CsaV3_7G003280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G003280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	glucosidase 2 subunit beta
Location	chr7: 2436742 .. 2439963 (+)
RNA-Seq Expression	CsaV3_7G003280
Synteny	CsaV3_7G003280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCACATTTGATAAGTAAGAATAAGTATATGTATGTGAAAAATTAAAACTATGGCATAGGTGAATTGGTTAAATCATTATTTAAAAAGATAAAACAATTTAATTGTTCATATTATATTCCAACGTTGGTAAAAAGGTAATAACCATTTTGATTAGCCCAAATGGGAACGTCCGAGCGGGGAAGACCGGCACTCGGCTAGTCAAATCTCCGGACTGACTTGCTATTGCGTTCACTCCTTCATCAATTTCACCTCCTCCAATTGCATTGAAGCTTAATCAGACATGGAACCCCGCTCTCCAAAGTCTACCTCCTTCGCTTCGCTGCTTTCCATATGTTTATTCTTCACGTCTGTTCGTTCTGCTCCATCATTCATCGGAGTTCACCCCCTCGGTACCTCTCTCTCTCTCTCTCTCTATCTCACTCTGTTCTTAATGATCCCCCTTGATCTGATTTTTCGAAGCTCAATTATTGAATTTTTATCCCCATTTCTCCCTCTCCAGCTAATTCCCCTTTTTGGGGTATACCCATGTTGTGAATTGATGCTAAATTCGTCTTTTTTTGGTGAATTTTCCTGAATTCAAACGTGTGTTCGATTGCAGATGAGAAGTATTATTCCTCCGAGGTCATAAAATGCAAGGATGGTTCTAGGTCTTTTACTATAGATCGTCTCAATGACAATTTCTGTGACTGCGTTGATGGAACCGATGAGCCTGGTGTGTTCTTACTTCTTACTAAAATCTAGTCATTAGAGTTACTGCTATTATAAGATGAACCTCAAGTTGAAATAGCTGTGAAAGTATGTATTGAACTAAACGCAACAATTACTAGTCATTGTATTATGTTTAACTATTGAAGAAGACTTGCCATGTTTAACCTAGAAAAGCTTGACTTGGTTTTTCTTTCTGAATTTTCATCAACTTGATACTGTATCTATTTTGTCCTGTATCATTAGAATGTAGGAATAGGATAAGGAAAATCGTTAGAAATACAAAATAGCACTTTTTGGCGAATTGTTCTAATGACACATCTTGGTGTGTCATGATCAAAACCGAGACTAATACAAAAACCAAAACTCAACTTTTTAAATGGCATATCCAAAGGAATGATTTTTTTGGGCTTTTTCTCGGTGGAAACTCGGCCAGAAGATCAAGACGAACTGCTTTTTTTCTGCATAAGCTCCCAAAATCTTATTCCCTCCTTATCATAGACACTTTCCGATAAGATCACATACATAATATTTGGAAATGTTTGCGAAAGATTTGGAGAATGCACGCATAAATTCAAAATAATAGTCAGTCCCAGTTTTATCAAGGAGTTCCACCCAAAAAAATTGATGGTCTGAATGTGCCACTAAAAGAAGCTAAATTTTTGTTTGGGTCTCCGTTTCAATTCTGTATGAAAGGTACCATGGTGAAATATGAAAACAATTGGCCAACAAGGGTGCTATTTGTGAATGGTGGAAAATTCAAAATTGAGTGCTATTTCTAAGTAATAAATTCAAATTCCAGCATGGGCAATTGGTCAAGTAAAAAAAAGGAAAACAAACCTTCCCAAATAGCCCAAGAACAGCCCACACTCAGGCACACACTCACTAACCCAGTGCAAGGATCAGACAAGTTTTTTTTCTGTGCTCTGCTGCTGCTGGCTCATGGATTTGACCTCTGATCTTTGTATTTATGTATGTAGGTACATCTGCCTGTGCAAGAGGGAAATTCTATTGTCGGAATATGGGAAGTACACCACGGTTTATTTTTTCTTCCCGTGTCAACGATCATATATGTGGTAACTATCTATCAGATCTTTTAATTTCCTTATTTTTTTATGCATATGACTCAGAAAAGCATGTCGATTGAAACACCATAAATTTATTGATTTGGATTTTAGAACAATCTTTCTATATGGTGTCTGTAATGCAATGAGACAGTCTTATGGCTCATTCGCTACTTTTCCTGATTATTTGTTCTTCCTGCTTTATGTTAAGACAATTTAAGGTCTACATTCAGGTTAAAATCTGCAATTAGTGGTTTAAACTTGACAATCAGCATTCCATTTCTCTAAAACTTTTCCACACAAACCATTTTGTGACATTTCCATAGTCTATCTGCCTTTTTTTTCTACTTATGTTGAATCCACAATTAATTAGAGAAGCTTGGGGTTTTAGTTTCATTTTTAAAATTAAATTCTAGCTCCCTGTTCAATATTTATTTGTAGATTGCTGTGATGGAAGTGATGAATATGAGGGTAATATCTTTTGCCCGAACACATGTGTCATGGGGGGGAATATGTACAAGAGCAAAAATGATATTTCAACCACCCGAGATGTTGATATAGTCATCAGAAAAGTTAAGGAAGAAATCACCAAGGAGGACTTGTTCCAAAAGCTAACTGGTAGGATTTTTTTTTCAATCATTACAAAACAGATACACAATACTCAACTGATCATTGTTGTAACTCTTAACTTGCAATTTTCAGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACAAGTTTTGCAATCCTCATTTGGGCAAACCGTTGTCGTGTGAAATCTAAGAGAAGACGACACCGTTGAAGCGAGCCGCAATCGTCATTCCTTAATCTTCACTATAATCCCAAGTACATCTTCCAGTTCCATATATAACTTCTCCAGTCTATCCTCTTAGTCTAAATTGTTTATCAATCAATGTTCATTCATTCTCCAGGCTTCTCTTATCAGCACGATTACGTGATGTCGTTCTTTCAGATGCTCACAAAGCTCAACACGCTGGATAAAGAACTACTGATCCATTAGTCTTAACAGACCATGATAGATTAGCTGCCTAAACCCAACCTTGTTATTTATATATAAAGATCACAACAACACAATGGATTGCCTACCCAATCTATATCAATGTTGTAACATTTGGGCTAGATTCACTCAATGTACCATATCAAAAAGAACAAATTTTGTTACAATGTTTGTCTTGCACGACCTCAATAACTTTTGTCGAAGTTTGCAGCCTTTGATTATGCAATGAACCAAATGAACGTTGTGTAAAAGTAAAATCTGGTGTACATGAAAGAGGGCAAGTTTTCCAAAAATGGAAACTGGGGTCTCATTTTCAACCTCAAATTCATCTATTCCCAATCGAAGATTCATGTTAATGTTTTTTACATGGACTGAGTGAAAAAATGTGTCAGCTTTTGACATATTACATTTGTTTGTTTTTTTTTTCC

mRNA sequence

ATGGAACCCCGCTCTCCAAAGTCTACCTCCTTCGCTTCGCTGCTTTCCATATGTTTATTCTTCACGTCTGTTCGTTCTGCTCCATCATTCATCGGAGTTCACCCCCTCGATGAGAAGTATTATTCCTCCGAGGTCATAAAATGCAAGGATGGTTCTAGGTCTTTTACTATAGATCGTCTCAATGACAATTTCTGTGACTGCGTTGATGGAACCGATGAGCCTGGTACATCTGCCTGTGCAAGAGGGAAATTCTATTGTCGGAATATGGGAAGTACACCACGGTTTATTTTTTCTTCCCGTGTCAACGATCATATATGTGATTGCTGTGATGGAAGTGATGAATATGAGGGTAATATCTTTTGCCCGAACACATGTGTCATGGGGGGGAATATGTACAAGAGCAAAAATGATATTTCAACCACCCGAGATGTTGATATAGTCATCAGAAAAGTTAAGGAAGAAATCACCAAGGAGGACTTGTTCCAAAAGCTAACTGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACAAGTTTTGCAATCCTCATTTGGGCAAACCGTTGTCGTGTGAAATCTAAGAGAAGACGACACCGTTGA

Coding sequence (CDS)

ATGGAACCCCGCTCTCCAAAGTCTACCTCCTTCGCTTCGCTGCTTTCCATATGTTTATTCTTCACGTCTGTTCGTTCTGCTCCATCATTCATCGGAGTTCACCCCCTCGATGAGAAGTATTATTCCTCCGAGGTCATAAAATGCAAGGATGGTTCTAGGTCTTTTACTATAGATCGTCTCAATGACAATTTCTGTGACTGCGTTGATGGAACCGATGAGCCTGGTACATCTGCCTGTGCAAGAGGGAAATTCTATTGTCGGAATATGGGAAGTACACCACGGTTTATTTTTTCTTCCCGTGTCAACGATCATATATGTGATTGCTGTGATGGAAGTGATGAATATGAGGGTAATATCTTTTGCCCGAACACATGTGTCATGGGGGGGAATATGTACAAGAGCAAAAATGATATTTCAACCACCCGAGATGTTGATATAGTCATCAGAAAAGTTAAGGAAGAAATCACCAAGGAGGACTTGTTCCAAAAGCTAACTGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTCACAAGTTTTGCAATCCTCATTTGGGCAAACCGTTGTCGTGTGAAATCTAAGAGAAGACGACACCGTTGA

Protein sequence

MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSFAILIWANRCRVKSKRRRHR*

Homology

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BLAST of CsaV3_7G003280 vs. NCBI nr
Match: XP_004144515.1 (glucosidase 2 subunit beta [Cucumis sativus] >XP_031744257.1 glucosidase 2 subunit beta [Cucumis sativus] >KGN43490.1 hypothetical protein Csa_020313 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60
           MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL
Sbjct: 1   MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60

Query: 61  NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120
           NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF
Sbjct: 61  NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120

Query: 121 CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF 180
           CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF
Sbjct: 121 CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF 180

Query: 181 AILIWANRCRVKSKRRRHR 200
           AILIWANRCRVKSKRRRHR
Sbjct: 181 AILIWANRCRVKSKRRRHR 199

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BLAST of CsaV3_7G003280 vs. NCBI nr
Match: XP_008455474.1 (PREDICTED: glucosidase 2 subunit beta isoform X1 [Cucumis melo] >XP_016901681.1 PREDICTED: glucosidase 2 subunit beta isoform X1 [Cucumis melo] >KAA0059098.1 glucosidase 2 subunit beta isoform X1 [Cucumis melo var. makuwa] >TYJ99622.1 glucosidase 2 subunit beta isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60
           ME RSPKSTSF SLLSICLFFTSVR+APSF+GVHPLDEKYYSSEVIKCKDGSRSFTIDRL
Sbjct: 1   MEARSPKSTSFVSLLSICLFFTSVRAAPSFLGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60

Query: 61  NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120
           ND+FCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF
Sbjct: 61  NDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120

Query: 121 CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF 180
           CPNTCVMGGNMYKS ND+STTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALT F
Sbjct: 121 CPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIF 180

Query: 181 AILIWANRCRVKSKRRRHR 200
           AILIWANRCRVKSKRRRHR
Sbjct: 181 AILIWANRCRVKSKRRRHR 199

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BLAST of CsaV3_7G003280 vs. NCBI nr
Match: XP_038887466.1 (glucosidase 2 subunit beta [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 3.7e-97
Identity = 178/199 (89.45%), Postives = 187/199 (93.97%), Query Frame = 0


Query: 3   PRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLND 62
           PRSPK TSF SLLSIC FF SVRS PS IGVHPLDEKYY SEVIKCKDGS+SFTIDRLND
Sbjct: 4   PRSPKPTSFVSLLSICFFFDSVRSVPSLIGVHPLDEKYYYSEVIKCKDGSKSFTIDRLND 63

Query: 63  NFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCP 122
           +FCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVND ICDCCDGSDEY+GNIFCP
Sbjct: 64  DFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEYDGNIFCP 123

Query: 123 NTCVMGGN-MYKSKNDISTTRDVDIVI-RKVKEEITKEDLFQKLTGLKLVIILQVALTSF 182
           NTCVMGGN +YKS NDISTTRDVDI++ RKV+EEIT+ED+FQKL GLKLVIILQVALTSF
Sbjct: 124 NTCVMGGNIVYKSNNDISTTRDVDIIVNRKVQEEITEEDIFQKLIGLKLVIILQVALTSF 183

Query: 183 AILIWANRCRVKSKRRRHR 200
           AILIWANRCRVKSKRRRHR
Sbjct: 184 AILIWANRCRVKSKRRRHR 202

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BLAST of CsaV3_7G003280 vs. NCBI nr
Match: XP_022136263.1 (glucosidase 2 subunit beta [Momordica charantia])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 170/197 (86.29%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 4   RSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDN 63
           R PKSTSF S++SIC FF SVRS PS IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLND+
Sbjct: 5   RPPKSTSFVSMISICFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDD 64

Query: 64  FCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPN 123
           FCDCVDGTDEPGTSACARGKFYCRNMGSTP+FIFSS VND ICDCCDGSDEY+GNIFCPN
Sbjct: 65  FCDCVDGTDEPGTSACARGKFYCRNMGSTPQFIFSSHVNDRICDCCDGSDEYDGNIFCPN 124

Query: 124 TCVMGGNM-YKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSFAI 183
           TCVMGGN+ YKS N ISTT+DV IV RKVKEEITKEDLFQKL GLKLVI+LQVALTSFA+
Sbjct: 125 TCVMGGNIAYKSNNYISTTQDVHIVNRKVKEEITKEDLFQKLMGLKLVIVLQVALTSFAV 184

Query: 184 LIWANRCRVKSKRRRHR 200
            IW NRCR +SKRRRHR
Sbjct: 185 FIWVNRCRARSKRRRHR 201

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BLAST of CsaV3_7G003280 vs. NCBI nr
Match: XP_022952390.1 (glucosidase 2 subunit beta [Cucurbita moschata])

HSP 1 Score: 350.9 bits (899), Expect = 7.3e-93
Identity = 169/196 (86.22%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 5   SPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNF 64
           SPKS SF  LLS C FF SVRS PS IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLND+F
Sbjct: 6   SPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDF 65

Query: 65  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNT 124
           CDCVDGTDEPGTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNT
Sbjct: 66  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNT 125

Query: 125 CVMGGN-MYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSFAIL 184
           CVMGGN  YK+   IST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+L
Sbjct: 126 CVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVL 185

Query: 185 IWANRCRVKSKRRRHR 200
           IWANRCR KSKRRRHR
Sbjct: 186 IWANRCRAKSKRRRHR 201

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BLAST of CsaV3_7G003280 vs. ExPASy Swiss-Prot
Match: Q9FM96 (Glucosidase 2 subunit beta OS=Arabidopsis thaliana OX=3702 GN=PSL4 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.2e-39
Identity = 86/162 (53.09%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 10  SFASLLSICLFFTSVRSAPSFIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDNFCDCV 69
           SF  LL+  +  +S      F+G+ P DEKYY SS  IKCKDGS+ FT  +LND+FCDC 
Sbjct: 17  SFLLLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDCS 76

Query: 70  DGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMG 129
           DGTDEPGTSAC  GKFYCRN G +P  +FSSRVND ICDCCDGSDEY+G++ C NTC   
Sbjct: 77  DGTDEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWEA 136

Query: 130 GNMYKS--KNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLK 169
           G   +   K  I T     +VIR+ + E  K  L +    LK
Sbjct: 137 GKAARENLKKKIETYNQ-GLVIRRQEIEQAKVGLEKDAAELK 177

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BLAST of CsaV3_7G003280 vs. ExPASy Swiss-Prot
Match: A2WNF5 (Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica OX=39946 GN=OsI_01383 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 14  LLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNFCDCVDGTDE 73
           LL I     + R     +G+ P DE Y+   VI+C+DGS  F  D+LND+FCDC DGTDE
Sbjct: 11  LLRISASAAASRPPLDTLGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDCPDGTDE 70

Query: 74  PGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMY- 133
           PGTSAC  GKFYC+N G +P  IFSSRVND ICDCCDGSDEY+ N+ C NTC   G    
Sbjct: 71  PGTSACPEGKFYCQNAGHSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWEAGKAAR 130

Query: 134 -KSKNDISTTRDVDIV----IRKVKEEITKEDL-FQKLTGLKLVI 172
            K K  ++T +   ++    I+K K    K++    KL G + ++
Sbjct: 131 DKLKKKVATYKSGVVIRNQEIQKAKVAFAKDEAELAKLKGEEKIL 175

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy Swiss-Prot
Match: Q5NBP9 (Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0276800 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 14  LLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNFCDCVDGTDE 73
           LL I     + R     +G+ P DE Y+   VI+C+DGS  F  D+LND+FCDC DGTDE
Sbjct: 11  LLRISASAAASRPPLDTLGIPPQDEAYFRGGVIRCRDGSGRFARDKLNDDFCDCPDGTDE 70

Query: 74  PGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMY- 133
           PGTSAC  GKFYC+N G +P  IFSSRVND ICDCCDGSDEY+ N+ C NTC   G    
Sbjct: 71  PGTSACPEGKFYCQNAGHSPITIFSSRVNDGICDCCDGSDEYDSNVTCKNTCWEAGKAAR 130

Query: 134 -KSKNDISTTRDVDIV----IRKVKEEITKEDL-FQKLTGLKLVI 172
            K K  ++T +   ++    I+K K    K++    KL G + ++
Sbjct: 131 DKLKKKVATYKSGVVIRNQEIQKAKVAFAKDEAELAKLKGEEKIL 175

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy Swiss-Prot
Match: O08795 (Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-25
Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 40  YYSSEVIKCKDGSRSFTIDRLNDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSS 99
           Y  S+   C DG+ +   D++ND++CDC DG+DEPGT+AC  G F+C N G  P +I SS
Sbjct: 31  YEESKPFTCLDGTATIPFDQVNDDYCDCKDGSDEPGTAACPNGSFHCTNTGYKPLYILSS 90

Query: 100 RVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYK 134
           RVND +CDCCDG+DEY     C NTC   G   K
Sbjct: 91  RVNDGVCDCCDGTDEYNSGTVCENTCREKGRKEK 124

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy Swiss-Prot
Match: P14314 (Glucosidase 2 subunit beta OS=Homo sapiens OX=9606 GN=PRKCSH PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-25
Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 40  YYSSEVIKCKDGSRSFTIDRLNDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSS 99
           Y  S+   C DGS +   D++ND++CDC DG+DEPGT+AC  G F+C N G  P +I S+
Sbjct: 31  YDESKPFTCLDGSATIPFDQVNDDYCDCKDGSDEPGTAACPNGSFHCTNTGYKPLYIPSN 90

Query: 100 RVNDHICDCCDGSDEYEGNIFCPNTC 126
           RVND +CDCCDG+DEY   + C NTC
Sbjct: 91  RVNDGVCDCCDGTDEYNSGVICENTC 116

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy TrEMBL
Match: A0A0A0K1G3 (PRKCSH-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041350 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 8.3e-111
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60
           MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL
Sbjct: 1   MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60

Query: 61  NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120
           NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF
Sbjct: 61  NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120

Query: 121 CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF 180
           CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF
Sbjct: 121 CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF 180

Query: 181 AILIWANRCRVKSKRRRHR 200
           AILIWANRCRVKSKRRRHR
Sbjct: 181 AILIWANRCRVKSKRRRHR 199

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy TrEMBL
Match: A0A1S4E0C8 (glucosidase 2 subunit beta isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495629 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.3e-107
Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60
           ME RSPKSTSF SLLSICLFFTSVR+APSF+GVHPLDEKYYSSEVIKCKDGSRSFTIDRL
Sbjct: 1   MEARSPKSTSFVSLLSICLFFTSVRAAPSFLGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60

Query: 61  NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120
           ND+FCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF
Sbjct: 61  NDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120

Query: 121 CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF 180
           CPNTCVMGGNMYKS ND+STTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALT F
Sbjct: 121 CPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIF 180

Query: 181 AILIWANRCRVKSKRRRHR 200
           AILIWANRCRVKSKRRRHR
Sbjct: 181 AILIWANRCRVKSKRRRHR 199

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy TrEMBL
Match: A0A5D3BIQ3 (Glucosidase 2 subunit beta isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold786G00030 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.3e-107
Identity = 191/199 (95.98%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MEPRSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60
           ME RSPKSTSF SLLSICLFFTSVR+APSF+GVHPLDEKYYSSEVIKCKDGSRSFTIDRL
Sbjct: 1   MEARSPKSTSFVSLLSICLFFTSVRAAPSFLGVHPLDEKYYSSEVIKCKDGSRSFTIDRL 60

Query: 61  NDNFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120
           ND+FCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF
Sbjct: 61  NDDFCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIF 120

Query: 121 CPNTCVMGGNMYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSF 180
           CPNTCVMGGNMYKS ND+STTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALT F
Sbjct: 121 CPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIF 180

Query: 181 AILIWANRCRVKSKRRRHR 200
           AILIWANRCRVKSKRRRHR
Sbjct: 181 AILIWANRCRVKSKRRRHR 199

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy TrEMBL
Match: A0A6J1C765 (glucosidase 2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111008003 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.4e-94
Identity = 170/197 (86.29%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 4   RSPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDN 63
           R PKSTSF S++SIC FF SVRS PS IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLND+
Sbjct: 5   RPPKSTSFVSMISICFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDD 64

Query: 64  FCDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPN 123
           FCDCVDGTDEPGTSACARGKFYCRNMGSTP+FIFSS VND ICDCCDGSDEY+GNIFCPN
Sbjct: 65  FCDCVDGTDEPGTSACARGKFYCRNMGSTPQFIFSSHVNDRICDCCDGSDEYDGNIFCPN 124

Query: 124 TCVMGGNM-YKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSFAI 183
           TCVMGGN+ YKS N ISTT+DV IV RKVKEEITKEDLFQKL GLKLVI+LQVALTSFA+
Sbjct: 125 TCVMGGNIAYKSNNYISTTQDVHIVNRKVKEEITKEDLFQKLMGLKLVIVLQVALTSFAV 184

Query: 184 LIWANRCRVKSKRRRHR 200
            IW NRCR +SKRRRHR
Sbjct: 185 FIWVNRCRARSKRRRHR 201

[Close]

BLAST of CsaV3_7G003280 vs. ExPASy TrEMBL
Match: A0A6J1GLM3 (glucosidase 2 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111455090 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.5e-93
Identity = 169/196 (86.22%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 5   SPKSTSFASLLSICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNF 64
           SPKS SF  LLS C FF SVRS PS IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLND+F
Sbjct: 6   SPKSMSFVLLLSFCFFFASVRSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDF 65

Query: 65  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNT 124
           CDCVDGTDEPGTSACARGKFYCRNMGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNT
Sbjct: 66  CDCVDGTDEPGTSACARGKFYCRNMGSTPRFLFSSRVNDHICDCCDGSDEYDGNIFCPNT 125

Query: 125 CVMGGN-MYKSKNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTSFAIL 184
           CVMGGN  YK+   IST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+L
Sbjct: 126 CVMGGNAAYKNSYYISTSRDVDVINRKVKEEITKEDLFHRLIGLKLVIILQVALTCFAVL 185

Query: 185 IWANRCRVKSKRRRHR 200
           IWANRCR KSKRRRHR
Sbjct: 186 IWANRCRAKSKRRRHR 201

[Close]

BLAST of CsaV3_7G003280 vs. TAIR 10
Match: AT2G42390.1 (protein kinase C substrate, heavy chain-related )

HSP 1 Score: 224.6 bits (571), Expect = 7.3e-59
Identity = 107/189 (56.61%), Postives = 136/189 (71.96%), Query Frame = 0


Query: 16  SICLFFTSVRSAPSFIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDNFCDCVDGTDEPG 75
           S+ +   SV S    +GVHPLDEKY+ S+VIKCKDGS+SFT DRLNDNFCDC+DGTDEPG
Sbjct: 11  SLAVVVISVASTSPLVGVHPLDEKYFDSDVIKCKDGSKSFTRDRLNDNFCDCLDGTDEPG 70

Query: 76  TSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN---MY 135
           TSAC  GKFYCRN+GS+P+F++SSRVND ICDCCDGSDEYE +I CPNTC+MGGN   +Y
Sbjct: 71  TSACPNGKFYCRNIGSSPKFVYSSRVNDRICDCCDGSDEYESSIHCPNTCIMGGNVNYIY 130

Query: 136 KSKNDISTTRDVDIVIRKVKEEIT---KEDLFQKLTGLKLVIILQVALTSFAILIWANRC 195
           K + ++ +           KE  T    +D+ + L G+KLV  LQ+    F +++W  R 
Sbjct: 131 KPRANLKSIHLQLGSTPHPKEFYTIGNLQDMVKNLQGMKLVFALQMVFIGFLVILWMLRS 190

Query: 196 RVKSKRRRH 199
           R +SKRRR+
Sbjct: 191 RARSKRRRY 199

[Close]

BLAST of CsaV3_7G003280 vs. TAIR 10
Match: AT5G56360.1 (calmodulin-binding protein )

HSP 1 Score: 161.8 bits (408), Expect = 5.8e-40
Identity = 86/162 (53.09%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 10  SFASLLSICLFFTSVRSAPSFIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDNFCDCV 69
           SF  LL+  +  +S      F+G+ P DEKYY SS  IKCKDGS+ FT  +LND+FCDC 
Sbjct: 17  SFLLLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDCS 76

Query: 70  DGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMG 129
           DGTDEPGTSAC  GKFYCRN G +P  +FSSRVND ICDCCDGSDEY+G++ C NTC   
Sbjct: 77  DGTDEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWEA 136

Query: 130 GNMYKS--KNDISTTRDVDIVIRKVKEEITKEDLFQKLTGLK 169
           G   +   K  I T     +VIR+ + E  K  L +    LK
Sbjct: 137 GKAARENLKKKIETYNQ-GLVIRRQEIEQAKVGLEKDAAELK 177

The following BLAST results are available for this feature:

BLAST of CsaV3_7G003280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144515.1	1.7e-110	100.00	glucosidase 2 subunit beta [Cucumis sativus] >XP_031744257.1 glucosidase 2 subun...	[more]
XP_008455474.1	1.5e-106	95.98	PREDICTED: glucosidase 2 subunit beta isoform X1 [Cucumis melo] >XP_016901681.1 ...	[more]
XP_038887466.1	3.7e-97	89.45	glucosidase 2 subunit beta [Benincasa hispida]	[more]
XP_022136263.1	1.1e-93	86.29	glucosidase 2 subunit beta [Momordica charantia]	[more]
XP_022952390.1	7.3e-93	86.22	glucosidase 2 subunit beta [Cucurbita moschata]	[more]

BLAST of CsaV3_7G003280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM96	8.2e-39	53.09	Glucosidase 2 subunit beta OS=Arabidopsis thaliana OX=3702 GN=PSL4 PE=2 SV=1	[more]
A2WNF5	1.4e-35	47.27	Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica OX=39946 GN=OsI_01383 P...	[more]
Q5NBP9	1.4e-35	47.27	Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0276...	[more]
O08795	3.0e-25	51.06	Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=1 SV=1	[more]
P14314	5.1e-25	53.49	Glucosidase 2 subunit beta OS=Homo sapiens OX=9606 GN=PRKCSH PE=1 SV=2	[more]

BLAST of CsaV3_7G003280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1G3	8.3e-111	100.00	PRKCSH-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041350...	[more]
A0A1S4E0C8	7.3e-107	95.98	glucosidase 2 subunit beta isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495629 PE...	[more]
A0A5D3BIQ3	7.3e-107	95.98	Glucosidase 2 subunit beta isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1C765	5.4e-94	86.29	glucosidase 2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111008003 PE=4 S...	[more]
A0A6J1GLM3	3.5e-93	86.22	glucosidase 2 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111455090 PE=4 SV...	[more]

BLAST of CsaV3_7G003280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42390.1	7.3e-59	56.61	protein kinase C substrate, heavy chain-related	[more]
AT5G56360.1	5.8e-40	53.09	calmodulin-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028146	Glucosidase II beta subunit, N-terminal	PFAM	PF12999	PRKCSH-like	coord: 13..148 e-value: 3.5E-32 score: 111.6
IPR039794	Glucosidase II beta subunit-like	PANTHER	PTHR12630	N-LINKED OLIGOSACCHARIDE PROCESSING	coord: 20..197
None	No IPR available	PANTHER	PTHR12630:SF17	EXPRESSED PROTEIN	coord: 20..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G003280.1	CsaV3_7G003280.1	mRNA