CsaV3_6G053160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G053160
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 31022046 .. 31022463 (-)
RNA-Seq ExpressionCsaV3_6G053160
SyntenyCsaV3_6G053160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTGTGAAGTGCAAAAATGGGAATAGAATGATTCGGTGGCGGGGTGATTTAAGGGGTGTCAATGTCATTGGGGTTCAGAGTTGGGCCCTCCCCACAGCCAATCCTGTGCTGTAAATCTGAATCTGTAGCGGCAGAGGAACCTCTACTTAACGCGTGGCCTCTCTCTCTTTCATTTTCCCACTACATGCCCCTCTAGGATTGATTTCCGTCGTCGGTGCTTTCTTTCCTTTTTTTTCTTTTTTTTTTTTCTTTCTTTTGGTAAGAACTCCAGAGTATTGTTTTTTATGTTTTTTTTTTCTTTTTCAATTATCAAATCAGGCCTCTTCTAACTCTACCACCCCCATCCATTTTCCTCCTCATTTCAAACATCCATGACCTGATAGACCTTCGTCTCCATCTCCCCAAGAAATGA

mRNA sequence

ATGGAGGGTGTGAAGTGCAAAAATGGGAATAGAATGATTCGGTGGCGGGGTGATTTAAGGGGTGTCAATGTCATTGGGGTTCAGAGTTGGGCCCTCCCCACAGCCAATCCTGTGCTGCCTCTTCTAACTCTACCACCCCCATCCATTTTCCTCCTCATTTCAAACATCCATGACCTGATAGACCTTCGTCTCCATCTCCCCAAGAAATGA

Coding sequence (CDS)

ATGGAGGGTGTGAAGTGCAAAAATGGGAATAGAATGATTCGGTGGCGGGGTGATTTAAGGGGTGTCAATGTCATTGGGGTTCAGAGTTGGGCCCTCCCCACAGCCAATCCTGTGCTGCCTCTTCTAACTCTACCACCCCCATCCATTTTCCTCCTCATTTCAAACATCCATGACCTGATAGACCTTCGTCTCCATCTCCCCAAGAAATGA

Protein sequence

MEGVKCKNGNRMIRWRGDLRGVNVIGVQSWALPTANPVLPLLTLPPPSIFLLISNIHDLIDLRLHLPKK*
Homology
[Close]
BLAST of CsaV3_6G053160 vs. NCBI nr
Match: KGN49545.1 (hypothetical protein Csa_004122 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MEGVKCKNGNRMIRWRGDLRGVNVIGVQSWALPTANPVLPLLTLPPPSIFLLISNIHDLI 60
          MEGVKCKNGNRMIRWRGDLRGVNVIGVQSWALPTANPVLPLLTLPPPSIFLLISNIHDLI
Sbjct: 1  MEGVKCKNGNRMIRWRGDLRGVNVIGVQSWALPTANPVLPLLTLPPPSIFLLISNIHDLI 60

Query: 61 DLRLHLPKK 70
          DLRLHLPKK
Sbjct: 61 DLRLHLPKK 69

[Close]
BLAST of CsaV3_6G053160 vs. ExPASy TrEMBL
Match: A0A0A0KIL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538740 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.8e-32
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MEGVKCKNGNRMIRWRGDLRGVNVIGVQSWALPTANPVLPLLTLPPPSIFLLISNIHDLI 60
          MEGVKCKNGNRMIRWRGDLRGVNVIGVQSWALPTANPVLPLLTLPPPSIFLLISNIHDLI
Sbjct: 1  MEGVKCKNGNRMIRWRGDLRGVNVIGVQSWALPTANPVLPLLTLPPPSIFLLISNIHDLI 60

Query: 61 DLRLHLPKK 70
          DLRLHLPKK
Sbjct: 61 DLRLHLPKK 69

The following BLAST results are available for this feature:
BLAST of CsaV3_6G053160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49545.11.6e-31100.00hypothetical protein Csa_004122 [Cucumis sativus][more]
BLAST of CsaV3_6G053160 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G053160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIL47.8e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538740 PE=4 SV=1[more]
BLAST of CsaV3_6G053160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G053160.1CsaV3_6G053160.1mRNA