CsaV3_7G001190 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G001190
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like
Location	chr7: 1056594 .. 1057574 (-)
RNA-Seq Expression	CsaV3_7G001190
Synteny	CsaV3_7G001190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAAAAGGAACGTGAAGCTTGGTAAGAGTTCTCCTAATGATAATTCTTTATGGTTTTAGTTCTTACAAGATTGAAAACATCTAAAACTTCATGAATTTGGAGAACAATCAAGGAATTGCACCGTTTTCTGCTTGCATTTGCTATTGAGGTTTCGTGAAATAGAACTTCATTTGTGTTCTTCACTTGATTTTAGAAAGGGAAACTTTGATGGTTGAAGGAACAGGTTTTTCCCTCTAAAAACTGGGTGTTTTTCCTCCCTCCTATACTTTGAAAACAATTTTATTCCTTGTACAATTAAATCTTAAATTTTGTTCTCGTTACTTTATTGTTGATTTTTTCCTTAAAGAAACCTTTTGTTTTCTATTAGCATTTTTACCGTCAATTTTGAAAACATATTCTGATATGGCACTTTCTTACATAATAATAATAATTATTATTTAACCAATTTCAGTAAAAAATAACTCTAATGGACTAAATTTAAGATTTATTTAATATACAACCATTAAAGTTGGACGATTTACAGTATTTGGACTAAAATTGAACAAACTTCAAAATACGGGGGCTAAAATGGTATTTAAATTACATTCTTTGATGCTACAGTCTTTATTTAAACTATTTTATGACATACATACAGGAATCTTGACGGAAATGAAATGGTTTTGATTTCTTGTGCACAAAATTATGTTGAGATATACGGATATCACATCTTGGAGCCATATATAGATCGTGCAATGTTCATATGATAATATTTTCAATTAGCTCTGCTGTTCTTCTTTGCAGGAAAAGCATTCATCATAGTCATAGGTGGGCTTGTGGCAGGTGCAGTAGTTGGTTCAGCAGTTGAGAATTGGTTGCAAGTAGAAATCGTTCCTTTCCTCAGCTTACGGTCTCCAGCCGCTGTGATAAGTGAATTTATTCTCTTCTCTCAATTTTTAGTCTCTTTACTTGAGTTAGGGATGACAAAAGCACTGGATTAA

mRNA sequence

ATGACCAAAAGGAACGTGAAGCTTGGAAAAGCATTCATCATAGTCATAGGTGGGCTTGTGGCAGGTGCAGTAGTTGGTTCAGCAGTTGAGAATTGGTTGCAAGTAGAAATCGTTCCTTTCCTCAGCTTACGGTCTCCAGCCGCTGTGATAAGTGAATTTATTCTCTTCTCTCAATTTTTAGTCTCTTTACTTGAGTTAGGGATGACAAAAGCACTGGATTAA

Coding sequence (CDS)

ATGACCAAAAGGAACGTGAAGCTTGGAAAAGCATTCATCATAGTCATAGGTGGGCTTGTGGCAGGTGCAGTAGTTGGTTCAGCAGTTGAGAATTGGTTGCAAGTAGAAATCGTTCCTTTCCTCAGCTTACGGTCTCCAGCCGCTGTGATAAGTGAATTTATTCTCTTCTCTCAATTTTTAGTCTCTTTACTTGAGTTAGGGATGACAAAAGCACTGGATTAA

Protein sequence

MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFLVSLLELGMTKALD*

Homology

[Close]

BLAST of CsaV3_7G001190 vs. NCBI nr
Match: KGN43270.1 (hypothetical protein Csa_020191 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
          MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL
Sbjct: 1  MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60

Query: 61 VSLLELGMTKALD 74
          VSLLELGMTKALD
Sbjct: 61 VSLLELGMTKALD 73

[Close]

BLAST of CsaV3_7G001190 vs. NCBI nr
Match: XP_022135964.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-20
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTKRN+KLGKA I+V+GGLVAGAVVGSAVENWLQV+IVPFL LRSPAAVISEFILFSQFL
Sbjct: 223 MTKRNMKLGKASIVVVGGLVAGAVVGSAVENWLQVDIVPFLGLRSPAAVISEFILFSQFL 282

Query: 61  VSL 64
           VSL
Sbjct: 283 VSL 285

[Close]

BLAST of CsaV3_7G001190 vs. NCBI nr
Match: KAB5561482.1 (hypothetical protein DKX38_006439 [Salix brachista])

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTK+NVKLGKA II IGGLVAGAVVGSAVENWLQV+IVPFLSL SPAAV+SEFILFSQFL
Sbjct: 224 MTKKNVKLGKATIITIGGLVAGAVVGSAVENWLQVDIVPFLSLHSPAAVVSEFILFSQFL 283

Query: 61  VSL 64
           +SL
Sbjct: 284 ISL 286

[Close]

BLAST of CsaV3_7G001190 vs. NCBI nr
Match: KAG5247961.1 (protein CHAPERONE PROTEIN OF POR [Salix suchowensis])

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTK+NVKLGKA II IGGLVAGAVVGSAVENWLQV+IVPFLSL SPAAV+SEFILFSQFL
Sbjct: 224 MTKKNVKLGKATIITIGGLVAGAVVGSAVENWLQVDIVPFLSLHSPAAVVSEFILFSQFL 283

Query: 61  VSL 64
           +SL
Sbjct: 284 ISL 286

[Close]

BLAST of CsaV3_7G001190 vs. NCBI nr
Match: XP_015893245.1 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 107.1 bits (266), Expect = 6.7e-20
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTKRNVKLGKA II +GGLVAGAVVGSAVENWLQV+IVPFL L SPAAV+SEF+LFSQFL
Sbjct: 232 MTKRNVKLGKATIITVGGLVAGAVVGSAVENWLQVDIVPFLGLHSPAAVVSEFVLFSQFL 291

Query: 61  VSL 64
           VSL
Sbjct: 292 VSL 294

[Close]

BLAST of CsaV3_7G001190 vs. ExPASy TrEMBL
Match: A0A0A0K0N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014560 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-29
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
          MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL
Sbjct: 1  MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60

Query: 61 VSLLELGMTKALD 74
          VSLLELGMTKALD
Sbjct: 61 VSLLELGMTKALD 73

[Close]

BLAST of CsaV3_7G001190 vs. ExPASy TrEMBL
Match: A0A6J1C2Y7 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007789 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.0e-21
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTKRN+KLGKA I+V+GGLVAGAVVGSAVENWLQV+IVPFL LRSPAAVISEFILFSQFL
Sbjct: 223 MTKRNMKLGKASIVVVGGLVAGAVVGSAVENWLQVDIVPFLGLRSPAAVISEFILFSQFL 282

Query: 61  VSL 64
           VSL
Sbjct: 283 VSL 285

[Close]

BLAST of CsaV3_7G001190 vs. ExPASy TrEMBL
Match: A0A5N5N2J7 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_006439 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTK+NVKLGKA II IGGLVAGAVVGSAVENWLQV+IVPFLSL SPAAV+SEFILFSQFL
Sbjct: 224 MTKKNVKLGKATIITIGGLVAGAVVGSAVENWLQVDIVPFLSLHSPAAVVSEFILFSQFL 283

Query: 61  VSL 64
           +SL
Sbjct: 284 ISL 286

[Close]

BLAST of CsaV3_7G001190 vs. ExPASy TrEMBL
Match: A0A6N2LLH8 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS242910 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTK+NVKLGKA II IGGLVAGAVVGSAVENWLQV+IVPFLSL SPAAV+SEFILFSQFL
Sbjct: 224 MTKKNVKLGKATIITIGGLVAGAVVGSAVENWLQVDIVPFLSLHSPAAVVSEFILFSQFL 283

Query: 61  VSL 64
           +SL
Sbjct: 284 ISL 286

[Close]

BLAST of CsaV3_7G001190 vs. ExPASy TrEMBL
Match: A0A6P4AAI0 (protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107427380 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-20
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTKRNVKLGKA II +GGLVAGAVVGSAVENWLQV+IVPFL L SPAAV+SEF+LFSQFL
Sbjct: 232 MTKRNVKLGKATIITVGGLVAGAVVGSAVENWLQVDIVPFLGLHSPAAVVSEFVLFSQFL 291

Query: 61  VSL 64
           VSL
Sbjct: 292 VSL 294

[Close]

BLAST of CsaV3_7G001190 vs. TAIR 10
Match: AT2G20920.1 (Protein of unknown function (DUF3353) )

HSP 1 Score: 93.6 bits (231), Expect = 7.2e-20
Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1   MTKRNVKLGKAFIIVIGGLVAGAVVGSAVENWLQVEIVPFLSLRSPAAVISEFILFSQFL 60
           MTK+ VKLGKA  +  GGLVAGAVVGSA+E WL V++VPFL L SPAAV+SEFI+FSQFL
Sbjct: 222 MTKKKVKLGKAAALTAGGLVAGAVVGSAIETWLHVDVVPFLGLHSPAAVVSEFIVFSQFL 281

Query: 61  VSL 64
           VSL
Sbjct: 282 VSL 284

The following BLAST results are available for this feature:

BLAST of CsaV3_7G001190 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43270.1	1.0e-28	100.00	hypothetical protein Csa_020191 [Cucumis sativus]	[more]
XP_022135964.1	1.0e-20	90.48	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like [Momordica charantia]	[more]
KAB5561482.1	4.0e-20	88.89	hypothetical protein DKX38_006439 [Salix brachista]	[more]
KAG5247961.1	4.0e-20	88.89	protein CHAPERONE PROTEIN OF POR [Salix suchowensis]	[more]
XP_015893245.1	6.7e-20	87.30	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic [Ziziphus jujuba]	[more]

BLAST of CsaV3_7G001190 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G001190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K0N2	5.0e-29	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014560 PE=4 SV=1	[more]
A0A6J1C2Y7	5.0e-21	90.48	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like OS=Momordica charanti...	[more]
A0A5N5N2J7	1.9e-20	88.89	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_006439 PE=4 SV=1	[more]
A0A6N2LLH8	1.9e-20	88.89	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS242910 PE=4 SV=...	[more]
A0A6P4AAI0	3.3e-20	87.30	protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic OS=Ziziphus jujuba OX=3269...	[more]

BLAST of CsaV3_7G001190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20920.1	7.2e-20	74.60	Protein of unknown function (DUF3353)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021788	Protein CHAPERONE-LIKE PROTEIN OF POR1-like	PFAM	PF11833	CPP1-like	coord: 1..63 e-value: 2.8E-13 score: 50.0
IPR021788	Protein CHAPERONE-LIKE PROTEIN OF POR1-like	PANTHER	PTHR33372	FAMILY NOT NAMED	coord: 1..63
None	No IPR available	PANTHER	PTHR33372:SF10	SLR1918 PROTEIN	coord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G001190.1	CsaV3_7G001190.1	mRNA