          AQQAHQTQKNRAEEHH
Sbjct: 61 AQQAHQTQKNRAEEHH 76

The following BLAST results are available for this feature:
BLAST of CsaV3_7G003480 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43510.12.3e-31100.00hypothetical protein Csa_020312 [Cucumis sativus][more]
BLAST of CsaV3_7G003480 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G003480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1K71.1e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043030 PE=4 SV=1[more]
BLAST of CsaV3_7G003480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G003480.1CsaV3_7G003480.1mRNA