CsaV3_7G002020 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G002020
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr7: 1628342 .. 1632298 (-)
RNA-Seq Expression	CsaV3_7G002020
Synteny	CsaV3_7G002020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCCATTCCAGGGCGGAGATTTCTACCCACTCCCCCTCTCAACGACGCTCTCCCTCTCTCCCAACCACACCAATATTCCACTCAAACCCTACGCCGGAGGCTCTCTTCCATTTCCTTCAAGATCCACCCTATTTCTTCTCCCCTTACTTCCTGGTCCTTTCCCAGATCCAAATCCATGTCCTCAATGCGCGATTTCACCCGTACTTCTCTCCGTAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGTAAAGCTGCCTTCGCTAGAGATCTGGAGATGAACGACAACGATGATCATGAAGAAACTACTAAAGCTCTTGGATCTACTTATTCCTCCAGAGGTAGTTTCAAATTCAAACATCTTTTCTATAAAGTTAGGTCTGAGTTCCGTAAACTCATTCGATCTGATCGCGTCGGTCTTCCTCAAACTTTTAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGACGGAGTGAAATAATAATCTTAGCGTGCTATATACACACACCACCGTATAATCGATCATGAAATTCAGGCTCTTATGATCTTATTGAATAATATGCTGCTCTATAATTCCAAGCTAGATTCAGGACAGAAAGAAAAAAAAAATATATCCCAGTTCGGATTTGGCAAAAATGTAGTAACGTTGTTGATGGGTGTCATGTTGTTTGCTTCTTCGATCGTTCTTGGCTTGATTGGATAACTCAGAAAACGCTCATTTGAGACGAAGAAGAACAGAGAGATTATAGAGATCTTCGTTGCAAATTCAATTAAGAAGGGAGATGAAAGAGTTTGAAGTACATAATGAATTTCTACTTTGCTTTTTCTTTTTGGGTATAAGTAACGCAAAATTCCTTTGCTTCTAATTGTTACTATTTTTCTTTCTTGCGTCATCCAATACTATATTTTCTTCTCCACACTTTTTCTTTTTGTTATTTTAGTATTTTCATATTCTTCCTCTTAGCTTTTGGAGATCTATGTATTAATTACCAACAACATTTGAGTTTTGTTTTTAATAATTTTTAAGAATCAAGTCAGACTTAATTTAATTATAATTCCTTTAAATTATATAAGGTACTTTTCTATACTTTGAATATAAAAAAAAAGGGTGTAAAAAGAAAGAGTGAGTGTCGGTGAGGGGATTGAATATAATGGGAAGAAATTTGTGAATAATTAAGATCCGTTTCATATGATATGATACGATATGATATGTCCAATTAAGTGTTATTATGAAGGAAAGGTGGTGTGTCCAATGGTGAGTTCTACACACTGTCGGTCACATAAACTCTCCTTCAATATTGGGGCTTTTATTTTTATTTTTCTTCTTTTTAATAAAATAAATAAATAAGCACTCAATTTTGTATCTTACAAATTCAATTTTTAACTCATAATTATATTAATTTATATAACCCTCCTTATATTCACAATTTTATCTGAACTAAAATATTTATAAAAAATATAGAATTTTAGATTTAGTCTTATTATTTTTATTTACAAATTTTTCATGTATATATTAAGGCATTTTATTAGGATCCCTAAGTGAATTTTTAATATGTCATTTTTCAAATTCACCATAAAATAAAGAAGAATTATTAAATTTAGAATTATGTAAAAGTTGACATCTATATCAATTTAAAATTGAAGAAAAAGAATTAGAGGATTCCGATATATACCTACTTATTTTTTACCATGACCATTAGACTAAATAAGCATTGGGTTCATCGTATTAAAAGGAAAAAACTTATTTTGGTCTAAAGACAAACAAACCTCAAAATCTAATTGATGCGCAAAATGACCATCGAAGTTGAAAGGCTTTATTGGTTCTTTGGAAACTCTATAAAAAGAGAGTTTCTTTTTGTCTAACGAGTTTATGAATTAAAGACTTTAAAAAAAAAATAAAAGGAAAGAGAGCTCCCTATTTATTAAAGCAGTTGAATGCTTCTTGGAATCTTGTATCTTTTGAAGATTTGAAACACTTTTCTTAAACTTCAACTTCAAGAACATTCAAGTAGCTTATATCTGGAGTGAAGTATATACAAATATTCAGAAGAGAGAATTAGAGATCAAATCACATTTTCATATTTCTACGCAAACTCAAATTACTAATTGAGGAACCAGTACAATGTTAAATTTAAAAAGCATTCATGCATTGATTCTAAAAAATGGGTACATTTTCTTCACAATGTCATCATTACAAAACATATGATATGAAGCATATGCAATTCATATAGGAAATTATAGCATAGACATTAGCAATTTAATTAATATAATTATAATTTTCAAACAATATTTTTACAAATGAAAAGTAAGTTGGAGATGACTTTAGAATGCAGCAACTCAGAGATCTCAAGTGATGTCTCTGTAAGGAGTAAATTGTATTTTTGCAAGTGTATAAATTATATGAAATATATACTTTTGATTGAGTTTTTTTTTCTAGTAAGGTTTTAACCGATCATATTTCAGATACGTAATGAATATTTAAAAAGAGTAGTATAAATATTATTAAAAATAGATGTCCCACTATACTTGTGTCCATAGCCACGTGTCACTTCCTTTATCATCCAACGTCTTTGTCATGTGTCTTGAAGATATCAATTCTTAGTAGTCATGAAATTCATTTCATACTTATTAAATTATCTATAAATAGTTTCATTTTGTAGGTTTGTGACACAAAATTCCAAAATAATGAAAACCAGTGGAGATTTTCATAAAAATTTTAATTCTTACAATTTTGTATATTATTTACAATTAATCGGTAGAAATTAACACTAAGGATGGTATTTTGGAAGAAAAAAAAAGTGTAAACTAGACTAAATAGGAATCAAATTTAAAGGATAAAATTATAGTATTTTGAAATTTAGTTAGAAAAATAAAAGAGATTTTTAAAAGAAAAATCATTAAATATAACCGAATGAATAAAAATATTTACACAGTATAGTACAAATTTTATCGATAAAAGTGAATTGACTCGAGATTAAACACAAAATTCAAGTAACATTTAGGCATAGAAACTTGCTAAAAACACTACTAATGTTGAACAAAATTCAGGTAACGGTTCCGTATTTTTTTTAATCATTACACATGTACTACTTGTTTGTTCTTTGATTTAGGTCTTTCGATTATGTTTTTAACTTTTGGTTGTTTATCTATCTTCCTGTTGTATTTTTTAATACTTTGTTTAATTACATGTTTCGATCATCTTATTTATATTTTTATTAGTAAAATTTTCGTTAACAATATATATATATCTATATACCACCGTTGAATACCCTTTAGAATAACGTTGTCTTGATCTCCTCCTCTTTTTTCCAGCCCATCCTTGTTACTTGTCCATTCCCCCCCTTTCTCCATGAATTCGATTGATAAAATTCCTTTTCTTGTTGAACGATAGCTTTGATGTGAAACCAACGAGTATCGTTATCACCCATTTTAATCATTGTTCACTGATCATAGTCTCCAGTACACCTCTTTTGTAACATTGTATGCAACAAAACCTAGACCATCATGTTGATTACAAACAAGAATAAAATAGTTTAAACATTAACTCATCACACATAATGCAACTAATGGTATTCAAAAGAAATAATTTCATCTAAGTGGGTTTATAGGTTTTAAATGATTCACAGCAAGTGGTTCTCAACAAAATCTTTGCAGTTCAGGAGATTCCGATTCCAAACAACTTCACTTGCAGAGCTTCATTGGATTGTTCTCCATTTGTGCCGGTGTCTGTTTATTCGCTCTTTTGCTCCATTTTCTCAACACAATGTGTCAATTCAACCGCCATTTGAAGAAAGATCCAGAAGCTTCAACCACCAGCGCCGACGCGGGTACCGGTGCTACGCCGCTCCGAAAATTCTTGAAGTTTGCAGATAAGAAGGAAAGAAGGACGAGCTATTCGAAGAGGAAGGTCGAAGATGCAATGTCGAGTGAACATGTAGAGGGTTAG

mRNA sequence

ATGACTTCCATTCCAGGGCGGAGATTTCTACCCACTCCCCCTCTCAACGACGCTCTCCCTCTCTCCCAACCACACCAATATTCCACTCAAACCCTACGCCGGAGGCTCTCTTCCATTTCCTTCAAGATCCACCCTATTTCTTCTCCCCTTACTTCCTGGTCCTTTCCCAGATCCAAATCCATGTCCTCAATGCGCGATTTCACCCGTACTTCTCTCCGTAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGTAAAGCTGCCTTCGCTAGAGATCTGGAGATGAACGACAACGATGATCATGAAGAAACTACTAAAGCTCTTGGATCTACTTATTCCTCCAGAGTTAGGTCTGAGTTCCGTAAACTCATTCGATCTGATCGCGTCGGTCTTCCTCAAACTTTTAAATACGATTCGGTTTTAAATGATTCACAGCAAGTGGTTCTCAACAAAATCTTTGCAGTTCAGGAGATTCCGATTCCAAACAACTTCACTTGCAGAGCTTCATTGGATTGTTCTCCATTTGTGCCGAAAGATCCAGAAGCTTCAACCACCAGCGCCGACGCGGGTACCGGTGCTACGCCGCTCCGAAAATTCTTGAAGTTTGCAGATAAGAAGGAAAGAAGGACGAGCTATTCGAAGAGGAAGGTCGAAGATGCAATGTCGAGTGAACATGTAGAGGGTTAG

Coding sequence (CDS)

ATGACTTCCATTCCAGGGCGGAGATTTCTACCCACTCCCCCTCTCAACGACGCTCTCCCTCTCTCCCAACCACACCAATATTCCACTCAAACCCTACGCCGGAGGCTCTCTTCCATTTCCTTCAAGATCCACCCTATTTCTTCTCCCCTTACTTCCTGGTCCTTTCCCAGATCCAAATCCATGTCCTCAATGCGCGATTTCACCCGTACTTCTCTCCGTAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGTAAAGCTGCCTTCGCTAGAGATCTGGAGATGAACGACAACGATGATCATGAAGAAACTACTAAAGCTCTTGGATCTACTTATTCCTCCAGAGTTAGGTCTGAGTTCCGTAAACTCATTCGATCTGATCGCGTCGGTCTTCCTCAAACTTTTAAATACGATTCGGTTTTAAATGATTCACAGCAAGTGGTTCTCAACAAAATCTTTGCAGTTCAGGAGATTCCGATTCCAAACAACTTCACTTGCAGAGCTTCATTGGATTGTTCTCCATTTGTGCCGAAAGATCCAGAAGCTTCAACCACCAGCGCCGACGCGGGTACCGGTGCTACGCCGCTCCGAAAATTCTTGAAGTTTGCAGATAAGAAGGAAAGAAGGACGAGCTATTCGAAGAGGAAGGTCGAAGATGCAATGTCGAGTGAACATGTAGAGGGTTAG

Protein sequence

MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKSMSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRVRSEFRKLIRSDRVGLPQTFKYDSVLNDSQQVVLNKIFAVQEIPIPNNFTCRASLDCSPFVPKDPEASTTSADAGTGATPLRKFLKFADKKERRTSYSKRKVEDAMSSEHVEG*

Homology

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BLAST of CsaV3_7G002020 vs. NCBI nr
Match: KAE8645700.1 (hypothetical protein Csa_020480 [Cucumis sativus])

HSP 1 Score: 459.9 bits (1182), Expect = 1.3e-125
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60
           MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS
Sbjct: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60

Query: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRVRSE 120
           MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRVRSE
Sbjct: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRVRSE 120

Query: 121 FRKLIRSDRVGLPQTFKYDSVLNDSQQVVLNKIFAVQEIPIPNNFTCRASLDCSPFVPKD 180
           FRKLIRSDRVGLPQTFKYDSVLNDSQQVVLNKIFAVQEIPIPNNFTCRASLDCSPFVPKD
Sbjct: 121 FRKLIRSDRVGLPQTFKYDSVLNDSQQVVLNKIFAVQEIPIPNNFTCRASLDCSPFVPKD 180

Query: 181 PEASTTSADAGTGATPLRKFLKFADKKERRTSYSKRKVEDAMSSEHVEG 230
           PEASTTSADAGTGATPLRKFLKFADKKERRTSYSKRKVEDAMSSEHVEG
Sbjct: 181 PEASTTSADAGTGATPLRKFLKFADKKERRTSYSKRKVEDAMSSEHVEG 229

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BLAST of CsaV3_7G002020 vs. NCBI nr
Match: KAA0059605.1 (hypothetical protein E6C27_scaffold54G00270 [Cucumis melo var. makuwa] >TYK08138.1 hypothetical protein E5676_scaffold886G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 6.4e-61
Identity = 129/153 (84.31%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSW-SFPRSK 60
           MTSIP RRFLPTPPLNDALPLSQP QYS+QTLRRRLSSISFKIHPISSPLTSW SF RSK
Sbjct: 1   MTSIPARRFLPTPPLNDALPLSQPDQYSSQTLRRRLSSISFKIHPISSPLTSWSSFRRSK 60

Query: 61  SMSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSR--- 120
           S+SSMRDFTRTSLRKWWDWGWSWILSRK+AFARDLEMNDN+D EE TKALGS Y  R   
Sbjct: 61  SVSSMRDFTRTSLRKWWDWGWSWILSRKSAFARDLEMNDNNDDEE-TKALGSNYCCRGSF 120

Query: 121 --------VRSEFRKLIRSDRVGLPQTFKYDSV 142
                   VRSEFRKLIRSDRVGLPQTFKYDSV
Sbjct: 121 KFKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSV 152

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BLAST of CsaV3_7G002020 vs. NCBI nr
Match: KAG7022775.1 (hypothetical protein SDJN02_16511, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-49
Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60
           MTSIP R FLPT PLNDALP+SQP   STQTLRRRLSSISFKI PISSP+TSWSF RSKS
Sbjct: 1   MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSWSFHRSKS 60

Query: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGS--TYSSRVR 120
           +SS+RD T  SLRKWWDWGWSWILSRKAAFARDLEMND +     +   GS      +VR
Sbjct: 61  VSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVR 120

Query: 121 SEFRKLIRSDRVGLPQTFKYDSV 142
           SEFRKLIRSDRVGLPQTFKYDSV
Sbjct: 121 SEFRKLIRSDRVGLPQTFKYDSV 141

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BLAST of CsaV3_7G002020 vs. NCBI nr
Match: XP_022928235.1 (uncharacterized protein LOC111435129 [Cucurbita moschata])

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-49
Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60
           MTSIP R FLPT PLNDALP+SQP   STQTLRRRLSSISFKI PISSP+TSWSF RSKS
Sbjct: 1   MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSWSFHRSKS 60

Query: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGS--TYSSRVR 120
           +SS+RD T  SLRKWWDWGWSWILSRKAAFARDLEMND +     +   GS      +VR
Sbjct: 61  VSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVR 120

Query: 121 SEFRKLIRSDRVGLPQTFKYDSV 142
           SEFRKLIRSDRVGLPQTFKYDSV
Sbjct: 121 SEFRKLIRSDRVGLPQTFKYDSV 141

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BLAST of CsaV3_7G002020 vs. NCBI nr
Match: XP_038888269.1 (uncharacterized protein LOC120078122 [Benincasa hispida])

HSP 1 Score: 205.7 bits (522), Expect = 4.3e-49
Identity = 111/148 (75.00%), Postives = 117/148 (79.05%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60
           M SIP R FLPT PLNDALP+SQP   S QT+RRRLSSISFKI PISSP+ SW F RSKS
Sbjct: 1   MASIPRRSFLPTRPLNDALPVSQPD--SAQTIRRRLSSISFKIQPISSPVVSWPFRRSKS 60

Query: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSS----- 120
           +SSMRDFT +SLRKWWDWGWSWILSRKAAF RDLEMND     E TKALGS         
Sbjct: 61  VSSMRDFTGSSLRKWWDWGWSWILSRKAAFTRDLEMND-----EETKALGSNCRGSFRHL 120

Query: 121 --RVRSEFRKLIRSDRVGLPQTFKYDSV 142
             +VRSEFRKLIRSDRVGLPQTFKYDSV
Sbjct: 121 FYKVRSEFRKLIRSDRVGLPQTFKYDSV 141

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BLAST of CsaV3_7G002020 vs. ExPASy TrEMBL
Match: A0A0A0K1L8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027010 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.1e-72
Identity = 141/152 (92.76%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60
           MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS
Sbjct: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60

Query: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSR---- 120
           MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSR    
Sbjct: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRGSFK 120

Query: 121 -------VRSEFRKLIRSDRVGLPQTFKYDSV 142
                  VRSEFRKLIRSDRVGLPQTFKYDSV
Sbjct: 121 FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSV 152

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BLAST of CsaV3_7G002020 vs. ExPASy TrEMBL
Match: A0A5A7V189 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00160 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.1e-61
Identity = 129/153 (84.31%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSW-SFPRSK 60
           MTSIP RRFLPTPPLNDALPLSQP QYS+QTLRRRLSSISFKIHPISSPLTSW SF RSK
Sbjct: 1   MTSIPARRFLPTPPLNDALPLSQPDQYSSQTLRRRLSSISFKIHPISSPLTSWSSFRRSK 60

Query: 61  SMSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSR--- 120
           S+SSMRDFTRTSLRKWWDWGWSWILSRK+AFARDLEMNDN+D EE TKALGS Y  R   
Sbjct: 61  SVSSMRDFTRTSLRKWWDWGWSWILSRKSAFARDLEMNDNNDDEE-TKALGSNYCCRGSF 120

Query: 121 --------VRSEFRKLIRSDRVGLPQTFKYDSV 142
                   VRSEFRKLIRSDRVGLPQTFKYDSV
Sbjct: 121 KFKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSV 152

[Close]

BLAST of CsaV3_7G002020 vs. ExPASy TrEMBL
Match: A0A6J1ER56 (uncharacterized protein LOC111435129 OS=Cucurbita moschata OX=3662 GN=LOC111435129 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 9.4e-50
Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60
           MTSIP R FLPT PLNDALP+SQP   STQTLRRRLSSISFKI PISSP+TSWSF RSKS
Sbjct: 1   MTSIPRRSFLPTRPLNDALPVSQPD--STQTLRRRLSSISFKIQPISSPVTSWSFHRSKS 60

Query: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGS--TYSSRVR 120
           +SS+RD T  SLRKWWDWGWSWILSRKAAFARDLEMND +     +   GS      +VR
Sbjct: 61  VSSLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVR 120

Query: 121 SEFRKLIRSDRVGLPQTFKYDSV 142
           SEFRKLIRSDRVGLPQTFKYDSV
Sbjct: 121 SEFRKLIRSDRVGLPQTFKYDSV 141

[Close]

BLAST of CsaV3_7G002020 vs. ExPASy TrEMBL
Match: A0A6J1C433 (uncharacterized protein LOC111007745 OS=Momordica charantia OX=3673 GN=LOC111007745 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.8e-46
Identity = 103/148 (69.59%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60
           MT +P R FLPT PLNDALP+S P   S QTLRRRLSSISFKI PISSP+TSW F RSKS
Sbjct: 1   MTFVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSWPFRRSKS 60

Query: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSS----- 120
           +SSMR+++ +SLRKWWDWGWSWILSRKA FA+DLE+ND++     TK+LGS         
Sbjct: 61  VSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDE-----TKSLGSNCRGSWRHL 120

Query: 121 --RVRSEFRKLIRSDRVGLPQTFKYDSV 142
             +VRSEFRKL+RSDRVGLPQTFKYDSV
Sbjct: 121 FYKVRSEFRKLMRSDRVGLPQTFKYDSV 141

[Close]

BLAST of CsaV3_7G002020 vs. ExPASy TrEMBL
Match: A0A2I4FBL9 (uncharacterized protein LOC108997284 OS=Juglans regia OX=51240 GN=LOC108997284 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.0e-32
Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 7   RRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKSMSSMRD 66
           R F+P  P   ALP+SQ      Q LRRRLSS+S KI PI+SP TSW+F RSKS+SSM +
Sbjct: 11  RSFIPNMPTKQALPVSQADS-QEQGLRRRLSSLSLKIQPITSPATSWAFRRSKSVSSMGE 70

Query: 67  FTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSS-------RVRS 126
           +  +S+R+WWDWGWSWILSRK  FA+DLE+N     EE  K LGS           +VRS
Sbjct: 71  YAGSSIREWWDWGWSWILSRKPIFAKDLELN-----EEEAKMLGSHDKGSWRHVFYKVRS 130

Query: 127 EFRKLIRSDRVGLPQTFKYDS 141
           E RKL+ SD VGLPQT++YDS
Sbjct: 131 EIRKLVGSDHVGLPQTYRYDS 145

[Close]

BLAST of CsaV3_7G002020 vs. TAIR 10
Match: AT4G35320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 9.7e-15
Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 18  ALPLSQ-PHQYSTQ-----TLRRRLSSISFKIHPISSPLTSWSFPRSKSMSSMRDFTRTS 77
           +LP+SQ P+  +T       +RRRLSS+S  +    + + +  FPRSKS+S+M +   +S
Sbjct: 15  SLPVSQRPNAAATADDEPGLIRRRLSSLSLNLSNQPAAIAA-RFPRSKSVSAMGEQAGSS 74

Query: 78  LRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYS--SRVRSEFRKLI-RSD 137
           +++WW+WGWSWILSRK  F RDLE+N ++     ++  GS      ++RS+ R  +  S 
Sbjct: 75  VKEWWEWGWSWILSRKPIFIRDLELNKDEAKSIGSQNRGSIMHVFFKLRSQIRNFMGPSS 134

Query: 138 RVGLPQTFKY 139
              LP + KY
Sbjct: 135 EDSLPLSCKY 143

[Close]

BLAST of CsaV3_7G002020 vs. TAIR 10
Match: AT2G17300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-12
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 18  ALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKSMSSMRDFTRTSLRKWWD 77
           +LP+S         LRRRLSS+S  +   + P T     RSKS+S M +   +S+++WW+
Sbjct: 16  SLPISSTTTDEPGLLRRRLSSLSLNLSR-NQPST---VSRSKSVSDMGEQGGSSVKEWWE 75

Query: 78  WGWSWILSRK-AAFARDLEMNDNDDHEETTKALGSTYSS-------RVRSEFRKLIRSDR 137
           W WSWIL +K   F  DLE+N N    ET  +LG+           ++RSE R+L+R   
Sbjct: 76  WSWSWILLKKLPIFFTDLEVNKN----ETKSSLGNQQRGSFIHVFFKLRSEIRRLLRPSS 135

Query: 138 VGLPQTFKY 139
             LP + K+
Sbjct: 136 DSLPLSCKH 136

The following BLAST results are available for this feature:

BLAST of CsaV3_7G002020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645700.1	1.3e-125	100.00	hypothetical protein Csa_020480 [Cucumis sativus]	[more]
KAA0059605.1	6.4e-61	84.31	hypothetical protein E6C27_scaffold54G00270 [Cucumis melo var. makuwa] >TYK08138...	[more]
KAG7022775.1	1.9e-49	76.92	hypothetical protein SDJN02_16511, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022928235.1	1.9e-49	76.92	uncharacterized protein LOC111435129 [Cucurbita moschata]	[more]
XP_038888269.1	4.3e-49	75.00	uncharacterized protein LOC120078122 [Benincasa hispida]	[more]

BLAST of CsaV3_7G002020 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G002020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1L8	5.1e-72	92.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027010 PE=4 SV=1	[more]
A0A5A7V189	3.1e-61	84.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1ER56	9.4e-50	76.92	uncharacterized protein LOC111435129 OS=Cucurbita moschata OX=3662 GN=LOC1114351...	[more]
A0A6J1C433	2.8e-46	69.59	uncharacterized protein LOC111007745 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A2I4FBL9	1.0e-32	56.74	uncharacterized protein LOC108997284 OS=Juglans regia OX=51240 GN=LOC108997284 P...	[more]

BLAST of CsaV3_7G002020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35320.1	9.7e-15	38.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G17300.1	3.5e-12	37.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..229
None	No IPR available	PANTHER	PTHR35714:SF1	OS02G0715300 PROTEIN	coord: 13..142
None	No IPR available	PANTHER	PTHR35714	OS02G0715300 PROTEIN	coord: 13..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G002020.1	CsaV3_7G002020.1	mRNA