CsaV3_7G003070 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G003070
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 2298714 .. 2299238 (-)
RNA-Seq ExpressionCsaV3_7G003070
SyntenyCsaV3_7G003070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGTGCCCCTAAGGGTGAACGCTGTCTCCGACTCCCTACCTTTGCCATAATTTGTAAAAAAATGGAATCTCTATTAACCCGCTTTGTTTTCTTTGTAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTGTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGATATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTACGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGCTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAG

mRNA sequence

ATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTGTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGATATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTACGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGCTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAG

Coding sequence (CDS)

ATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTGTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGATATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTACGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGCTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAG

Protein sequence

MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAFDYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEPDRDALLRRIFFTLEGRWGSIFA*
Homology
[Close]
BLAST of CsaV3_7G003070 vs. NCBI nr
Match: XP_011658683.1 (uncharacterized protein LOC105436073 [Cucumis sativus] >KGN43467.1 hypothetical protein Csa_020272 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 2.3e-80
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60
           MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF
Sbjct: 1   MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60

Query: 61  DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120
           DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP
Sbjct: 61  DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120

Query: 121 DRDALLRRIFFTLEGRWGSIFA 143
           DRDALLRRIFFTLEGRWGSIFA
Sbjct: 121 DRDALLRRIFFTLEGRWGSIFA 142

[Close]
BLAST of CsaV3_7G003070 vs. ExPASy TrEMBL
Match: A0A0A0K5B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038180 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60
           MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF
Sbjct: 1   MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60

Query: 61  DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120
           DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP
Sbjct: 61  DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120

Query: 121 DRDALLRRIFFTLEGRWGSIFA 143
           DRDALLRRIFFTLEGRWGSIFA
Sbjct: 121 DRDALLRRIFFTLEGRWGSIFA 142

The following BLAST results are available for this feature:
BLAST of CsaV3_7G003070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658683.12.3e-80100.00uncharacterized protein LOC105436073 [Cucumis sativus] >KGN43467.1 hypothetical ... [more]
BLAST of CsaV3_7G003070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G003070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5B71.1e-80100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038180 PE=4 SV=1[more]
BLAST of CsaV3_7G003070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G003070.1CsaV3_7G003070.1mRNA