|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGCAACTCGAAATTATTCTTGATGTAGTGAAGTTAAAGATTATTGTTGAAGTAAAGGTTATCCTTGATGAAGCAAAGTCTTTTGCTAGGGGTTTTGGTGTTCACTTCTTTCATGAGATGGTGTTACAATTTTCTGGCCAACCTTCTTGTGCATAAGAGAGCGTAGGAGCTAGTTTTCATCTTCGTTACTTTTTTCTCTTTACCCTACAAACCACCGTAAGAGTTTGTCATCAAAGGCCAGTGAAGTAACTGTTTTTGCAAGTTTTGATTTCAATTTTTGGGCTAAGGCCCACCAAGCCCAACAGGCTCACCAAACCCAGAAAAACCGAGCCGAGGAGCACCACTGA mRNA sequence ATGCAACTCGAAATTATTCTTGATGTAGTGAAGTTAAAGATTATTGTTGAAGTAAAGGTTATCCTTGATGAAGCAAAGTCTTTTGCTAGGGGTTTTGGTGTTCACTTCTTTCATGAGATGGCCAGTGAAGTAACTGTTTTTGCAAGTTTTGATTTCAATTTTTGGGCTAAGGCCCACCAAGCCCAACAGGCTCACCAAACCCAGAAAAACCGAGCCGAGGAGCACCACTGA Coding sequence (CDS) ATGCAACTCGAAATTATTCTTGATGTAGTGAAGTTAAAGATTATTGTTGAAGTAAAGGTTATCCTTGATGAAGCAAAGTCTTTTGCTAGGGGTTTTGGTGTTCACTTCTTTCATGAGATGGCCAGTGAAGTAACTGTTTTTGCAAGTTTTGATTTCAATTTTTGGGCTAAGGCCCACCAAGCCCAACAGGCTCACCAAACCCAGAAAAACCGAGCCGAGGAGCACCACTGA Protein sequence MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQAQQAHQTQKNRAEEHH*
Homology
BLAST of CsaV3_7G003480 vs. NCBI nr
Match: KGN43510.1 (hypothetical protein Csa_020312 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 Query: 1 MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60 MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ Sbjct: 1 MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60
Query: 61 AQQAHQTQKNRAEEHH 77 AQQAHQTQKNRAEEHH Sbjct: 61 AQQAHQTQKNRAEEHH 76
BLAST of CsaV3_7G003480 vs. ExPASy TrEMBL
Match: A0A0A0K1K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043030 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 Query: 1 MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60 MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ Sbjct: 1 MQLEIILDVVKLKIIVEVKVILDEAKSFARGFGVHFFHEMASEVTVFASFDFNFWAKAHQ 60
Query: 61 AQQAHQTQKNRAEEHH 77 AQQAHQTQKNRAEEHH Sbjct: 61 AQQAHQTQKNRAEEHH 76
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN43510.1 | 2.3e-31 | 100.00 | hypothetical protein Csa_020312 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K1K7 | 1.1e-31 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043030 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
|