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CsaV3_7G000070 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAGGTTAGTGAACTCAAAAGATGATATTCTTTTCTTCTTTTCTGTTTTGATTATTGGATGGTGATTCAAAATATATATGTCGTTTAACAAATATTATTGAATACATGTGAAACATATCTATATCTTAACCATAGTTTTTAATATTTCAAACTATTGAAGCTGAAGATAGGTATCATAATTTGGTTTTTTGGGCACTAGTTCCTTTCTATCATGTCGAATATTCTTTGGTTGGTTTTTGAGATTTTTGTATTTTGGTACCAGGCTTAGGTGAGTTTTATGTGCTTGGTTTTGTAGTTTTGTGATTAGGGTTTAGATTTTCTTTATATGGTAGGTGAATATTTTTGAGACTGAGAATAATATTTTGTTGGTTGAATTTATTGAAATTTATTGGTTAGTTTGGTGGCCACGTTCTTTCAAGTATATAATTAATTTTGAGTTGGTATAATTTATTTAAGTTTAACCTTTTAAATATATAGAAATTAGAAATGTGTGTTTGGAATAAAATTTGAAGTATTTAATTTTCAAAATAAGTTCTTTAGAAGAAAACTACCTTTAGTAATCATTCAAAATAGTTTTGGAGTGTTTTTTAAACAATTTTTACCAAAAGAACTTAAATAAAAAAGTTTAAATTGACTTAAAAAACTAGAGCCTAAAATTTTGGTAAAATTGATTCAAGAATAATTTTAAAATTAACACAATTACTCATATTTTTCTATATTTTTCAATCCAACCAACAAAATTAAACATTAAACAAACAAGAGTTCAACAATTTTGTTCTTCTTTTTTCTTTCTTTTGAAAATGTATTCACAAACAAGAGATGAGGAGATGATCGATACAATGCAACATCCTATCGAGATTGGCACACTCCTAACATTCAACATAATTAAGCTTATGGTTGGTTAATTATCTTTAACCAACAAAAGTTGAAAAATATATATAACCCCAAAAAAATGCATAAACTAATGGGAAAACTCCAACCAAAAAGGAAAAACATTTAATTATCATAGAAAAATGTTAGAGCACTAAATAAATTAATGATAAAATATAATCTACTTTCAATTCTAGAATTACAAAAGAAATAATAACAACAATAATAATAATTTTCTTGGTGTCTCTAAAATCACAACTAAACACAAAAGTTGATAATCAAGAAAAATTTAATTACATTAACTCTATATAACACTAAATTAACACAAAACTCAAACAGGTAAAGATATGACATTATTATAACAAAAGTAAGCTTAATTCAAGAGTTATCATCCTGATCTCTTCCATCTTAAAAGATTAAAAGTTGCATTTCTCATCCCAGATCTCTTCCATCTTAAAAGATTAAAAGCTGCATTTCTCATCCCATAATTATTGTATTAAAATAAAAGATATGATGACACTATAAAGATTTAAAACAGAAGAGCATCAGTTGGAACACATGCAAGATCTCCAACTTTGATTCAATGATTTAACTGTGACTTGCTTTAAGCTCTTTTCCCCATTCCTTTAAGTTGTAGGACTAATTTGAAGAAAACACATTATATCTTAAATAGGACAGTGAAAGAAAAATCAACAGAATAAGCTAAAAGTTTTTTATGTTGAGATGCGTTCATCACTTTGCCTTTGATTTTTGTTTTGCTAGGCTGTTGAAGTATCTGAAGCTTCAATGAAGAACTTGCCTACCGCTGCCACTATTCTCTTTCAATATCTCATCAAACACAAATGGCTCACTTGGCCTAGGTGGATTCATAAATATTCTACTGTACAAGTTTTATATCTTTTAAATCAACTCTCTCTCAACAAATTAAAAGTGTACAACCAACCATCTCCATTTGAATATAATTTTGTTATATTTTGAGAACTAAACATGTCATTTGCATTTGTTTCTACAATACGGATTTAAGCATTTGAATCACGTACTTGTTGGTTTTTAAGATACATGCATGTATATATATATATATATATATACTTATATTCACTTGGTCTTGCAAATAAGTTTGTCGATCGACCCATCATTCATTGAACTTTATTTTAGTGGTTAAGTCTAAAAGAAAGGTATGTATGATCGACCCATCATTGATTGAACTTTATTTTAGTGGTTGAGTCTAAAAGAAAGGTATATATGAATTAACAGGGATCACATCTAAAGAGTTTTTAAGGATATAAAGTATGATTAGAAAAGGCTTACAAAAACTTAAGGCTATTACTAATACAAATTACAAAGTGCATTTTCTTTCGGTGCAATCCTAGAAGTTTGAGAGTGAAACATGTTAGATATTATATTAAATTTTCCTCCACCCATAAACTTAATCTTTTGGGTTGAATTGGTAATTTAAGAAACATACTTAGTTTGGAGCAATTATATTTTGGATGATCAATCGATAATTTTACTAAAAAGCAGTAAAGATAAAATATGAATTGTAGAGGTTGGTATTTTCACTTTTAAGAGCATTGGAAGACATAGATTTCTAATCTACTTTCCAATATCTTTTGAAAAATTTTAAAAAGTATTATATTCTCACGAAATTCGTTATATGTTTCCTTAATTTTAATTAAGAATCTAAAGACATCATTAGAAAAATAAAAACAGGTTAAAACAACCAAATTTTAGGAAATAGAACTTGTGAGGTAAATTTTAGATTCTTAGTGGGGGAAAAATCACATTAAGAGGCAATGAATCAATATACTTCAACCATATAAAATCAACATCTCAACTCACGTTTCTTAAATCACAATGATTTCATTACTTAAAACTCTTAAAAGAGAATGTACATTCTCTTCTAGGGAGAATTTCCAATAATTAAATGTATATTAATAATATGAAACTCAATTGATCAAATATTAAACCTATTATGATATAAAAGAAAAAAAAGAAAGAAATTTAAGAAATAAAAAAAATGATTGAACAATATTAATTGTTGGACCTTGGGATAGCTTAACTTTGAGGGCATCTAGTACACATATTCTTGGTTTACTTTATTCCATTTTTCCCTTTGTTCCAATTTTAAGCTCAATAAAGATATGTCTTTTAATATATATGTGTGTATGTATGTGTATATGTATGTGTGTATATTAGTGGGTTTTTTTTTTTTTAAATATAATAAATTGGTAAATATTTACATCGCAAAGAACAATTCTGAAAATGGAAAAATTCTACAGACCCACAATAGAAAATACCAATAAAATACATGTCATGGTCAACACACGCGATTATTCGACCACAACACTTGCGAGTATTCTTATTAAGAACGATTGTGTACTACAGTCATGATACACGATTGTGTAGTTCTTTTTTAACGATAAGGAAAATGGCTTCAAATTATACGAACGTGTTGACCATGACAAAAGTCGTGTTGATCAAGAAAAAAAATTATTGTGTTAATTATGGTAACAATTTCAATGTAAATATTTGTTAGGAATTCAAATCTAACAACCATATTAACTTTGGTAGGTGATCATTTAGATCATATCAACATGATTGTGTAGTTCTTCTTAAACTATGGAAAAAGAGTGAGCTTCATATTTAAACGATCGTGTAATTAGATCATGTCAAAACGATATTTAAATGATCGATATCTTGATATTCTTGAATATGAGGAAGATGAAGTAGCTTCAAACAATTTTGTCAAAAATGGTGAAGATGAAATAGAAGATTTAAACTGAAGAATAAAACGTACGTTTAAAAATACAAGAAAAACTAGAAGATAAGATGAAGAAATCCTAGAAGAGAAGATGAAGAAATCTAGAAAAGAAAATGAATAAATCTCAAATAAGAAGAAAGATAGGTGACAAATTGTTTGTAATATTCAAAAGCAAATCTGAAAATTATGAAAATATTTTACCGGCTTTATGAACATTTATGTAAATTATCCTATTCTTTGTGTCATTGGCCTTAAACCACTAATTCACCCAAAAGCTTAAGCAAGTGGATCAAGAAAATTTTAATTGAGGATAGTTGCAAATATAGAAATTTGATTCAAAATATATATTAGAATATATAACGAAGTCTATCAACGATAGAAGTCTCTCATTGATAGACGATGTAACAAATATTGGTTTATCATTGATAAACCATAAGAGTCTATCAGCAATAGAAGTCTATATATCATTGATAGACTTTTCTATATTTGCATTTTTTATAAAAAAAAAAGATGTCATATAATACATAATTAGGATTCTAAGACACAACAACTTCGTAGTTCCCATTTGCTTGTAATATATATCCTCCCACGATCTCAAATCGGATCACCAATAGAGCTAACTCACTATTCTCTAGACACAAAATCGAGTTGAGAGACCCAATGGGAAAGGGTTTGTGAGAGAGGGGGAGATGGAAATTTGGGAGAGAAGTAATCAAAATTACTTCAGAGGTGTGGTTTATAATTTAAAATTTTGGTGGGATTTTTAAGCAAGTAATAAAAATGGGCCACAACTCTTTTTACATTTGAAACAAAGCCTTTAAATAACCTATTTATATGCAAAAATGCATGTAATTAGTTTACTAAAATTACTTCAAACGTGTGGTTTGTAGGTTTTATTGTGAATGTAAGTGGTGGTCATCGATGTGCATTTAATTGACAGTGGGCTCCAATCGGGATGTTTCAATTTGATTAGAGTCGCTACATCGATGACTTGATGGCAAGACAATGAAGTTTCTAAAAGAATATTGAATTTTACCCTTCTTGTGTCTATTGTTAAGCTTGACGGTCTTGTTTTTGCAGTCCAAGCAGCGAAGATGTTAACACTAGGAGCCATCAAATCTCAAATGTGATAAAACTTGGTCCTCCATATGAAAACGCCGTCACCACCGGTGACTGTTGCTGGCTTTTTGGCCCTTAATCTCAAATTTATTTATTTTAATTATTCAATTAATTTATGTTTTGATGATAACAAATCTGATTTTTTTTATTGACAATTTTATTAATTTGAATAGACCATATCGTAGAGCTTGGAAAAATGATTCTAACGCCTCTTGAATCACCCAAATCGAAGTTCAAATGAAGAAAATATTGCTAAAAGAAGGTTAACGGAAAAATACCCGAGATGGTGACGTGGCGACCAAGCATTCAATTTGAACCAATTAGAGAAAGTCACTTGGAGCAATGAAGGAGTAACAAATGTGGCCTTTTGTTATGTTTTATTAGCTTTTATAAAAAAAATGAATTTAAAAAGAAAATGATTTTAATATTATTATTTTCCTTGTGTTTAACGGCTAGTTGTTTAAAAGATGGTGAAGTTGTTTTATTGATTTCTTTTTAAACAATGTATTTTGAAAAGACATATTATTATATTATTATTTGTATTGTGTCTAACGGCTAATTAAGTTTAAATCTCAACCATTCATTTTTCTTTTACTTATATCTAATGACCCAAATGATTTTGAATTTATCTTTCCTCTCTTTTTAAATACTTCACATTTACACAAGATCAAAAATATCTTTACAATCCTCAAGCAAAAAGCCAACATTGTTATTCTCTCTAAAGCTTCCAATTTTTATTCTTTTCATCTTATTCTTGAGAGCTTCTTATTGTATTGTGAGGATTAAATTTGTGAGCTTCAAATTGTATACTCACTCTTTTAGAGAGTTTTCTTTTGTATGATTTAAAAACTTCAACATATTGTAACGGTTGGATCCTAACCCGTGGAAAGGATCGGGTTTGCTCTTGAACCCGAAAAAGGAGCAAGAATCGGTTCGGCTCAAATCCGTGGAAAGAGTCCAAAGAAGATTTTCAATCAAAATCCCAAGAGGTGCTTGGGAAAGTGGATGTAGGTTGAGTTTAACCGAACCACTATAAAATTACGGTGTCTTCTTCTCTAACTCTTTTCTAATTATTTTTTAATTTAATTTTAGTTACATACTCTTATTGGTTGAGTTTGATTGCATACTTTCATTCATATATTTTTATCAATCTTGTTATTTAACAAAGTTTACAAAGTTCTTTATTTAAATTTAAAAAGTATCTAATTAGTTGATTTTACTTTTTATTTGTCAAAAAGTTTATTTAAACCCTATTCACCCCCTCTAGGGTTGCCATACCGATCCAACAACTGTTTTACCTCTAATCTTGTCCCTACAAAAGCCTAATGTGGTAAAGTTGTGATTTTGCTTATCCCTATAAAGTTCTACGTAGACATTTTTTCATTAGGAAACCCTAATCACTTGGTGTAGTGATCTTGCTTACAACTACCTTCATTGTAATTTACCTCAAGAACGGGCTTCAACACGGCTAAGAACAATATAAGATCTTTTTTTTTTTTTGTTGATGTCCTCAATTATTCCTCTAATAAAGTTTAGTAAATCTTGCAGCTCTCTTCTTGTTAATCAGTTGTCAGGATAAATATCATCAGACGCTTTAGGAAATATTACCTACTCAAACATCACTATAAGTTGTCATAGTACTATATTCATTCTCTTTTTTCTGTTTTTAGGGTATGGTGTTTTGGTTTTTGATTATTTGAAGAGTGCATATTTTAATAGAAACGTTACATTATTACTTGTCATATTATCACTTTGA ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAGAGATGAGGAGATGATCGATACAATGCAACATCCTATCGAGATTGGCACACTCCTAACATTCAACATAATTAAGCTTATGGCTGTTGAAGTATCTGAAGCTTCAATGAAGAACTTGCCTACCGCTGCCACTATTCTCTTTCAATATCTCATCAAACACAAATGGCTCACTTGGCCTAGTCCAAGCAGCGAAGATGTTAACACTAGGAGCCATCAAATCTCAAATGTGATAAAACTTGGTCCTCCATATGAAAACGCCGTCACCACCGGGTATGGTGTTTTGGTTTTTGATTATTTGAAGAGTGCATATTTTAATAGAAACGTTACATTATTACTTGTCATATTATCACTTTGA ATGGCTTCGAGCTCTTTGAAGCAGCAACGACCAGAGACGACATGGACGCCAAAGCAAAACAAGCTGTTCGAGAAAGCATTGGCATTGTACGACAAAGATACACCTGAGAGATGGCAAAATATCGCCACTGCAGTAGGCGGGAAGTCGGCCGATGAAGTTCAAAGACACTATGAGATACTCTTGGAAGACCTCCGGCGGATCGAGTCCGGTCGTGTTCCTATTCCCAATTACCGACGCACTAGCAATCGAGATGAAGAGTTGAGAGATGAGGAGATGATCGATACAATGCAACATCCTATCGAGATTGGCACACTCCTAACATTCAACATAATTAAGCTTATGGCTGTTGAAGTATCTGAAGCTTCAATGAAGAACTTGCCTACCGCTGCCACTATTCTCTTTCAATATCTCATCAAACACAAATGGCTCACTTGGCCTAGTCCAAGCAGCGAAGATGTTAACACTAGGAGCCATCAAATCTCAAATGTGATAAAACTTGGTCCTCCATATGAAAACGCCGTCACCACCGGGTATGGTGTTTTGGTTTTTGATTATTTGAAGAGTGCATATTTTAATAGAAACGTTACATTATTACTTGTCATATTATCACTTTGA MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEILLEDLRRIESGRVPIPNYRRTSNRDEELRDEEMIDTMQHPIEIGTLLTFNIIKLMAVEVSEASMKNLPTAATILFQYLIKHKWLTWPSPSSEDVNTRSHQISNVIKLGPPYENAVTTGYGVLVFDYLKSAYFNRNVTLLLVILSL* Homology
BLAST of CsaV3_7G000070 vs. NCBI nr
Match: KGN43156.2 (hypothetical protein Csa_020475 [Cucumis sativus]) HSP 1 Score: 405.6 bits (1041), Expect = 2.5e-109 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. NCBI nr
Match: XP_004151090.1 (protein RADIALIS-like 3 [Cucumis sativus]) HSP 1 Score: 179.1 bits (453), Expect = 3.9e-41 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. NCBI nr
Match: KAA0055424.1 (protein RADIALIS-like 3 [Cucumis melo var. makuwa] >TYK22307.1 protein RADIALIS-like 3 [Cucumis melo var. makuwa]) HSP 1 Score: 176.8 bits (447), Expect = 1.9e-40 Identity = 87/98 (88.78%), Postives = 93/98 (94.90%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. NCBI nr
Match: XP_008447023.1 (PREDICTED: protein RADIALIS-like 3 [Cucumis melo]) HSP 1 Score: 174.9 bits (442), Expect = 7.3e-40 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. NCBI nr
Match: XP_038888996.1 (protein RADIALIS-like 3 isoform X2 [Benincasa hispida]) HSP 1 Score: 159.8 bits (403), Expect = 2.4e-35 Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-22 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.5e-22 Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.8e-20 Identity = 42/66 (63.64%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy TrEMBL
Match: A0A0A0K2A2 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G000020 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy TrEMBL
Match: A0A5D3DF44 (Protein RADIALIS-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00100 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 9.3e-41 Identity = 87/98 (88.78%), Postives = 93/98 (94.90%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy TrEMBL
Match: A0A1S3BHB0 (protein RADIALIS-like 3 OS=Cucumis melo OX=3656 GN=LOC103489572 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.5e-40 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy TrEMBL
Match: A0A6J1C2H2 (protein RADIALIS-like 3 OS=Momordica charantia OX=3673 GN=LOC111007854 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 3.8e-34 Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. ExPASy TrEMBL
Match: A0A6J1GKW1 (protein RADIALIS-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111455298 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 3.8e-34 Identity = 77/88 (87.50%), Postives = 79/88 (89.77%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 ) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 ) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 ) HSP 1 Score: 106.3 bits (264), Expect = 3.0e-23 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 ) HSP 1 Score: 105.9 bits (263), Expect = 3.9e-23 Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of CsaV3_7G000070 vs. TAIR 10
Match: AT2G18328.1 (RAD-like 4 ) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21 Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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