CsaV3_7G002500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002500
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 1966316 .. 1966546 (-)
RNA-Seq ExpressionCsaV3_7G002500
SyntenyCsaV3_7G002500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGCCATGTTAGGAGGTAGCACGTACATTGTAAACTGCCACTGCTCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACATGAGTCTGCTTCTTCTTTCATTGGGCCATGCTGACAGCAATGTGCTTGGATGTAGATCTTCAAAAGAGACATCTCCAGTGCTACCATAA

mRNA sequence

ATGCAGGCCATGTTAGGAGGTAGCACGTACATTGTAAACTGCCACTGCTCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACATGAGTCTGCTTCTTCTTTCATTGGGCCATGCTGACAGCAATGTGCTTGGATGTAGATCTTCAAAAGAGACATCTCCAGTGCTACCATAA

Coding sequence (CDS)

ATGCAGGCCATGTTAGGAGGTAGCACGTACATTGTAAACTGCCACTGCTCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACATGAGTCTGCTTCTTCTTTCATTGGGCCATGCTGACAGCAATGTGCTTGGATGTAGATCTTCAAAAGAGACATCTCCAGTGCTACCATAA

Protein sequence

MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADSNVLGCRSSKETSPVLP*
Homology
[Close]
BLAST of CsaV3_7G002500 vs. NCBI nr
Match: KGN43406.1 (hypothetical protein Csa_020315 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60
          MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS
Sbjct: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60

Query: 61 NVLGCRSSKETSPVLP 77
          NVLGCRSSKETSPVLP
Sbjct: 61 NVLGCRSSKETSPVLP 76

[Close]
BLAST of CsaV3_7G002500 vs. ExPASy TrEMBL
Match: A0A0A0K6F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031670 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.2e-38
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60
          MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS
Sbjct: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60

Query: 61 NVLGCRSSKETSPVLP 77
          NVLGCRSSKETSPVLP
Sbjct: 61 NVLGCRSSKETSPVLP 76

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43406.11.3e-37100.00hypothetical protein Csa_020315 [Cucumis sativus][more]
BLAST of CsaV3_7G002500 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G002500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6F36.2e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031670 PE=4 SV=1[more]
BLAST of CsaV3_7G002500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002500.1CsaV3_7G002500.1mRNA