CsaV3_7G002380 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002380
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 1871473 .. 1872569 (-)
RNA-Seq ExpressionCsaV3_7G002380
SyntenyCsaV3_7G002380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTATTTCCATTTAAGATTGGATTTCCCACTCTGCCGTACACATCAAATTCAATAATAAGAATTTTATTTTTCTTTTATTTATTTTTTAATAAAACCATCCTTATTTTTTCCTTTTACTAAACCCTATTTCTCGCTCAGTCATTCTCTCCGTCTATTACTGAACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGTCTCCAAGGTTTTTTTTTTTCGCTTTATTTTGTTTTGTTGGGCTATGTTGGTTTATTCTCTTCACCGACGGAGAAGAAAAATCGATAGTGTTTTTTTTGGGGTTGTTGATTGCTTCTTCAACCAATGTTCAAGTAGTCTGAATGAAATTATAAAGTTAAGAATTTTTATTAGAGGGAAAAAAAGATTGAATCAAGAGGAATAAGGGAAAAAACTTATCATTCCTATCGGTGTTAGTAAATGAAATGATAAAATGTTTAAGAAGATGAACAAAGAAAAAGAGAAAATTCACTTAGTTTGTTTGGCTATAAAAAGACTTGTTGGAACAGAAAGCCTGTGTTTAAATATATTAAAGTTATTGTTATCAATTAAAAACAAAATCAACATTGGACAAATAAACTAGAAAGATAACATTGAGTTTGAGTATGATCGAACGACATCGAATCTTCTTGAATATTGAAGAAACTATGAATGCCTACGAACTGGCATATGGTGGTTTTTGTTAGACAGGCGTAAATTAAATTTATACATATATAAGAAATCTTATGAGGTGTTCATATATATTATGGGGTAGAATTGTAAACAGGTGTGTGTATATTAGTTTAAACTCATGTCATTTTTCAAACAATTGGTTTCATTTTTTTGGGACATCCGAAAACACTGATTTATAATCCTTCCAAATTCAGGGGTTTCAAACAGGGGTTAA

mRNA sequence

ATGTTTTTATTTCCATTTAAGATTGGATTTCCCACTCTGCCTCATTCTCTCCGTCTATTACTGAACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGGGTTTCAAACAGGGGTTAA

Coding sequence (CDS)

ATGTTTTTATTTCCATTTAAGATTGGATTTCCCACTCTGCCTCATTCTCTCCGTCTATTACTGAACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGGGTTTCAAACAGGGGTTAA

Protein sequence

MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPSYTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG*
Homology
[Close]
BLAST of CsaV3_7G002380 vs. NCBI nr
Match: KGN43395.1 (hypothetical protein Csa_020426 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 4.0e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60
           MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS
Sbjct: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60

Query: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 103
           YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG
Sbjct: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 102

[Close]
BLAST of CsaV3_7G002380 vs. ExPASy TrEMBL
Match: A0A0A0K125 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031560 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60
           MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS
Sbjct: 1   MFLFPFKIGFPTLPHSLRLLLNPPPPAALPPLFLLPDGALTAAAASASAFRRIRCCPPPS 60

Query: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 103
           YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG
Sbjct: 61  YTLASSSNLSCLYLFFILLRSTLVQPLVIAAVAHFSGVSNRG 102

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002380 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43395.14.0e-47100.00hypothetical protein Csa_020426 [Cucumis sativus][more]
BLAST of CsaV3_7G002380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G002380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1252.0e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031560 PE=4 SV=1[more]
BLAST of CsaV3_7G002380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002380.1CsaV3_7G002380.1mRNA