CsaV3_7G000970 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATTAACAAAGTTTTGTCAATGGGGGTATTAAGACAACTCATTATATCAGTAGAGTTATTTGTTGTACCGTACGCGGACGTATACCTTCCAAACTAAGTTTTGTTAATGTAGTTTCTCCCCCTAATTCCTTTTATATAAATGGAACCCTTTGTGGCTTTTACAAAATCGTCAAACGAAAAATCTTTAACACAAAGCCTTCTTCATCATATAACTTCTCTCGGCCCAGTACACACAACTTTTCCATCGCTCTATCTTGTTTAGAACTGCAGTACTACTAAACAAGAGAGAGTGAGTGTGAGTGTGAGTGTTTGTGTGAGTGTGAGTGTCTGCAGATTGATTTTGATTTTTGTCTTTGTTCCTATGAATTGCTTCCTTGCCAAGTGTGGGACATTAAACCAAGTGCTAAGAATTCGAGAAGATGGTCATAACAGAAAGGAAAGAAAAATAGAAAGAGATGATGATATTGTCATTGGCGAGGCACCAAAAACGATGAAGATCAGCAGGAAGGGGCATCGACGAGTAAGAAGTAAGGAGAGAAAGATGATGCCGTCGTCGTCGAGGTTGCAACGATCACAGATAGAGAGAGTTGAGTTGGGTGGATGGCTTGCAGCATGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAAGGATGAAGTTAAGGAGTTGGAGAAGGAAATCAAAAGGTAGAAGAAAAATTGAAGAAGCCCCTCTAGCCAACAAATGAAACTTCTACTTGAAGAGAAGAGAAGAGGGATGATTTGTATTTGTAATTCTTTTTTAACATTTTTTTTAAAAGGGATATACATTTGTGTAATATCACTTTTAACTTTTAATAAATGAAATTATTGAAT ATGAATTGCTTCCTTGCCAAGTGTGGGACATTAAACCAAGTGCTAAGAATTCGAGAAGATGGTCATAACAGAAAGGAAAGAAAAATAGAAAGAGATGATGATATTGTCATTGGCGAGGCACCAAAAACGATGAAGATCAGCAGGAAGGGGCATCGACGAGTAAGAAGTAAGGAGAGAAAGATGATGCCGTCGTCGTCGAGGTTGCAACGATCACAGATAGAGAGAGTTGAGTTGGGTGGATGGCTTGCAGCATGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAAGGATGAAGTTAAGGAGTTGGAGAAGGAAATCAAAAGGTAG ATGAATTGCTTCCTTGCCAAGTGTGGGACATTAAACCAAGTGCTAAGAATTCGAGAAGATGGTCATAACAGAAAGGAAAGAAAAATAGAAAGAGATGATGATATTGTCATTGGCGAGGCACCAAAAACGATGAAGATCAGCAGGAAGGGGCATCGACGAGTAAGAAGTAAGGAGAGAAAGATGATGCCGTCGTCGTCGAGGTTGCAACGATCACAGATAGAGAGAGTTGAGTTGGGTGGATGGCTTGCAGCATGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAAGGATGAAGTTAAGGAGTTGGAGAAGGAAATCAAAAGGTAG MNCFLAKCGTLNQVLRIREDGHNRKERKIERDDDIVIGEAPKTMKISRKGHRRVRSKERKMMPSSSRLQRSQIERVELGGWLAAWLEEAEGEREKDEVKELEKEIKR* Homology
BLAST of CsaV3_7G000970 vs. NCBI nr
Match: KGN43248.1 (hypothetical protein Csa_020351 [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 7.0e-50 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000970 vs. NCBI nr
Match: KAG6589009.1 (hypothetical protein SDJN03_17574, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-09 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of CsaV3_7G000970 vs. NCBI nr
Match: KAG6572110.1 (hypothetical protein SDJN03_28838, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 72.0 bits (175), Expect = 3.5e-09 Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 0
BLAST of CsaV3_7G000970 vs. NCBI nr
Match: KAG6589008.1 (hypothetical protein SDJN03_17573, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-08 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of CsaV3_7G000970 vs. NCBI nr
Match: KAG7011763.1 (Ubiquitin-conjugating enzyme E2 28 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-05 Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of CsaV3_7G000970 vs. ExPASy TrEMBL
Match: A0A0A0K1A5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G011880 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.4e-50 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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